CNRS Nantes University US2B US2B
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***  NMDA  ***

<R2> analysis for 2503131542382221122

---  normal mode 10  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0666
LYS 250.0170
ILE 260.0156
VAL 270.0144
ASN 280.0131
ILE 290.0118
GLY 300.0105
ALA 310.0094
VAL 320.0081
LEU 330.0079
SER 340.0072
THR 350.0084
ARG 360.0098
LYS 370.0104
HIS 380.0097
GLU 390.0102
GLN 400.0116
MET 410.0113
PHE 420.0110
ARG 430.0122
GLU 440.0130
ALA 450.0123
VAL 460.0128
ASN 470.0141
GLN 480.0142
ALA 490.0138
ASN 500.0149
LYS 510.0159
ARG 520.0154
HIS 530.0159
GLN 590.0162
LEU 600.0146
ASN 610.0138
ALA 620.0124
THR 630.0114
SER 640.0101
VAL 650.0089
THR 660.0079
HIS 670.0064
LYS 680.0056
PRO 690.0044
ASN 700.0039
ALA 710.0041
ILE 720.0047
GLN 730.0052
MET 740.0057
ALA 750.0063
LEU 760.0069
SER 770.0075
VAL 780.0079
CYS 790.0086
GLU 800.0091
ASP 810.0097
LEU 820.0101
ILE 830.0105
SER 840.0112
SER 850.0120
GLN 860.0123
VAL 870.0117
TYR 880.0119
ALA 890.0106
ILE 900.0093
LEU 910.0088
VAL 920.0074
SER 930.0067
HIS 940.0054
PRO 950.0055
PRO 960.0058
THR 970.0047
PRO 980.0037
ASN 990.0030
ASP 1000.0027
HIS 1010.0035
PHE 1020.0037
THR 1030.0050
PRO 1040.0055
THR 1050.0053
PRO 1060.0057
VAL 1070.0068
SER 1080.0071
TYR 1090.0072
THR 1100.0079
ALA 1110.0089
GLY 1120.0091
PHE 1130.0095
TYR 1140.0107
ARG 1150.0107
ILE 1160.0105
PRO 1170.0099
VAL 1180.0088
LEU 1190.0084
GLY 1200.0070
LEU 1210.0070
THR 1220.0057
THR 1230.0048
ARG 1240.0043
MET 1250.0040
SER 1260.0048
ILE 1270.0052
TYR 1280.0060
SER 1290.0067
ASP 1300.0074
LYS 1310.0085
SER 1320.0089
ILE 1330.0078
HIS 1340.0077
LEU 1350.0092
SER 1360.0092
PHE 1370.0081
LEU 1380.0084
ARG 1390.0074
THR 1400.0076
VAL 1410.0062
PRO 1420.0056
PRO 1430.0047
TYR 1440.0036
SER 1450.0043
HIS 1460.0048
GLN 1470.0037
SER 1480.0041
SER 1490.0047
VAL 1500.0039
TRP 1510.0034
PHE 1520.0042
GLU 1530.0040
MET 1540.0030
MET 1550.0035
ARG 1560.0039
VAL 1570.0033
TYR 1580.0028
SER 1590.0035
TRP 1600.0038
ASN 1610.0048
HIS 1620.0053
ILE 1630.0049
ILE 1640.0053
LEU 1650.0048
LEU 1660.0048
VAL 1670.0046
SER 1680.0046
ASP 1690.0053
ASP 1700.0046
HIS 1710.0049
GLU 1720.0041
GLY 1730.0043
ARG 1740.0055
ALA 1750.0054
ALA 1760.0046
GLN 1770.0054
LYS 1780.0064
