CNRS Nantes University US2B US2B
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***  NMDA  ***

<R2> analysis for 2503131542382221122

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1003
LYS 250.0153
ILE 260.0137
VAL 270.0126
ASN 280.0110
ILE 290.0097
GLY 300.0082
ALA 310.0072
VAL 320.0058
LEU 330.0063
SER 340.0061
THR 350.0073
ARG 360.0084
LYS 370.0097
HIS 380.0089
GLU 390.0088
GLN 400.0104
MET 410.0108
PHE 420.0100
ARG 430.0110
GLU 440.0123
ALA 450.0119
VAL 460.0118
ASN 470.0133
GLN 480.0139
ALA 490.0134
ASN 500.0142
LYS 510.0156
ARG 520.0156
HIS 530.0158
GLN 590.0147
LEU 600.0131
ASN 610.0119
ALA 620.0104
THR 630.0090
SER 640.0077
VAL 650.0063
THR 660.0056
HIS 670.0041
LYS 680.0032
PRO 690.0029
ASN 700.0020
ALA 710.0017
ILE 720.0022
GLN 730.0019
MET 740.0024
ALA 750.0031
LEU 760.0035
SER 770.0039
VAL 780.0047
CYS 790.0054
GLU 800.0057
ASP 810.0063
LEU 820.0072
ILE 830.0076
SER 840.0080
SER 850.0090
GLN 860.0097
VAL 870.0093
TYR 880.0099
ALA 890.0086
ILE 900.0072
LEU 910.0070
VAL 920.0055
SER 930.0053
HIS 940.0044
PRO 950.0047
PRO 960.0059
THR 970.0052
PRO 980.0047
ASN 990.0034
ASP 1000.0023
HIS 1010.0017
PHE 1020.0020
THR 1030.0027
PRO 1040.0030
THR 1050.0028
PRO 1060.0031
VAL 1070.0041
SER 1080.0047
TYR 1090.0050
THR 1100.0055
ALA 1110.0065
GLY 1120.0070
PHE 1130.0075
TYR 1140.0086
ARG 1150.0087
ILE 1160.0084
PRO 1170.0080
VAL 1180.0067
LEU 1190.0067
GLY 1200.0054
LEU 1210.0060
THR 1220.0051
THR 1230.0036
ARG 1240.0031
MET 1250.0020
SER 1260.0025
ILE 1270.0030
TYR 1280.0037
SER 1290.0045
ASP 1300.0053
LYS 1310.0066
SER 1320.0072
ILE 1330.0060
HIS 1340.0057
LEU 1350.0072
SER 1360.0072
PHE 1370.0061
LEU 1380.0068
ARG 1390.0060
THR 1400.0068
VAL 1410.0057
PRO 1420.0048
PRO 1430.0033
TYR 1440.0024
SER 1450.0022
HIS 1460.0033
GLN 1470.0029
SER 1480.0022
SER 1490.0033
VAL 1500.0038
TRP 1510.0027
PHE 1520.0028
GLU 1530.0041
MET 1540.0040
MET 1550.0028
ARG 1560.0036
VAL 1570.0048
TYR 1580.0044
SER 1590.0031
TRP 1600.0024
ASN 1610.0017
HIS 1620.0026
ILE 1630.0028
ILE 1640.0038
LEU 1650.0034
LEU 1660.0043
VAL 1670.0038
SER 1680.0044
ASP 1690.0050
ASP 1700.0039
HIS 1710.0034
GLU 1720.0022
GLY 1730.0027
ARG 1740.0036
ALA 1750.0030
ALA 1760.0021
GLN 1770.0028
LYS 1780.0038
ARG 1790.0033
