CNRS Nantes University US2B US2B
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***  NMDA  ***

<R2> analysis for 2503131542382221122

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0790
LYS 250.0050
ILE 260.0046
VAL 270.0045
ASN 280.0045
ILE 290.0039
GLY 300.0042
ALA 310.0038
VAL 320.0044
LEU 330.0042
SER 340.0048
THR 350.0053
ARG 360.0054
LYS 370.0049
HIS 380.0039
GLU 390.0040
GLN 400.0038
MET 410.0031
PHE 420.0025
ARG 430.0027
GLU 440.0021
ALA 450.0013
VAL 460.0013
ASN 470.0012
GLN 480.0003
ALA 490.0007
ASN 500.0014
LYS 510.0009
ARG 520.0016
HIS 530.0024
GLN 590.0034
LEU 600.0032
ASN 610.0036
ALA 620.0035
THR 630.0044
SER 640.0046
VAL 650.0055
THR 660.0057
HIS 670.0060
LYS 680.0071
PRO 690.0076
ASN 700.0080
ALA 710.0073
ILE 720.0080
GLN 730.0083
MET 740.0072
ALA 750.0070
LEU 760.0079
SER 770.0075
VAL 780.0065
CYS 790.0072
GLU 800.0078
ASP 810.0069
LEU 820.0060
ILE 830.0067
SER 840.0074
SER 850.0064
GLN 860.0063
VAL 870.0052
TYR 880.0048
ALA 890.0040
ILE 900.0039
LEU 910.0030
VAL 920.0034
SER 930.0032
HIS 940.0037
PRO 950.0048
PRO 960.0054
THR 970.0060
PRO 980.0054
ASN 990.0055
ASP 1000.0047
HIS 1010.0047
PHE 1020.0054
THR 1030.0049
PRO 1040.0043
THR 1050.0051
PRO 1060.0060
VAL 1070.0054
SER 1080.0049
TYR 1090.0060
THR 1100.0065
ALA 1110.0058
GLY 1120.0059
PHE 1130.0071
TYR 1140.0070
ARG 1150.0062
ILE 1160.0054
PRO 1170.0044
VAL 1180.0037
LEU 1190.0026
GLY 1200.0023
LEU 1210.0018
THR 1220.0022
THR 1230.0024
ARG 1240.0017
MET 1250.0023
SER 1260.0021
ILE 1270.0032
TYR 1280.0032
SER 1290.0027
ASP 1300.0038
LYS 1310.0045
SER 1320.0054
ILE 1330.0053
HIS 1340.0048
LEU 1350.0054
SER 1360.0046
PHE 1370.0036
LEU 1380.0027
ARG 1390.0016
THR 1400.0006
VAL 1410.0003
PRO 1420.0002
PRO 1430.0006
TYR 1440.0010
SER 1450.0004
HIS 1460.0007
GLN 1470.0012
SER 1480.0012
SER 1490.0021
VAL 1500.0026
TRP 1510.0026
PHE 1520.0031
GLU 1530.0039
MET 1540.0041
MET 1550.0041
ARG 1560.0049
VAL 1570.0057
TYR 1580.0056
SER 1590.0055
TRP 1600.0045
ASN 1610.0039
HIS 1620.0032
ILE 1630.0025
ILE 1640.0018
LEU 1650.0013
LEU 1660.0020
VAL 1670.0019
SER 1680.0028
ASP 1690.0033
ASP 1700.0034
HIS 1710.0031
GLU 1720.0022
GLY 1730.0019
ARG 1740.0020
ALA 1750.0017
ALA 1760.0006
GLN 1770.0007
LYS 1780.0017
ARG 1790.0016
