Should you encounter any unexpected behaviour,
please let us know.

* TRANSFERASE/RNA 05-DEC-14 4RWP *

CA distance fluctuations for 2503071142443400561

--- normal mode 10 ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok

largest increase ref largest decrease
LYS 13 0.20 MET 1 -0.25 GLY 71

LYS 13 0.14 GLU 2 -0.25 GLY 71

PHE 14 0.17 LEU 3 -0.19 GLY 71

LYS 13 0.11 ARG 4 -0.16 GLY 71

LYS 13 0.11 HIS 5 -0.19 GLY 71

LYS 13 0.13 THR 6 -0.18 GLY 71

CYS 269 0.07 PRO 7 -0.16 GLY 71

CYS 269 0.08 ALA 8 -0.13 GLY 71

SER 250 0.13 ARG 9 -0.12 CYS 24

THR 6 0.07 ASP 10 -0.16 PHE 25

LEU 3 0.09 LEU 11 -0.14 ASN 22

THR 217 0.10 ASP 12 -0.14 ASN 22

MET 1 0.20 LYS 13 -0.19 ASN 22

LEU 3 0.17 PHE 14 -0.18 ASN 22

THR 217 0.15 ILE 15 -0.16 ASN 22

THR 217 0.13 GLU 16 -0.23 ASN 22

LYS 220 0.15 ASP 17 -0.26 ASN 22

LYS 220 0.18 HIS 18 -0.21 PHE 25

LYS 220 0.14 LEU 19 -0.13 PHE 25

LYS 220 0.11 LEU 20 -0.20 PRO 21

ARG 70 0.13 PRO 21 -0.20 LEU 20

ASN 224 0.13 ASN 22 -0.26 ASP 17

ASN 224 0.11 THR 23 -0.20 ASP 17

ASN 224 0.12 CYS 24 -0.24 ASP 17

ASN 224 0.14 PHE 25 -0.25 ASP 17

ASN 224 0.12 ARG 26 -0.20 ASP 17

ASN 224 0.12 THR 27 -0.19 ASP 17

ASN 224 0.14 GLN 28 -0.19 ASP 17

ASN 224 0.14 VAL 29 -0.17 ASP 17

ASN 224 0.11 LYS 30 -0.18 ASP 17

ASN 224 0.12 GLU 31 -0.17 ASP 17

ASN 224 0.15 ALA 32 -0.15 MET 1

ASN 224 0.12 ILE 33 -0.15 ASP 17

ASN 224 0.10 ASP 34 -0.15 ASP 17

ASN 224 0.12 ILE 35 -0.14 ASP 17

GLY 310 0.13 VAL 36 -0.14 MET 1

GLY 310 0.12 CYS 37 -0.13 ASP 17

GLY 310 0.11 ARG 38 -0.13 ASP 17

ASP 312 0.12 PHE 39 -0.12 MET 1

GLY 310 0.13 LEU 40 -0.12 MET 1

GLY 310 0.11 LYS 41 -0.11 ASP 17

GLY 311 0.10 GLU 42 -0.11 ASP 17

ASP 312 0.12 ARG 43 -0.11 MET 1

GLY 311 0.13 CYS 44 -0.11 MET 1

GLY 311 0.12 PHE 45 -0.10 MET 1

GLY 311 0.11 GLN 46 -0.10 MET 1

GLY 311 0.11 GLY 47 -0.10 MET 1

GLY 311 0.10 THR 48 -0.09 MET 1

GLY 311 0.11 ALA 49 -0.09 MET 1

GLY 311 0.11 ASP 50 -0.09 MET 1

GLY 311 0.10 PRO 51 -0.08 MET 1

GLY 311 0.11 VAL 52 -0.09 GLU 2

GLY 311 0.10 ARG 53 -0.09 GLU 2

GLY 311 0.10 VAL 54 -0.10 ASP 17

GLY 310 0.09 SER 55 -0.09 LEU 20