LEU 1800.0025
GLU 1810.0036
THR 1820.0046
LEU 1830.0040
LEU 1840.0033
GLU 1850.0046
GLU 1860.0052
ARG 1870.0042
GLU 1880.0045
SER 1890.0033
LYS 1900.0036
ALA 1910.0032
GLU 1920.0042
LYS 1930.0050
VAL 1940.0048
LEU 1950.0057
GLN 1960.0057
PHE 1970.0061
ASP 1980.0066
PRO 1990.0058
GLY 2000.0070
THR 2010.0082
LYS 2020.0091
ASN 2030.0097
VAL 2040.0086
THR 2050.0096
ALA 2060.0098
LEU 2070.0083
LEU 2080.0081
MET 2090.0093
GLU 2100.0084
ALA 2110.0071
LYS 2120.0080
GLU 2130.0080
LEU 2140.0064
GLU 2150.0053
ALA 2160.0043
ARG 2170.0051
VAL 2180.0042
ILE 2190.0043
ILE 2200.0032
LEU 2210.0037
SER 2220.0030
ALA 2230.0038
SER 2240.0042
GLU 2250.0055
ASP 2260.0064
ASP 2270.0060
ALA 2280.0059
ALA 2290.0075
THR 2300.0079
VAL 2310.0073
TYR 2320.0079
ARG 2330.0093
ALA 2340.0092
ALA 2350.0086
ALA 2360.0098
MET 2370.0109
LEU 2380.0101
ASN 2390.0098
MET 2400.0081
THR 2410.0084
GLY 2420.0091
SER 2430.0085
GLY 2440.0070
TYR 2450.0064
VAL 2460.0055
TRP 2470.0052
LEU 2480.0041
VAL 2490.0042
GLY 2500.0036
GLU 2510.0045
ARG 2520.0043
GLU 2530.0049
ILE 2540.0062
SER 2550.0066
GLY 2560.0075
ASN 2570.0081
ALA 2580.0074
LEU 2590.0082
ARG 2600.0096
TYR 2610.0092
ALA 2620.0082
PRO 2630.0088
ASP 2640.0092
GLY 2650.0079
ILE 2660.0068
LEU 2670.0059
GLY 2680.0056
LEU 2690.0053
GLN 2700.0061
LEU 2710.0064
ILE 2720.0080
ASN 2730.0084
GLY 2740.0068
LYS 2750.0070
ASN 2760.0084
GLU 2770.0080
SER 2780.0095
ALA 2790.0098
HIS 2800.0084
ILE 2810.0089
SER 2820.0105
ASP 2830.0101
ALA 2840.0092
VAL 2850.0103
GLY 2860.0115
VAL 2870.0108
VAL 2880.0106
ALA 2890.0122
GLN 2900.0128
ALA 2910.0122
VAL 2920.0127
HIS 2930.0142
GLU 2940.0143
LEU 2950.0138
LEU 2960.0149
GLU 2970.0162
LYS 2980.0159
GLU 2990.0165
ASN 3000.0161
ILE 3010.0144
THR 3020.0136
ASP 3030.0125
PRO 3040.0108
PRO 3050.0103
ARG 3060.0099
GLY 3070.0087
CYS 3080.0075
VAL 3090.0075
GLY 3100.0090
ASN 3110.0096
THR 3120.0099
ASN 3130.0109
ILE 3140.0106
TRP 3150.0110
LYS 3160.0124
THR 3170.0123
GLY 3180.0107
PRO 3190.0108
LEU 3200.0120
PHE 3210.0112
LYS 3220.0098
ARG 3230.0108
VAL 3240.0116
LEU 3250.0102
MET 3260.0095
SER 3270.0108
SER 3280.0115
LYS 3290.0115
TYR 3300.0116
ALA 3310.0121
ASP 3320.0128
GLY 3330.0115
VAL 3340.0113
THR 3350.0099
GLY 3360.0105
ARG 3370.0104
VAL 3380.0095
GLU 3390.0092
