Should you encounter any unexpected behaviour,
please let us know.

* 1JSF_I56T *

B-factor analysis for ID 2503181345223310838

Overall B-factor prediction

Correlation= 0.626 for 130 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA LYS 1 0.0064 15.4611 18.2500
26 CA VAL 2 0.0065 15.5267 14.6600
42 CA PHE 3 0.0033 13.6214 12.2900
62 CA GLU 4 0.0070 15.8535 16.5500
77 CA ARG 5 0.0036 13.8332 13.7000
101 CA CYS 6 0.0039 13.9809 12.4200
111 CA GLU 7 0.0041 14.0752 12.0700
126 CA LEU 8 0.0018 12.7296 10.9000
145 CA ALA 9 0.0020 12.8361 11.3600
155 CA ARG 10 0.0038 13.9106 12.2600
179 CA THR 11 0.0026 13.2038 11.6000
193 CA LEU 12 0.0017 12.6649 11.1800
212 CA LYS 13 0.0038 13.9388 11.9700
234 CA ARG 14 0.0094 17.2783 12.9600
258 CA LEU 15 0.0040 14.0479 11.7100
277 CA GLY 16 0.0047 14.4789 13.4800
284 CA MET 17 0.0021 12.9174 11.6000
301 CA ASP 18 0.0038 13.8982 14.4100
313 CA GLY 19 0.0079 16.3746 15.0500
320 CA TYR 20 0.0038 13.9366 11.9500
341 CA ARG 21 0.0071 15.9062 14.2800
365 CA GLY 22 0.0259 27.1006 12.7600
372 CA ILE 23 0.0032 13.5509 11.7700
391 CA SER 24 0.0037 13.8740 11.9700
402 CA LEU 25 0.0021 12.9112 12.2300
421 CA ALA 26 0.0024 13.0691 12.1600
431 CA ASN 27 0.0018 12.7489 11.7200
445 CA TRP 28 0.0012 12.4008 10.7700
469 CA MET 29 0.0014 12.4997 10.6100
486 CA CYS 30 0.0018 12.7203 11.4700
496 CA LEU 31 0.0015 12.5682 12.2700
515 CA ALA 32 0.0017 12.6422 11.1200
525 CA LYS 33 0.0028 13.3366 12.8800
547 CA TRP 34 0.0048 14.5282 13.4600
571 CA GLU 35 0.0026 13.1945 13.1100
586 CA SER 36 0.0032 13.5390 13.2500
597 CA GLY 37 0.0044 14.2646 14.6200
604 CA TYR 38 0.0027 13.2609 12.4100
625 CA ASN 39 0.0037 13.8677 13.0000
639 CA THR 40 0.0030 13.4636 12.6800
653 CA ARG 41 0.0055 14.9519 16.4600
677 CA ALA 42 0.0041 14.1174 15.2400
687 CA THR 43 0.0060 15.2604 16.6300
701 CA ASN 44 0.0108 18.0866 17.3600
715 CA TYR 45 0.0128 19.2655 19.2600
736 CA ASN 46 0.0154 20.8613 18.0700
750 CA ALA 47 0.0333 31.4866 23.8000
760 CA GLY 48 0.0624 48.8294 22.0700
767 CA ASP 49 0.0213 24.3553 20.3500
779 CA ARG 50 0.0136 19.7546 19.6800
803 CA SER 51 0.0059 15.1965 15.6200
814 CA THR 52 0.0040 14.0229 11.9400
828 CA ASP 53 0.0033 13.5983 12.5900
840 CA TYR 54 0.0025 13.1407 11.1000
861 CA GLY 55 0.0023 13.0281 11.2200
868 CA THR 56 0.0018 12.7142 11.0600
882 CA PHE 57 0.0015 12.5680 11.5800
902 CA GLN 58 0.0024 13.0767 11.5900
919 CA ILE 59 0.0018 12.7102 12.6900
938 CA ASN 60 0.0029 13.3661 12.2300
952 CA SER 61 0.0025 13.1684 12.0900
963 CA ARG 62 0.0053 14.8387 16.6100
987 CA TYR 63 0.0052 14.7798 17.9700
1008 CA TRP 64 0.0025 13.1486 13.1500
1032 CA CYS 65 0.0024 13.0618 12.6000