GLY 310 0.09 LYS 56 -0.11 LEU 20

GLY 310 0.11 VAL 57 -0.12 LEU 20

GLY 310 0.10 VAL 58 -0.12 LEU 20

GLY 310 0.10 LYS 59 -0.13 LEU 20

GLY 310 0.12 GLY 60 -0.11 GLU 2

PRO 228 0.12 GLY 61 -0.14 THR 187

SER 122 0.09 SER 62 -0.12 GLU 2

THR 27 0.08 SER 63 -0.14 LEU 20

ARG 198 0.09 GLY 64 -0.12 THR 190

SER 122 0.09 LYS 65 -0.17 ARG 194

THR 27 0.08 GLY 66 -0.11 ARG 194

SER 122 0.09 THR 67 -0.09 THR 190

ASN 224 0.10 THR 68 -0.13 SER 63

ASN 224 0.12 LEU 69 -0.15 GLU 2

ASN 224 0.14 ARG 70 -0.16 GLU 2

ASN 224 0.17 GLY 71 -0.25 GLU 2

ASN 224 0.18 ARG 72 -0.21 GLU 2

ASN 224 0.20 SER 73 -0.20 GLU 2

ASN 224 0.20 ASP 74 -0.17 GLU 2

PRO 228 0.16 ALA 75 -0.15 GLU 2

GLY 310 0.17 ASP 76 -0.13 GLU 2

GLY 310 0.16 LEU 77 -0.12 GLU 2

GLY 310 0.15 VAL 78 -0.11 GLU 2

GLY 310 0.13 VAL 79 -0.11 GLU 2

GLY 310 0.11 PHE 80 -0.10 LEU 20

GLY 311 0.11 LEU 81 -0.09 GLU 2

GLY 311 0.10 THR 82 -0.08 LEU 20

GLY 311 0.10 LYS 83 -0.08 GLU 2

GLY 311 0.11 LEU 84 -0.08 GLU 2

LEU 346 0.09 THR 85 -0.07 GLU 2

LEU 346 0.10 SER 86 -0.07 LYS 220

GLY 311 0.11 PHE 87 -0.09 LYS 220

GLY 311 0.11 GLU 88 -0.09 LYS 220

GLY 311 0.12 ASP 89 -0.08 GLU 2

GLY 311 0.14 GLN 90 -0.09 GLU 2

GLY 311 0.17 LEU 91 -0.10 LYS 220

GLY 311 0.15 ARG 92 -0.09 LYS 220

GLY 311 0.16 ARG 93 -0.09 GLU 2

GLY 311 0.18 ARG 94 -0.09 GLU 2

GLY 311 0.21 GLY 95 -0.09 GLU 2

GLY 311 0.18 GLU 96 -0.09 MET 1

GLY 311 0.17 PHE 97 -0.09 GLU 2

GLY 311 0.20 ILE 98 -0.10 MET 1

GLY 311 0.20 GLN 99 -0.09 MET 1

GLY 311 0.17 GLU 100 -0.10 MET 1

GLY 311 0.17 ILE 101 -0.11 MET 1

ASP 312 0.19 ARG 102 -0.10 MET 1

ASP 312 0.18 ARG 103 -0.10 MET 1

ASP 312 0.16 GLN 104 -0.11 MET 1

ASP 312 0.17 LEU 105 -0.12 MET 1

ASP 312 0.17 GLU 106 -0.11 MET 1

ASP 312 0.15 ALA 107 -0.11 MET 1

ASP 312 0.14 CYS 108 -0.12 MET 1

ASP 312 0.15 GLN 109 -0.13 MET 1

ASP 312 0.15 ARG 110 -0.12 MET 1

ASP 312 0.14 GLU 111 -0.12 MET 1

ASN 224 0.14 GLN 112 -0.13 MET 1

ASN 224 0.14 LYS 113 -0.14 MET 1

ASN 224 0.16 PHE 114 -0.15 MET 1

ASN 224 0.18 LYS 115 -0.15 MET 1

ASN 224 0.20 VAL 116 -0.14 MET 1

ASN 224 0.24 THR 117 -0.13 MET 1

ASN 224 0.25 PHE 118 -0.12 MET 1