ARG 1790.0059
LEU 1800.0054
GLU 1810.0065
THR 1820.0073
LEU 1830.0066
LEU 1840.0064
GLU 1850.0077
GLU 1860.0079
ARG 1870.0072
GLU 1880.0080
SER 1890.0070
LYS 1900.0070
ALA 1910.0062
GLU 1920.0068
LYS 1930.0069
VAL 1940.0064
LEU 1950.0064
GLN 1960.0062
PHE 1970.0057
ASP 1980.0057
PRO 1990.0046
GLY 2000.0050
THR 2010.0062
LYS 2020.0066
ASN 2030.0075
VAL 2040.0070
THR 2050.0079
ALA 2060.0086
LEU 2070.0076
LEU 2080.0073
MET 2090.0085
GLU 2100.0083
ALA 2110.0072
LYS 2120.0077
GLU 2130.0084
LEU 2140.0075
GLU 2150.0067
ALA 2160.0057
ARG 2170.0052
VAL 2180.0043
ILE 2190.0042
ILE 2200.0035
LEU 2210.0034
SER 2220.0032
ALA 2230.0032
SER 2240.0028
GLU 2250.0033
ASP 2260.0040
ASP 2270.0041
ALA 2280.0039
ALA 2290.0048
THR 2300.0055
VAL 2310.0053
TYR 2320.0053
ARG 2330.0065
ALA 2340.0069
ALA 2350.0065
ALA 2360.0070
MET 2370.0082
LEU 2380.0080
ASN 2390.0074
MET 2400.0063
THR 2410.0058
GLY 2420.0064
SER 2430.0057
GLY 2440.0052
TYR 2450.0048
VAL 2460.0037
TRP 2470.0034
LEU 2480.0027
VAL 2490.0027
GLY 2500.0025
GLU 2510.0029
ARG 2520.0028
GLU 2530.0028
ILE 2540.0035
SER 2550.0039
GLY 2560.0046
ASN 2570.0050
ALA 2580.0044
LEU 2590.0049
ARG 2600.0060
TYR 2610.0058
ALA 2620.0050
PRO 2630.0054
ASP 2640.0054
GLY 2650.0043
ILE 2660.0036
LEU 2670.0029
GLY 2680.0029
LEU 2690.0032
GLN 2700.0041
LEU 2710.0049
ILE 2720.0062
ASN 2730.0070
GLY 2740.0059
LYS 2750.0061
ASN 2760.0075
GLU 2770.0078
SER 2780.0093
ALA 2790.0092
HIS 2800.0085
ILE 2810.0094
SER 2820.0106
ASP 2830.0102
ALA 2840.0099
VAL 2850.0111
GLY 2860.0119
VAL 2870.0114
VAL 2880.0117
ALA 2890.0131
GLN 2900.0134
ALA 2910.0131
VAL 2920.0138
HIS 2930.0150
GLU 2940.0150
LEU 2950.0149
LEU 2960.0160
GLU 2970.0170
LYS 2980.0168
GLU 2990.0176
ASN 3000.0174
ILE 3010.0160
THR 3020.0153
ASP 3030.0145
PRO 3040.0130
PRO 3050.0127
ARG 3060.0127
GLY 3070.0116
CYS 3080.0103
VAL 3090.0102
GLY 3100.0112
ASN 3110.0117
THR 3120.0116
ASN 3130.0126
ILE 3140.0124
TRP 3150.0129
LYS 3160.0140
THR 3170.0140
GLY 3180.0124
PRO 3190.0124
LEU 3200.0134
PHE 3210.0127
LYS 3220.0114
ARG 3230.0122
VAL 3240.0127
LEU 3250.0114
MET 3260.0107
SER 3270.0117
SER 3280.0120
LYS 3290.0116
TYR 3300.0115
ALA 3310.0113
ASP 3320.0119
GLY 3330.0107
VAL 3340.0102
THR 3350.0088
GLY 3360.0093
ARG 3370.0098
VAL 3380.0095