PHE 3400.0082
ASN 3410.0077
GLU 3420.0081
ASP 3430.0067
GLY 3440.0070
ASP 3450.0061
ARG 3460.0068
LYS 3470.0071
PHE 3480.0075
ALA 3490.0070
ASN 3500.0074
TYR 3510.0064
SER 3520.0072
ILE 3530.0067
MET 3540.0075
ASN 3550.0079
LEU 3560.0087
GLN 3570.0102
ASN 3580.0115
ARG 3590.0107
LYS 3600.0105
LEU 3610.0093
VAL 3620.0097
GLN 3630.0092
VAL 3640.0086
GLY 3650.0080
ILE 3660.0079
TYR 3670.0069
ASN 3680.0076
GLY 3690.0071
THR 3700.0065
HIS 3710.0068
VAL 3720.0066
ILE 3730.0080
PRO 3740.0083
ASN 3750.0098
ASP 3760.0108
ARG 3770.0105
LYS 3780.0101
ILE 3790.0086
ILE 3800.0090
TRP 3810.0078
PRO 3820.0083
GLY 3830.0095
GLY 3840.0101
GLU 3850.0091
THR 3860.0091
GLU 3870.0077
LYS 3880.0062
PRO 3890.0059
ARG 3900.0044
GLY 3910.0045
TYR 3920.0042
GLN 3930.0054
MET 3940.0052
SER 3950.0061
THR 3960.0058
ARG 3970.0067
LEU 3980.0063
LYS 3990.0072
ILE 4000.0071
VAL 4010.0078
THR 4020.0080
ILE 4030.0087
HIS 4040.0092
GLN 4050.0089
GLU 4060.0091
PRO 4070.0083
PHE 4080.0076
VAL 4090.0081
TYR 4100.0089
VAL 4110.0096
LYS 4120.0103
PRO 4130.0111
THR 4140.0109
LEU 4150.0115
SER 4160.0123
ASP 4170.0118
GLY 4180.0112
THR 4190.0103
CYS 4200.0101
LYS 4210.0100
GLU 4220.0091
GLU 4230.0088
PHE 4240.0080
THR 4250.0073
VAL 4260.0072
ASN 4270.0062
GLY 4280.0068
ASP 4290.0064
PRO 4300.0072
VAL 4310.0074
LYS 4320.0072
LYS 4330.0080
VAL 4340.0082
ILE 4350.0091
CYS 4360.0091
THR 4370.0097
GLY 4380.0102
PRO 4390.0111
ASN 4400.0117
ASP 4410.0123
THR 4420.0119
SER 4430.0127
PRO 4440.0126
GLY 4450.0131
SER 4460.0131
PRO 4470.0130
ARG 4480.0121
HIS 4490.0120
THR 4500.0111
VAL 4510.0113
PRO 4520.0105
GLN 4530.0103
CYS 4540.0095
CYS 4550.0088
TYR 4560.0080
GLY 4570.0074
PHE 4580.0066
CYS 4590.0065
ILE 4600.0067
ASP 4610.0060
LEU 4620.0053
LEU 4630.0057
ILE 4640.0057
LYS 4650.0047
LEU 4660.0045
ALA 4670.0052
ARG 4680.0049
THR 4690.0040
MET 4700.0042
ASN 4710.0050
PHE 4720.0056
THR 4730.0067
TYR 4740.0069
GLU 4750.0079
VAL 4760.0080
HIS 4770.0088
LEU 4780.0091
VAL 4790.0093
ALA 4800.0103
ASP 4810.0103
GLY 4820.0101
LYS 4830.0097
PHE 4840.0088
GLY 4850.0089
THR 4860.0089
GLN 4870.0089
GLU 4880.0098
ARG 4890.0102
VAL 4900.0103
ASN 4910.0114
ASN 4920.0117
SER 4930.0107
ASN 4940.0101
LYS 4950.0093
LYS 4960.0089
GLU 4970.0089
TRP 4980.0085