ASN 224 0.33 GLU 119 -0.10 MET 1

ASN 224 0.35 VAL 120 -0.07 MET 1

LYS 225 0.37 GLN 121 -0.07 GLN 99

ASN 224 0.46 SER 122 -0.05 MET 1

ASP 312 0.43 PRO 123 -0.05 MET 1

ASP 312 0.42 ARG 124 -0.08 ARG 125

ASP 312 0.32 ARG 125 -0.08 ARG 124

GLY 311 0.31 GLU 126 -0.08 ARG 92

GLY 311 0.27 ASN 127 -0.09 LYS 220

GLY 311 0.28 PRO 128 -0.09 GLU 2

GLY 310 0.26 ARG 129 -0.10 GLU 2

GLY 310 0.25 ALA 130 -0.11 GLU 2

GLY 310 0.23 LEU 131 -0.11 GLU 2

GLY 310 0.24 SER 132 -0.12 MET 1

ASN 224 0.23 PHE 133 -0.13 MET 1

ASN 224 0.24 VAL 134 -0.15 MET 1

ASN 224 0.20 LEU 135 -0.16 MET 1

ASN 224 0.19 SER 136 -0.17 MET 1

ASN 224 0.16 SER 137 -0.17 MET 1

ASN 224 0.15 PRO 138 -0.17 MET 1

ASN 224 0.14 GLN 139 -0.17 MET 1

ASN 224 0.15 LEU 140 -0.18 MET 1

ASN 224 0.15 GLN 141 -0.21 MET 1

ASN 224 0.17 GLN 142 -0.22 MET 1

ASN 224 0.20 GLU 143 -0.20 MET 1

ASN 224 0.20 VAL 144 -0.18 MET 1

ASN 224 0.24 GLU 145 -0.16 MET 1

ASN 224 0.20 PHE 146 -0.14 GLU 2

GLY 310 0.22 ASP 147 -0.13 GLU 2

GLY 310 0.20 VAL 148 -0.12 GLU 2

GLY 310 0.20 LEU 149 -0.11 GLU 2

GLY 311 0.17 PRO 150 -0.10 GLU 2

GLY 311 0.14 ALA 151 -0.10 GLU 2

GLY 311 0.11 PHE 152 -0.09 GLU 2

LEU 346 0.09 ASP 153 -0.09 LEU 20

LEU 346 0.11 ALA 154 -0.08 LEU 20

LEU 346 0.11 LEU 155 -0.08 LEU 20

LEU 346 0.10 GLY 156 -0.08 LEU 20

LEU 346 0.09 GLN 157 -0.08 LEU 20

LEU 346 0.10 TRP 158 -0.08 LEU 20

LEU 346 0.09 THR 159 -0.07 LEU 20

ARG 245 0.09 PRO 160 -0.07 LEU 20

ARG 245 0.11 GLY 161 -0.08 ASN 199

LEU 346 0.13 TYR 162 -0.07 ASN 199

LEU 346 0.16 LYS 163 -0.08 ASN 199

LEU 346 0.14 PRO 164 -0.07 ASN 199

LEU 346 0.15 ASN 165 -0.06 ASN 199

LEU 346 0.17 PRO 166 -0.07 ASN 224

LEU 346 0.15 GLU 167 -0.07 ASN 224

LEU 346 0.13 ILE 168 -0.07 ASN 224

LEU 346 0.15 TYR 169 -0.09 ASN 224

LEU 346 0.15 VAL 170 -0.09 ASN 224

LEU 346 0.13 GLN 171 -0.09 ASN 224

LEU 346 0.13 LEU 172 -0.11 ASN 224

LEU 346 0.13 ILE 173 -0.12 ASN 224

LEU 346 0.13 LYS 174 -0.12 ASN 224

LEU 346 0.11 GLU 175 -0.12 ASN 224

LYS 293 0.13 CYS 176 -0.15 ASN 224

LYS 293 0.13 LYS 177 -0.16 ASN 224

LYS 293 0.11 SER 178 -0.15 ASN 224