GLU 3390.0096
PHE 3400.0091
ASN 3410.0090
GLU 3420.0097
ASP 3430.0085
GLY 3440.0086
ASP 3450.0075
ARG 3460.0076
LYS 3470.0076
PHE 3480.0073
ALA 3490.0065
ASN 3500.0060
TYR 3510.0047
SER 3520.0046
ILE 3530.0037
MET 3540.0040
ASN 3550.0041
LEU 3560.0048
GLN 3570.0058
ASN 3580.0070
ARG 3590.0065
LYS 3600.0063
LEU 3610.0054
VAL 3620.0055
GLN 3630.0052
VAL 3640.0045
GLY 3650.0045
ILE 3660.0050
TYR 3670.0050
ASN 3680.0062
GLY 3690.0064
THR 3700.0062
HIS 3710.0055
VAL 3720.0045
ILE 3730.0048
PRO 3740.0043
ASN 3750.0052
ASP 3760.0055
ARG 3770.0054
LYS 3780.0049
ILE 3790.0040
ILE 3800.0046
TRP 3810.0042
PRO 3820.0050
GLY 3830.0060
GLY 3840.0058
GLU 3850.0051
THR 3860.0044
GLU 3870.0036
LYS 3880.0030
PRO 3890.0038
ARG 3900.0040
GLY 3910.0052
TYR 3920.0054
GLN 3930.0059
MET 3940.0061
SER 3950.0068
THR 3960.0060
ARG 3970.0067
LEU 3980.0064
LYS 3990.0072
ILE 4000.0067
VAL 4010.0073
THR 4020.0069
ILE 4030.0074
HIS 4040.0071
GLN 4050.0067
GLU 4060.0063
PRO 4070.0055
PHE 4080.0052
VAL 4090.0055
TYR 4100.0056
VAL 4110.0064
LYS 4120.0065
PRO 4130.0072
THR 4140.0069
LEU 4150.0071
SER 4160.0081
ASP 4170.0078
GLY 4180.0078
THR 4190.0067
CYS 4200.0060
LYS 4210.0052
GLU 4220.0043
GLU 4230.0036
PHE 4240.0028
THR 4250.0024
VAL 4260.0023
ASN 4270.0022
GLY 4280.0023
ASP 4290.0024
PRO 4300.0029
VAL 4310.0032
LYS 4320.0037
LYS 4330.0046
VAL 4340.0055
ILE 4350.0065
CYS 4360.0069
THR 4370.0080
GLY 4380.0085
PRO 4390.0093
ASN 4400.0092
ASP 4410.0100
THR 4420.0098
SER 4430.0108
PRO 4440.0114
GLY 4450.0123
SER 4460.0119
PRO 4470.0120
ARG 4480.0109
HIS 4490.0105
THR 4500.0097
VAL 4510.0091
PRO 4520.0081
GLN 4530.0073
CYS 4540.0062
CYS 4550.0058
TYR 4560.0048
GLY 4570.0043
PHE 4580.0041
CYS 4590.0046
ILE 4600.0044
ASP 4610.0035
LEU 4620.0035
LEU 4630.0042
ILE 4640.0037
LYS 4650.0030
LEU 4660.0035
ALA 4670.0040
ARG 4680.0035
THR 4690.0031
MET 4700.0037
ASN 4710.0044
PHE 4720.0049
THR 4730.0058
TYR 4740.0059
GLU 4750.0069
VAL 4760.0067
HIS 4770.0076
LEU 4780.0079
VAL 4790.0088
ALA 4800.0098
ASP 4810.0101
GLY 4820.0093
LYS 4830.0093
PHE 4840.0088
GLY 4850.0096
THR 4860.0103
GLN 4870.0110
GLU 4880.0120
ARG 4890.0130
VAL 4900.0133
ASN 4910.0142
ASN 4920.0152
SER 4930.0147
ASN 4940.0142
LYS 4950.0132
LYS 4960.0121
GLU 4970.0115