ASN 4990.0091
GLY 5000.0090
MET 5010.0081
MET 5020.0076
GLY 5030.0081
GLU 5040.0081
LEU 5050.0071
LEU 5060.0069
SER 5070.0076
GLY 5080.0071
GLN 5090.0079
ALA 5100.0072
ASP 5110.0062
MET 5120.0060
ILE 5130.0066
VAL 5140.0064
ALA 5150.0071
PRO 5160.0072
LEU 5170.0071
THR 5180.0072
ILE 5190.0065
ASN 5200.0071
ASN 5210.0069
GLU 5220.0073
ARG 5230.0069
ALA 5240.0059
GLN 5250.0060
TYR 5260.0060
ILE 5270.0056
GLU 5280.0047
PHE 5290.0049
SER 5300.0043
LYS 5310.0041
PRO 5320.0050
PHE 5330.0049
LYS 5340.0057
TYR 5350.0063
GLN 5360.0072
GLY 5370.0080
LEU 5380.0090
THR 5390.0096
ILE 5400.0105
LEU 5410.0107
VAL 5420.0116
LYS 5430.0121
LYS 5440.0119
GLU 5450.0126
ILE 5460.0126
PRO 5470.0131
ARG 5480.0115
SER 5490.0112
THR 5500.0098
LEU 5510.0090
ASP 5520.0078
SER 5530.0062
PHE 5540.0058
MET 5550.0055
GLN 5560.0052
PRO 5570.0050
PHE 5580.0058
GLN 5590.0066
SER 5600.0069
THR 5610.0086
LEU 5620.0075
TRP 5630.0068
LEU 5640.0089
LEU 5650.0095
VAL 5660.0078
GLY 5670.0090
LEU 5680.0110
SER 5690.0102
VAL 5700.0090
HIS 5710.0112
VAL 5720.0125
VAL 5730.0109
ALA 5740.0108
VAL 5750.0134
MET 5760.0135
LEU 5770.0117
TYR 5780.0132
LEU 5790.0153
LEU 5800.0141
ASP 5810.0130
ARG 5820.0156
THR 6020.0126
LEU 6030.0126
SER 6040.0126
SER 6050.0107
ALA 6060.0093
MET 6070.0098
TRP 6080.0093
PHE 6090.0073
SER 6100.0067
TRP 6110.0072
GLY 6120.0067
VAL 6130.0050
LEU 6140.0049
LEU 6150.0058
ASN 6160.0060
SER 6170.0074
GLY 6180.0065
ILE 6190.0077
GLY 6200.0065
GLU 6210.0079
GLY 6220.0070
ALA 6230.0074
PRO 6240.0083
ARG 6250.0099
SER 6260.0107
PHE 6270.0099
SER 6280.0114
ALA 6290.0100
ARG 6300.0080
ILE 6310.0094
LEU 6320.0096
GLY 6330.0073
MET 6340.0071
VAL 6350.0088
TRP 6360.0075
ALA 6370.0059
GLY 6380.0076
PHE 6390.0079
ALA 6400.0059
MET 6410.0066
ILE 6420.0081
ILE 6430.0066
VAL 6440.0060
ALA 6450.0080
SER 6460.0079
TYR 6470.0062
THR 6480.0077
ALA 6490.0091
ASN 6500.0075
LEU 6510.0075
ALA 6520.0099
ALA 6530.0097
PHE 6540.0080
LEU 6550.0102
VAL 6560.0123
LEU 6570.0107
ASP 6580.0115
ARG 6590.0122
PRO 6600.0114
GLU 6610.0124
GLU 6620.0126
ARG 6630.0119
ILE 6640.0119
THR 6650.0112
GLY 6660.0108
ILE 6670.0111
ASN 6680.0114
ASP 6690.0121
PRO 6700.0130
ARG 6710.0133
LEU 6720.0125
ARG 6730.0127
ASN 6740.0136
PRO 6750.0137
SER 6760.0145