1042 CA ASN 66 0.0045 14.3669 12.0700
1056 CA ASP 67 0.0064 15.4525 13.4200
1068 CA GLY 68 0.0265 27.4282 14.7100
1075 CA LYS 69 0.0152 20.6981 17.6000
1097 CA THR 70 0.0075 16.1319 18.0100
1111 CA PRO 71 0.0200 23.5575 23.9600
1125 CA GLY 72 0.0356 32.8695 31.9800
1132 CA ALA 73 0.0084 16.6653 26.1000
1142 CA VAL 74 0.0116 18.5550 27.9900
1158 CA ASN 75 0.0056 15.0104 17.5800
1172 CA ALA 76 0.0058 15.1120 15.8400
1182 CA CYS 77 0.0038 13.8994 15.1500
1192 CA HIS 78 0.0128 19.2937 16.7100
1209 CA LEU 79 0.0047 14.4363 16.1400
1228 CA SER 80 0.0064 15.4523 13.2300
1239 CA CYS 81 0.0029 13.3914 11.8200
1249 CA SER 82 0.0065 15.5088 13.5400
1260 CA ALA 83 0.0045 14.3570 12.5600
1270 CA LEU 84 0.0022 12.9871 12.7100
1289 CA LEU 85 0.0039 13.9781 13.5400
1308 CA GLN 86 0.0053 14.8324 14.0100
1325 CA ASP 87 0.0066 15.5689 14.6100
1337 CA ASN 88 0.0069 15.7754 17.7900
1351 CA ILE 89 0.0025 13.1370 12.7000
1370 CA ALA 90 0.0045 14.3502 11.8800
1380 CA ASP 91 0.0038 13.9384 13.0600
1392 CA ALA 92 0.0020 12.8415 12.9200
1402 CA VAL 93 0.0021 12.9100 11.5800
1418 CA ALA 94 0.0028 13.3354 14.0300
1428 CA CYS 95 0.0022 12.9440 11.4600
1438 CA ALA 96 0.0017 12.6836 11.0900
1448 CA LYS 97 0.0025 13.1621 11.6700
1470 CA ARG 98 0.0033 13.6137 12.8700
1494 CA VAL 99 0.0023 13.0020 12.3300
1510 CA VAL 100 0.0026 13.2248 12.6500
1526 CA ARG 101 0.0053 14.7976 17.7800
1550 CA ASP 102 0.0069 15.7701 18.6000
1562 CA PRO 103 0.0215 24.4988 24.3900
1576 CA GLN 104 0.0102 17.7566 21.2300
1593 CA GLY 105 0.0043 14.2200 17.9100
1600 CA ILE 106 0.0025 13.1527 17.1100
1619 CA ARG 107 0.0051 14.6939 17.1300
1643 CA ALA 108 0.0048 14.5309 21.5800
1653 CA TRP 109 0.0033 13.6190 16.7900
1677 CA VAL 110 0.0091 17.0613 20.7700
1693 CA ALA 111 0.0054 14.8852 20.0800
1703 CA TRP 112 0.0033 13.6262 14.2700
1727 CA ARG 113 0.0068 15.7078 16.4300
1751 CA ASN 114 0.0106 17.9782 17.9900
1765 CA ARG 115 0.0064 15.4814 17.3800
1789 CA CYS 116 0.0040 14.0504 14.6700
1799 CA GLN 117 0.0076 16.2143 18.2000
1816 CA ASN 118 0.0289 28.8623 28.5500
1830 CA ARG 119 0.0136 19.7785 29.4100
1854 CA ASP 120 0.0218 24.6426 27.3500
1866 CA VAL 121 0.0048 14.4978 21.1300
1882 CA ARG 122 0.0100 17.6185 27.6500
1906 CA GLN 123 0.0080 16.4535 28.1900
1923 CA TYR 124 0.0029 13.3859 20.5700
1944 CA VAL 125 0.0035 13.7684 19.0400
1960 CA GLN 126 0.0117 18.6485 29.0600
1977 CA GLY 127 0.0318 30.5836 25.3300
1984 CA CYS 128 0.0071 15.9093 20.3700
1994 CA GLY 129 0.0243 26.1368 29.2900
2001 CA VAL 130 0.0081 16.4964 25.2700

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.

Should you encounter any unexpected behaviour, please let us know.