LYS 293 0.14 ARG 179 -0.17 ASN 224

LYS 293 0.19 GLY 180 -0.20 ASN 224

LYS 293 0.17 LYS 181 -0.19 ASN 224

LYS 293 0.18 GLU 182 -0.19 ASN 224

GLY 306 0.26 GLY 183 -0.18 ASN 224

GLY 311 0.20 GLU 184 -0.15 ASN 224

ASN 307 0.15 PHE 185 -0.10 LYS 220

PRO 123 0.16 SER 186 -0.11 LYS 65

ASN 307 0.16 THR 187 -0.14 GLY 61

ASN 307 0.11 CYS 188 -0.10 LYS 65

LEU 346 0.11 PHE 189 -0.10 LYS 65

PRO 123 0.11 THR 190 -0.13 LYS 65

PRO 123 0.09 GLU 191 -0.12 LYS 65

LEU 346 0.11 LEU 192 -0.09 LYS 65

PRO 123 0.12 GLN 193 -0.10 LYS 65

PRO 123 0.10 ARG 194 -0.17 LYS 65

PRO 123 0.09 ASP 195 -0.09 ALA 302

PRO 123 0.12 PHE 196 -0.12 ASN 199

SER 122 0.10 LEU 197 -0.11 PHE 196

SER 122 0.09 ARG 198 -0.11 PHE 196

THR 27 0.09 ASN 199 -0.14 ALA 274

SER 122 0.10 ARG 200 -0.09 TRP 272

THR 247 0.09 PRO 201 -0.10 LEU 268

SER 122 0.07 THR 202 -0.07 ARG 194

SER 122 0.07 LYS 203 -0.06 ASN 22

SER 122 0.09 LEU 204 -0.06 LEU 268

SER 122 0.09 LYS 205 -0.06 ARG 194

SER 122 0.08 SER 206 -0.06 ASP 34

SER 122 0.09 LEU 207 -0.05 ASN 22

SER 122 0.11 ILE 208 -0.05 LYS 181

SER 122 0.10 ARG 209 -0.07 SER 63

SER 122 0.09 LEU 210 -0.07 GLY 71

SER 122 0.12 VAL 211 -0.05 LYS 181

SER 122 0.13 LYS 212 -0.07 GLY 183

ILE 15 0.13 HIS 213 -0.09 GLU 184

PHE 14 0.13 TRP 214 -0.07 ARG 4

SER 122 0.15 TYR 215 -0.08 GLY 183

HIS 18 0.15 GLN 216 -0.11 GLY 183

HIS 18 0.18 THR 217 -0.11 GLU 184

SER 122 0.13 CYS 218 -0.09 LYS 181

SER 122 0.17 LYS 219 -0.13 LYS 181

HIS 18 0.18 LYS 220 -0.14 LYS 181

HIS 18 0.14 THR 221 -0.11 GLY 180

SER 122 0.24 HIS 222 -0.12 GLY 180

SER 122 0.27 GLY 223 -0.17 GLY 180

SER 122 0.46 ASN 224 -0.20 GLY 180

SER 122 0.46 LYS 225 -0.13 GLY 180

SER 122 0.37 LEU 226 -0.10 GLU 182

SER 122 0.36 PRO 227 -0.07 GLY 306

SER 122 0.34 PRO 228 -0.12 GLY 306

SER 122 0.25 GLN 229 -0.10 GLY 183

SER 122 0.23 TYR 230 -0.09 GLY 183

SER 122 0.25 ALA 231 -0.05 PRO 201

SER 122 0.21 LEU 232 -0.05 PRO 201

SER 122 0.17 GLU 233 -0.05 PRO 201

PRO 123 0.18 LEU 234 -0.08 PRO 201

SER 122 0.19 LEU 235 -0.07 PRO 201

SER 122 0.15 THR 236 -0.08 PRO 201

SER 122 0.14 VAL 237 -0.10 PRO 201

