This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLY 1
PRO 2
-0.0002
PRO 2
ASN 3
0.0003
ASN 3
SER 4
-0.0004
SER 4
ILE 5
0.0003
ILE 5
GLU 6
-0.0005
GLU 6
GLY 7
0.0001
GLY 7
THR 8
0.0000
THR 8
PRO 9
0.0002
PRO 9
SER 10
-0.0003
SER 10
LYS 11
0.0000
LYS 11
CYS 12
0.0000
CYS 12
TYR 13
-0.0002
TYR 13
CYS 14
-0.0001
CYS 14
ARG 15
-0.0000
ARG 15
LEU 16
-0.0001
LEU 16
LYS 17
-0.0000
LYS 17
ALA 18
-0.0002
ALA 18
MET 19
-0.0002
MET 19
ILE 20
0.0001
ILE 20
MET 21
0.0001
MET 21
CYM 22
-0.0000
CYM 22
LYS 23
-0.0001
LYS 23
GLY 24
0.0001
GLY 24
CYS 25
0.0002
CYS 25
GLY 26
-0.0003
GLY 26
ALA 27
-0.0001
ALA 27
PHE 28
-0.0000
PHE 28
CYS 29
0.0001
CYS 29
HSD 30
0.0002
HSD 30
ASP 31
0.0001
ASP 31
ASP 32
-0.0002
ASP 32
CYS 33
0.0000
CYS 33
ILE 34
-0.0000
ILE 34
GLY 35
0.0001
GLY 35
PRO 36
-0.0005
PRO 36
SER 37
0.0001
SER 37
LYS 38
0.0001
LYS 38
LEU 39
-0.0003
LEU 39
CYS 40
0.0003
CYS 40
VAL 41
-0.0003
VAL 41
SER 42
0.0002
SER 42
CYS 43
-0.0003
CYS 43
LEU 44
0.0002
LEU 44
VAL 45
0.0001
VAL 45
VAL 46
-0.0001
VAL 46
ARG 47
-0.0002
ARG 47
GLY 1
0.0000
GLY 1
SER 2
0.0001
SER 2
HSD 3
0.0002
HSD 3
MET 4
-0.0004
MET 4
ALA 5
0.0000
ALA 5
ASP 6
0.0003
ASP 6
ARG 7
0.0000
ARG 7
ALA 8
0.0003
ALA 8
GLY 9
-0.0001
GLY 9
GLY 10
0.0004
GLY 10
PRO 11
-0.0004
PRO 11
VAL 12
0.0002
VAL 12
ALA 13
0.0000
ALA 13
THR 14
-0.0002
THR 14
SER 15
-0.0001
SER 15
VAL 16
-0.0000
VAL 16
PRO 17
-0.0003
PRO 17
ILE 18
0.0005
ILE 18
GLY 19
0.0000
GLY 19
TRP 20
-0.0001
TRP 20
GLN 21
-0.0003
GLN 21
ARG 22
0.0004
ARG 22
CYS 23
-0.0001
CYS 23
VAL 24
0.0003
VAL 24
ARG 25
0.0003
ARG 25
GLU 26
-0.0001
GLU 26
GLY 27
0.0001
GLY 27
ALA 28
-0.0004
ALA 28
VAL 29
-0.0000
VAL 29
LEU 30
0.0001
LEU 30
TYR 31
-0.0003
TYR 31
ILE 32
0.0001
ILE 32
SER 33
0.0001
SER 33
PRO 34
-0.0001
PRO 34
SER 35
-0.0002
SER 35
GLY 36
-0.0002
GLY 36
THR 37
-0.0003
THR 37
GLU 38
0.0004
GLU 38
LEU 39
0.0001
LEU 39
SER 40
-0.0002
SER 40
SER 41
-0.0005
SER 41
LEU 42
0.0006
LEU 42
GLU 43
-0.0003
GLU 43
GLN 44
0.0001
GLN 44
THR 45
-0.0003
THR 45
ARG 46
0.0002
ARG 46
SER 47
0.0000
SER 47
TYR 48
0.0001
TYR 48
LEU 49
0.0003
LEU 49
LEU 50
0.0001
LEU 50
SER 51
0.0002
SER 51
ASP 52
-0.0000
ASP 52
GLY 53
0.0001
GLY 53
THR 54
-0.0003
THR 54
CYS 55
-0.0002
CYS 55
LYS 56
0.0004
LYS 56
CYS 57
0.0001
CYS 57
GLY 58
-0.0004
GLY 58
LEU 59
-0.0003
LEU 59
GLU 60
-0.0001
GLU 60
CYS 61
0.0001
CYS 61
PRO 62
0.0006
PRO 62
LEU 63
-0.0002
LEU 63
ASN 64
-0.0001
ASN 64
VAL 65
0.0001
VAL 65
PRO 66
0.0000
PRO 66
LYS 67
0.0005
LYS 67
VAL 68
-0.0004
VAL 68
PHE 69
0.0001
PHE 69
ASN 70
0.0001
ASN 70
PHE 71
0.0001
PHE 71
ASP 72
-0.0001
ASP 72
PRO 73
-0.0001
PRO 73
LEU 74
-0.0001
LEU 74
ALA 75
-0.0003
ALA 75
PRO 76
0.0001
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.