LEU 1800.0014
GLU 1810.0019
THR 1820.0028
LEU 1830.0029
LEU 1840.0029
GLU 1850.0035
GLU 1860.0044
ARG 1870.0045
GLU 1880.0045
SER 1890.0035
LYS 1900.0024
ALA 1910.0016
GLU 1920.0016
LYS 1930.0007
VAL 1940.0005
LEU 1950.0016
GLN 1960.0024
PHE 1970.0034
ASP 1980.0044
PRO 1990.0047
GLY 2000.0056
THR 2010.0057
LYS 2020.0062
ASN 2030.0058
VAL 2040.0047
THR 2050.0050
ALA 2060.0044
LEU 2070.0035
LEU 2080.0038
MET 2090.0039
GLU 2100.0028
ALA 2110.0028
LYS 2120.0037
GLU 2130.0030
LEU 2140.0027
GLU 2150.0034
ALA 2160.0033
ARG 2170.0039
VAL 2180.0036
ILE 2190.0030
ILE 2200.0023
LEU 2210.0025
SER 2220.0021
ALA 2230.0030
SER 2240.0038
GLU 2250.0047
ASP 2260.0054
ASP 2270.0047
ALA 2280.0044
ALA 2290.0056
THR 2300.0056
VAL 2310.0048
TYR 2320.0054
ARG 2330.0063
ALA 2340.0057
ALA 2350.0053
ALA 2360.0064
MET 2370.0068
LEU 2380.0059
ASN 2390.0062
MET 2400.0053
THR 2410.0060
GLY 2420.0066
SER 2430.0068
GLY 2440.0060
TYR 2450.0052
VAL 2460.0048
TRP 2470.0041
LEU 2480.0034
VAL 2490.0032
GLY 2500.0025
GLU 2510.0029
ARG 2520.0033
GLU 2530.0038
ILE 2540.0045
SER 2550.0049
GLY 2560.0058
ASN 2570.0063
ALA 2580.0056
LEU 2590.0060
ARG 2600.0070
TYR 2610.0067
ALA 2620.0059
PRO 2630.0064
ASP 2640.0068
GLY 2650.0061
ILE 2660.0051
LEU 2670.0046
GLY 2680.0040
LEU 2690.0033
GLN 2700.0033
LEU 2710.0026
ILE 2720.0031
ASN 2730.0029
GLY 2740.0023
LYS 2750.0031
ASN 2760.0030
GLU 2770.0026
SER 2780.0024
ALA 2790.0018
HIS 2800.0011
ILE 2810.0013
SER 2820.0007
ASP 2830.0004
ALA 2840.0008
VAL 2850.0012
GLY 2860.0012
VAL 2870.0019
VAL 2880.0025
ALA 2890.0025
GLN 2900.0030
ALA 2910.0037
VAL 2920.0040
HIS 2930.0042
GLU 2940.0049
LEU 2950.0054
LEU 2960.0056
GLU 2970.0062
LYS 2980.0069
GLU 2990.0079
ASN 3000.0081
ILE 3010.0073
THR 3020.0076
ASP 3030.0070
PRO 3040.0068
PRO 3050.0077
ARG 3060.0077
GLY 3070.0083
CYS 3080.0081
VAL 3090.0093
GLY 3100.0101
ASN 3110.0093
THR 3120.0093
ASN 3130.0090
ILE 3140.0080
TRP 3150.0074
LYS 3160.0078
THR 3170.0069
GLY 3180.0062
PRO 3190.0062
LEU 3200.0062
PHE 3210.0052
LYS 3220.0047
ARG 3230.0051
VAL 3240.0048
LEU 3250.0037
MET 3260.0037
SER 3270.0043
SER 3280.0038
LYS 3290.0036
TYR 3300.0028
ALA 3310.0034
ASP 3320.0030
GLY 3330.0021
VAL 3340.0022
THR 3350.0022
GLY 3360.0028
ARG 3370.0029
VAL 3380.0021
GLU 3390.0028