PRO 123 0.16 TYR 238 -0.12 LEU 268

GLU 273 0.14 ALA 239 -0.14 LEU 261

SER 122 0.12 TRP 240 -0.10 HIS 265

ALA 274 0.17 GLU 241 -0.12 LYS 267

GLU 273 0.21 GLN 242 -0.15 LYS 267

GLU 273 0.17 GLY 243 -0.14 LEU 261

GLU 273 0.13 SER 244 -0.12 THR 247

ALA 274 0.13 ARG 245 -0.11 LYS 267

SER 122 0.09 LYS 246 -0.14 THR 247

PRO 201 0.09 THR 247 -0.14 LYS 246

ARG 9 0.07 ASP 248 -0.08 PHE 249

ARG 9 0.10 PHE 249 -0.08 ASP 248

ARG 9 0.13 SER 250 -0.08 ASN 22

ARG 9 0.10 THR 251 -0.09 ASN 22

ARG 9 0.10 ALA 252 -0.09 ASN 22

GLU 273 0.11 GLN 253 -0.07 ASN 22

SER 122 0.11 GLY 254 -0.07 THR 247

SER 122 0.11 PHE 255 -0.05 GLY 71

CYS 269 0.12 GLN 256 -0.07 ARG 324

PHE 271 0.13 THR 257 -0.08 THR 247

SER 122 0.15 VAL 258 -0.07 THR 247

SER 122 0.15 LEU 259 -0.07 GLY 243

SER 122 0.15 GLU 260 -0.09 GLY 243

SER 122 0.18 LEU 261 -0.14 ALA 239

SER 122 0.20 VAL 262 -0.10 ALA 239

SER 122 0.19 LEU 263 -0.11 GLY 243

ARG 124 0.20 LYS 264 -0.13 GLY 243

PRO 123 0.24 HIS 265 -0.13 ALA 239

ARG 124 0.25 GLN 266 -0.13 GLN 242

ARG 124 0.22 LYS 267 -0.15 GLN 242

PRO 123 0.22 LEU 268 -0.12 GLN 242

PRO 123 0.22 CYS 269 -0.08 ASN 199

PRO 123 0.20 ILE 270 -0.10 ASN 199

LEU 346 0.19 PHE 271 -0.10 ASN 199

LEU 346 0.21 TRP 272 -0.13 ASN 199

LEU 346 0.25 GLU 273 -0.11 ASN 199

LEU 346 0.20 ALA 274 -0.14 ASN 199

LEU 346 0.17 TYR 275 -0.10 ASN 199

LEU 346 0.20 TYR 276 -0.09 ASN 199

LEU 346 0.24 ASP 277 -0.09 ASN 199

LEU 346 0.25 PHE 278 -0.07 ASN 199

LEU 346 0.23 THR 279 -0.07 ASN 199

LEU 346 0.20 ASN 280 -0.07 ASN 224

LEU 346 0.20 PRO 281 -0.08 ASN 224

LEU 346 0.17 VAL 282 -0.09 ASN 224

LEU 346 0.18 VAL 283 -0.09 ASN 224

LEU 346 0.22 GLY 284 -0.08 ASN 224

LEU 346 0.19 ARG 285 -0.09 ASN 224

LEU 346 0.17 CYS 286 -0.11 ASN 224

LEU 346 0.19 MET 287 -0.09 ASN 224

LEU 346 0.20 LEU 288 -0.08 ASN 224

ARG 124 0.17 GLN 289 -0.10 ASN 224

ARG 124 0.20 GLN 290 -0.10 ASN 224

ARG 124 0.20 LEU 291 -0.09 GLY 311

ARG 124 0.21 LYS 292 -0.10 GLY 311

ARG 124 0.26 LYS 293 -0.12 GLY 311

ARG 124 0.29 PRO 294 -0.07 GLY 311

ARG 124 0.28 ARG 295 -0.08 GLN 242

PRO 123 0.28 PRO 296 -0.08 GLN 242