ASP 6770.0148
LYS 6780.0149
PHE 6790.0140
ILE 6800.0133
TYR 6810.0124
ALA 6820.0119
THR 6830.0110
VAL 6840.0106
LYS 6850.0107
GLN 6860.0099
SER 6870.0093
SER 6880.0087
VAL 6890.0094
ASP 6900.0100
ILE 6910.0093
TYR 6920.0093
PHE 6930.0103
ARG 6940.0103
ARG 6950.0096
GLN 6960.0100
VAL 6970.0109
GLU 6980.0114
LEU 6990.0117
SER 7000.0121
THR 7010.0129
MET 7020.0123
TYR 7030.0118
ARG 7040.0127
HIS 7050.0130
MET 7060.0122
GLU 7070.0123
LYS 7080.0132
HIS 7090.0128
ASN 7100.0120
TYR 7110.0118
GLU 7120.0115
SER 7130.0108
ALA 7140.0104
ALA 7150.0108
GLU 7160.0117
ALA 7170.0116
ILE 7180.0112
GLN 7190.0120
ALA 7200.0126
VAL 7210.0122
ARG 7220.0122
ASP 7230.0132
ASN 7240.0135
LYS 7250.0136
LEU 7260.0130
HIS 7270.0129
ALA 7280.0120
PHE 7290.0112
ILE 7300.0105
TRP 7310.0096
ASP 7320.0086
SER 7330.0084
ALA 7340.0078
VAL 7350.0086
LEU 7360.0093
GLU 7370.0088
PHE 7380.0086
GLU 7390.0096
ALA 7400.0098
SER 7410.0091
GLN 7420.0094
LYS 7430.0103
CYS 7440.0105
ASP 7450.0113
LEU 7460.0110
VAL 7470.0105
THR 7480.0101
THR 7490.0104
GLY 7500.0103
GLU 7510.0096
LEU 7520.0088
PHE 7530.0089
PHE 7540.0084
ARG 7550.0076
SER 7560.0069
GLY 7570.0064
PHE 7580.0063
GLY 7590.0056
ILE 7600.0054
GLY 7610.0058
MET 7620.0054
ARG 7630.0051
LYS 7640.0042
ASP 7650.0039
SER 7660.0040
PRO 7670.0034
TRP 7680.0036
LYS 7690.0033
GLN 7700.0024
ASN 7710.0026
VAL 7720.0034
SER 7730.0032
LEU 7740.0024
SER 7750.0028
ILE 7760.0035
LEU 7770.0030
LYS 7780.0024
SER 7790.0032
HIS 7800.0036
GLU 7810.0028
ASN 7820.0025
GLY 7830.0033
PHE 7840.0038
MET 7850.0045
GLU 7860.0046
ASP 7870.0047
LEU 7880.0054
ASP 7890.0059
LYS 7900.0059
THR 7910.0063
TRP 7920.0069
VAL 7930.0072
ARG 7940.0069
TYR 7950.0071
GLN 7960.0080
GLU 7970.0085
CYS 7980.0093
LEU 8080.0139
THR 8090.0137
PHE 8100.0127
GLU 8110.0105
ASN 8120.0067
MET 8130.0090
ALA 8140.0133
GLY 8150.0112
VAL 8160.0123
PHE 8170.0167
MET 8180.0212
LEU 8190.0210
VAL 8200.0233
ALA 8210.0286
GLY 8220.0317
GLY 8230.0333
ILE 8240.0370
VAL 8250.0430
ALA 8260.0445
GLY 8270.0472
ILE 8280.0543
PHE 8290.0598
LEU 8300.0590
ILE 8310.0619
PHE 8320.0697
ILE 8330.0726
GLU 8340.0725
ILE 8350.0777
ALA 8360.0844
TYR 8370.0860
LYS 8380.0878
ARG 8390.0952
HIS 8400.0981
LYS 8410.1003

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.