PHE 3400.0027
ASN 3410.0032
GLU 3420.0039
ASP 3430.0033
GLY 3440.0030
ASP 3450.0018
ARG 3460.0014
LYS 3470.0022
PHE 3480.0027
ALA 3490.0021
ASN 3500.0029
TYR 3510.0030
SER 3520.0040
ILE 3530.0044
MET 3540.0051
ASN 3550.0058
LEU 3560.0064
GLN 3570.0075
ASN 3580.0083
ARG 3590.0076
LYS 3600.0073
LEU 3610.0063
VAL 3620.0066
GLN 3630.0060
VAL 3640.0061
GLY 3650.0055
ILE 3660.0047
TYR 3670.0040
ASN 3680.0038
GLY 3690.0038
THR 3700.0043
HIS 3710.0049
VAL 3720.0049
ILE 3730.0058
PRO 3740.0063
ASN 3750.0071
ASP 3760.0082
ARG 3770.0078
LYS 3780.0080
ILE 3790.0071
ILE 3800.0074
TRP 3810.0066
PRO 3820.0065
GLY 3830.0075
GLY 3840.0081
GLU 3850.0079
THR 3860.0082
GLU 3870.0078
LYS 3880.0068
PRO 3890.0063
ARG 3900.0056
GLY 3910.0047
TYR 3920.0046
GLN 3930.0047
MET 3940.0048
SER 3950.0044
THR 3960.0043
ARG 3970.0037
LEU 3980.0033
LYS 3990.0027
ILE 4000.0024
VAL 4010.0018
THR 4020.0017
ILE 4030.0015
HIS 4040.0014
GLN 4050.0019
GLU 4060.0021
PRO 4070.0026
PHE 4080.0026
VAL 4090.0020
TYR 4100.0016
VAL 4110.0011
LYS 4120.0010
PRO 4130.0012
THR 4140.0018
LEU 4150.0023
SER 4160.0028
ASP 4170.0033
GLY 4180.0031
THR 4190.0028
CYS 4200.0023
LYS 4210.0023
GLU 4220.0027
GLU 4230.0025
PHE 4240.0030
THR 4250.0033
VAL 4260.0035
ASN 4270.0041
GLY 4280.0039
ASP 4290.0041
PRO 4300.0036
VAL 4310.0032
LYS 4320.0033
LYS 4330.0027
VAL 4340.0026
ILE 4350.0024
CYS 4360.0019
THR 4370.0017
GLY 4380.0011
PRO 4390.0010
ASN 4400.0011
ASP 4410.0014
THR 4420.0012
SER 4430.0019
PRO 4440.0020
GLY 4450.0023
SER 4460.0022
PRO 4470.0022
ARG 4480.0016
HIS 4490.0018
THR 4500.0017
VAL 4510.0019
PRO 4520.0019
GLN 4530.0015
CYS 4540.0018
CYS 4550.0018
TYR 4560.0023
GLY 4570.0026
PHE 4580.0032
CYS 4590.0031
ILE 4600.0029
ASP 4610.0036
LEU 4620.0039
LEU 4630.0036
ILE 4640.0039
LYS 4650.0045
LEU 4660.0045
ALA 4670.0044
ARG 4680.0050
THR 4690.0053
MET 4700.0050
ASN 4710.0051
PHE 4720.0043
THR 4730.0041
TYR 4740.0034
GLU 4750.0028
VAL 4760.0023
HIS 4770.0017
LEU 4780.0011
VAL 4790.0008
ALA 4800.0007
ASP 4810.0009
GLY 4820.0010
LYS 4830.0016
PHE 4840.0020
GLY 4850.0019
THR 4860.0024
GLN 4870.0024
GLU 4880.0023
ARG 4890.0024
VAL 4900.0019
ASN 4910.0023
ASN 4920.0027
SER 4930.0024
ASN 4940.0025
LYS 4950.0020
LYS 4960.0021
GLU 4970.0016
TRP 4980.0016