TRP 4980.0105
ASN 4990.0104
GLY 5000.0095
MET 5010.0084
MET 5020.0087
GLY 5030.0096
GLU 5040.0091
LEU 5050.0082
LEU 5060.0089
SER 5070.0096
GLY 5080.0089
GLN 5090.0089
ALA 5100.0078
ASP 5110.0070
MET 5120.0063
ILE 5130.0065
VAL 5140.0057
ALA 5150.0061
PRO 5160.0064
LEU 5170.0070
THR 5180.0075
ILE 5190.0075
ASN 5200.0085
ASN 5210.0090
GLU 5220.0096
ARG 5230.0087
ALA 5240.0080
GLN 5250.0087
TYR 5260.0086
ILE 5270.0076
GLU 5280.0065
PHE 5290.0061
SER 5300.0051
LYS 5310.0049
PRO 5320.0052
PHE 5330.0045
LYS 5340.0052
TYR 5350.0061
GLN 5360.0069
GLY 5370.0080
LEU 5380.0087
THR 5390.0090
ILE 5400.0095
LEU 5410.0090
VAL 5420.0095
LYS 5430.0093
LYS 5440.0090
GLU 5450.0095
ILE 5460.0090
PRO 5470.0093
ARG 5480.0075
SER 5490.0060
THR 5500.0052
LEU 5510.0055
ASP 5520.0053
SER 5530.0052
PHE 5540.0067
MET 5550.0070
GLN 5560.0045
PRO 5570.0058
PHE 5580.0070
GLN 5590.0060
SER 5600.0065
THR 5610.0077
LEU 5620.0103
TRP 5630.0111
LEU 5640.0116
LEU 5650.0133
VAL 5660.0157
GLY 5670.0181
LEU 5680.0182
SER 5690.0201
VAL 5700.0230
HIS 5710.0244
VAL 5720.0249
VAL 5730.0277
ALA 5740.0301
VAL 5750.0308
MET 5760.0323
LEU 5770.0352
TYR 5780.0370
LEU 5790.0377
LEU 5800.0399
ASP 5810.0426
ARG 5820.0444
THR 6020.0423
LEU 6030.0379
SER 6040.0367
SER 6050.0384
ALA 6060.0361
MET 6070.0320
TRP 6080.0326
PHE 6090.0335
SER 6100.0297
TRP 6110.0269
GLY 6120.0287
VAL 6130.0281
LEU 6140.0236
LEU 6150.0231
ASN 6160.0256
SER 6170.0291
GLY 6180.0325
ILE 6190.0358
GLY 6200.0387
GLU 6210.0403
GLY 6220.0394
ALA 6230.0434
PRO 6240.0426
ARG 6250.0463
SER 6260.0464
PHE 6270.0459
SER 6280.0427
ALA 6290.0400
ARG 6300.0406
ILE 6310.0394
LEU 6320.0354
GLY 6330.0344
MET 6340.0345
VAL 6350.0323
TRP 6360.0287
ALA 6370.0284
GLY 6380.0278
PHE 6390.0247
ALA 6400.0223
MET 6410.0224
ILE 6420.0211
ILE 6430.0180
VAL 6440.0169
ALA 6450.0174
SER 6460.0153
TYR 6470.0127
THR 6480.0131
ALA 6490.0137
ASN 6500.0109
LEU 6510.0095
ALA 6520.0111
ALA 6530.0110
PHE 6540.0082
LEU 6550.0085
VAL 6560.0106
LEU 6570.0099
ASP 6580.0086
ARG 6590.0096
PRO 6600.0101
GLU 6610.0114
GLU 6620.0118
ARG 6630.0111
ILE 6640.0115
THR 6650.0113
GLY 6660.0109
ILE 6670.0117
ASN 6680.0124
ASP 6690.0127
PRO 6700.0138
ARG 6710.0134
LEU 6720.0129
ARG 6730.0136
ASN 6740.0145
PRO 6750.0140
SER 6760.0144