PRO 123 0.26 VAL 297 -0.07 ASN 199

PRO 123 0.24 ILE 298 -0.08 ASN 199

PRO 123 0.21 LEU 299 -0.08 ASN 199

PRO 123 0.20 ASP 300 -0.09 LEU 197

PRO 123 0.16 PRO 301 -0.10 ASN 199

PRO 123 0.14 ALA 302 -0.09 LEU 197

PRO 123 0.15 ASP 303 -0.10 ASN 224

LEU 346 0.16 PRO 304 -0.11 ASN 224

GLY 183 0.16 THR 305 -0.14 ASN 224

GLY 183 0.26 GLY 306 -0.15 ASN 224

PRO 123 0.28 ASN 307 -0.11 ASN 224

PRO 123 0.30 VAL 308 -0.10 ASN 224

PRO 123 0.32 GLY 309 -0.08 ASN 224

PRO 123 0.41 GLY 310 -0.11 ASN 224

PRO 123 0.41 GLY 311 -0.12 LYS 293

PRO 123 0.43 ASP 312 -0.08 LYS 293

ARG 124 0.36 THR 313 -0.08 GLY 243

SER 122 0.37 HIS 314 -0.07 MET 345

SER 122 0.37 SER 315 -0.06 GLY 243

SER 122 0.31 TRP 316 -0.08 GLY 243

SER 122 0.29 GLN 317 -0.09 GLY 243

SER 122 0.27 ARG 318 -0.07 GLY 243

SER 122 0.24 LEU 319 -0.07 GLY 243

SER 122 0.22 ALA 320 -0.09 GLY 243

SER 122 0.19 GLN 321 -0.08 GLY 243

SER 122 0.16 GLU 322 -0.06 GLY 243

SER 122 0.15 ALA 323 -0.06 GLY 243

SER 122 0.14 ARG 324 -0.07 ALA 342

SER 122 0.10 VAL 325 -0.06 THR 221

SER 122 0.09 TRP 326 -0.06 GLY 71

CYS 269 0.11 LEU 327 -0.07 GLY 71

LYS 267 0.10 GLY 328 -0.08 GLY 71

LYS 267 0.08 TYR 329 -0.11 GLY 71

CYS 269 0.08 PRO 330 -0.14 GLY 71

CYS 269 0.08 CYS 331 -0.13 GLY 71

CYS 269 0.10 CYS 332 -0.10 GLY 71

CYS 269 0.10 LYS 333 -0.11 GLY 71

PHE 278 0.10 ASN 334 -0.11 GLY 71

PHE 278 0.09 LEU 335 -0.14 GLN 141

PHE 278 0.10 ASP 336 -0.13 GLN 141

PHE 278 0.09 GLY 337 -0.12 GLY 71

CYS 269 0.12 SER 338 -0.09 GLY 71

CYS 269 0.12 LEU 339 -0.08 GLY 71

GLY 341 0.12 VAL 340 -0.09 ASN 22

PHE 278 0.13 GLY 341 -0.06 ASN 22

PHE 271 0.15 ALA 342 -0.07 ARG 324

GLU 273 0.15 TRP 343 -0.08 THR 247

PHE 278 0.18 THR 344 -0.10 LYS 264

GLU 273 0.20 MET 345 -0.13 LYS 264

PHE 278 0.25 LEU 346 -0.13 LYS 267

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.

Should you encounter any unexpected behaviour, please let us know.

*** TRANSFERASE/RNA 05-DEC-14 4RWP ***

CA distance fluctuations for 2503071142443400561

--- normal mode 10 ---

Should you encounter any unexpected behaviour,
please let us know.

* TRANSFERASE/RNA 05-DEC-14 4RWP *