ASN 4990.0013
GLY 5000.0013
MET 5010.0015
MET 5020.0019
GLY 5030.0013
GLU 5040.0012
LEU 5050.0018
LEU 5060.0018
SER 5070.0013
GLY 5080.0019
GLN 5090.0017
ALA 5100.0021
ASP 5110.0027
MET 5120.0028
ILE 5130.0025
VAL 5140.0028
ALA 5150.0025
PRO 5160.0029
LEU 5170.0030
THR 5180.0035
ILE 5190.0039
ASN 5200.0039
ASN 5210.0041
GLU 5220.0035
ARG 5230.0031
ALA 5240.0036
GLN 5250.0035
TYR 5260.0029
ILE 5270.0031
GLU 5280.0037
PHE 5290.0039
SER 5300.0043
LYS 5310.0049
PRO 5320.0046
PHE 5330.0045
LYS 5340.0045
TYR 5350.0048
GLN 5360.0045
GLY 5370.0047
LEU 5380.0045
THR 5390.0047
ILE 5400.0047
LEU 5410.0043
VAL 5420.0046
LYS 5430.0046
LYS 5440.0050
GLU 5450.0054
ILE 5460.0054
PRO 5470.0056
ARG 5480.0052
SER 5490.0078
THR 5500.0074
LEU 5510.0088
ASP 5520.0073
SER 5530.0037
PHE 5540.0028
MET 5550.0087
GLN 5560.0101
PRO 5570.0095
PHE 5580.0149
GLN 5590.0180
SER 5600.0171
THR 5610.0223
LEU 5620.0205
TRP 5630.0160
LEU 5640.0199
LEU 5650.0239
VAL 5660.0207
GLY 5670.0193
LEU 5680.0251
SER 5690.0273
VAL 5700.0239
HIS 5710.0248
VAL 5720.0309
VAL 5730.0312
ALA 5740.0281
VAL 5750.0317
MET 5760.0367
LEU 5770.0351
TYR 5780.0336
LEU 5790.0391
LEU 5800.0419
ASP 5810.0393
ARG 5820.0417
THR 6020.0246
LEU 6030.0245
SER 6040.0183
SER 6050.0194
ALA 6060.0234
MET 6070.0195
TRP 6080.0153
PHE 6090.0203
SER 6100.0211
TRP 6110.0152
GLY 6120.0159
VAL 6130.0209
LEU 6140.0179
LEU 6150.0139
ASN 6160.0192
SER 6170.0181
GLY 6180.0235
ILE 6190.0217
GLY 6200.0267
GLU 6210.0242
GLY 6220.0274
ALA 6230.0323
PRO 6240.0357
ARG 6250.0398
SER 6260.0447
PHE 6270.0470
SER 6280.0464
ALA 6290.0403
ARG 6300.0404
ILE 6310.0433
LEU 6320.0393
GLY 6330.0346
MET 6340.0370
VAL 6350.0376
TRP 6360.0319
ALA 6370.0299
GLY 6380.0329
PHE 6390.0305
ALA 6400.0249
MET 6410.0262
ILE 6420.0274
ILE 6430.0226
VAL 6440.0194
ALA 6450.0224
SER 6460.0208
TYR 6470.0152
THR 6480.0157
ALA 6490.0177
ASN 6500.0136
LEU 6510.0097
ALA 6520.0129
ALA 6530.0119
PHE 6540.0065
LEU 6550.0075
VAL 6560.0102
LEU 6570.0063
ASP 6580.0039
ARG 6590.0038
PRO 6600.0023
GLU 6610.0052
GLU 6620.0064
ARG 6630.0060
ILE 6640.0060
THR 6650.0062
GLY 6660.0058
ILE 6670.0059
ASN 6680.0065
ASP 6690.0066
PRO 6700.0069
ARG 6710.0065
LEU 6720.0060
ARG 6730.0064
ASN 6740.0066
PRO 6750.0062
SER 6760.0063