ASP 6770.0143
LYS 6780.0138
PHE 6790.0129
ILE 6800.0124
TYR 6810.0116
ALA 6820.0113
THR 6830.0104
VAL 6840.0100
LYS 6850.0107
GLN 6860.0103
SER 6870.0095
SER 6880.0093
VAL 6890.0098
ASP 6900.0108
ILE 6910.0107
TYR 6920.0106
PHE 6930.0115
ARG 6940.0121
ARG 6950.0118
GLN 6960.0122
VAL 6970.0133
GLU 6980.0135
LEU 6990.0133
SER 7000.0139
THR 7010.0143
MET 7020.0132
TYR 7030.0129
ARG 7040.0138
HIS 7050.0135
MET 7060.0124
GLU 7070.0128
LYS 7080.0132
HIS 7090.0122
ASN 7100.0114
TYR 7110.0107
GLU 7120.0103
SER 7130.0092
ALA 7140.0085
ALA 7150.0080
GLU 7160.0091
ALA 7170.0094
ILE 7180.0084
GLN 7190.0086
ALA 7200.0097
VAL 7210.0095
ARG 7220.0087
ASP 7230.0094
ASN 7240.0103
LYS 7250.0109
LEU 7260.0109
HIS 7270.0110
ALA 7280.0105
PHE 7290.0099
ILE 7300.0097
TRP 7310.0087
ASP 7320.0078
SER 7330.0074
ALA 7340.0064
VAL 7350.0067
LEU 7360.0074
GLU 7370.0068
PHE 7380.0060
GLU 7390.0066
ALA 7400.0069
SER 7410.0060
GLN 7420.0056
LYS 7430.0064
CYS 7440.0067
ASP 7450.0075
LEU 7460.0080
VAL 7470.0082
THR 7480.0085
THR 7490.0094
GLY 7500.0100
GLU 7510.0097
LEU 7520.0090
PHE 7530.0095
PHE 7540.0092
ARG 7550.0082
SER 7560.0075
GLY 7570.0066
PHE 7580.0062
GLY 7590.0058
ILE 7600.0055
GLY 7610.0064
MET 7620.0065
ARG 7630.0070
LYS 7640.0066
ASP 7650.0065
SER 7660.0059
PRO 7670.0050
TRP 7680.0047
LYS 7690.0047
GLN 7700.0039
ASN 7710.0034
VAL 7720.0038
SER 7730.0039
LEU 7740.0031
SER 7750.0028
ILE 7760.0034
LEU 7770.0033
LYS 7780.0027
SER 7790.0027
HIS 7800.0034
GLU 7810.0034
ASN 7820.0029
GLY 7830.0031
PHE 7840.0026
MET 7850.0033
GLU 7860.0036
ASP 7870.0029
LEU 7880.0031
ASP 7890.0039
LYS 7900.0036
THR 7910.0030
TRP 7920.0038
VAL 7930.0046
ARG 7940.0045
TYR 7950.0040
GLN 7960.0046
GLU 7970.0055
CYS 7980.0061
LEU 8080.0073
THR 8090.0072
PHE 8100.0064
GLU 8110.0054
ASN 8120.0041
MET 8130.0047
ALA 8140.0058
GLY 8150.0038
VAL 8160.0041
PHE 8170.0076
MET 8180.0095
LEU 8190.0087
VAL 8200.0107
ALA 8210.0143
GLY 8220.0154
GLY 8230.0169
ILE 8240.0200
VAL 8250.0236
ALA 8260.0242
GLY 8270.0268
ILE 8280.0322
PHE 8290.0355
LEU 8300.0354
ILE 8310.0380
PHE 8320.0434
ILE 8330.0452
GLU 8340.0458
ILE 8350.0497
ALA 8360.0542
TYR 8370.0554
LYS 8380.0573
ARG 8390.0626
HIS 8400.0644
LYS 8410.0666

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.