ASP 6770.0060
LYS 6780.0061
PHE 6790.0057
ILE 6800.0051
TYR 6810.0048
ALA 6820.0042
THR 6830.0037
VAL 6840.0030
LYS 6850.0028
GLN 6860.0024
SER 6870.0028
SER 6880.0033
VAL 6890.0037
ASP 6900.0036
ILE 6910.0037
TYR 6920.0043
PHE 6930.0045
ARG 6940.0043
ARG 6950.0045
GLN 6960.0052
VAL 6970.0056
GLU 6980.0060
LEU 6990.0057
SER 7000.0055
THR 7010.0058
MET 7020.0054
TYR 7030.0048
ARG 7040.0050
HIS 7050.0051
MET 7060.0045
GLU 7070.0041
LYS 7080.0043
HIS 7090.0040
ASN 7100.0034
TYR 7110.0029
GLU 7120.0023
SER 7130.0020
ALA 7140.0024
ALA 7150.0021
GLU 7160.0024
ALA 7170.0030
ILE 7180.0030
GLN 7190.0028
ALA 7200.0034
VAL 7210.0038
ARG 7220.0036
ASP 7230.0037
ASN 7240.0044
LYS 7250.0042
LEU 7260.0044
HIS 7270.0048
ALA 7280.0046
PHE 7290.0041
ILE 7300.0042
TRP 7310.0038
ASP 7320.0038
SER 7330.0042
ALA 7340.0039
VAL 7350.0033
LEU 7360.0037
GLU 7370.0040
PHE 7380.0035
GLU 7390.0032
ALA 7400.0038
SER 7410.0037
GLN 7420.0030
LYS 7430.0032
CYS 7440.0038
ASP 7450.0039
LEU 7460.0041
VAL 7470.0045
THR 7480.0047
THR 7490.0053
GLY 7500.0056
GLU 7510.0059
LEU 7520.0055
PHE 7530.0054
PHE 7540.0051
ARG 7550.0051
SER 7560.0047
GLY 7570.0044
PHE 7580.0038
GLY 7590.0037
ILE 7600.0035
GLY 7610.0031
MET 7620.0031
ARG 7630.0030
LYS 7640.0036
ASP 7650.0037
SER 7660.0039
PRO 7670.0046
TRP 7680.0045
LYS 7690.0046
GLN 7700.0053
ASN 7710.0053
VAL 7720.0047
SER 7730.0050
LEU 7740.0057
SER 7750.0054
ILE 7760.0050
LEU 7770.0057
LYS 7780.0060
SER 7790.0054
HIS 7800.0055
GLU 7810.0062
ASN 7820.0062
GLY 7830.0058
PHE 7840.0053
MET 7850.0049
GLU 7860.0052
ASP 7870.0049
LEU 7880.0042
ASP 7890.0043
LYS 7900.0044
THR 7910.0039
TRP 7920.0034
VAL 7930.0037
ARG 7940.0042
TYR 7950.0039
GLN 7960.0038
GLU 7970.0042
CYS 7980.0043
LEU 8080.0185
THR 8090.0204
PHE 8100.0223
GLU 8110.0165
ASN 8120.0154
MET 8130.0227
ALA 8140.0249
GLY 8150.0209
VAL 8160.0234
PHE 8170.0307
MET 8180.0325
LEU 8190.0296
VAL 8200.0338
ALA 8210.0402
GLY 8220.0400
GLY 8230.0394
ILE 8240.0466
VAL 8250.0507
ALA 8260.0490
GLY 8270.0496
ILE 8280.0581
PHE 8290.0604
LEU 8300.0556
ILE 8310.0598
PHE 8320.0674
ILE 8330.0658
GLU 8340.0620
ILE 8350.0690
ALA 8360.0744
TYR 8370.0706
LYS 8380.0702
ARG 8390.0790
HIS 8400.0780
LYS 8410.0747

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.