CNRS Nantes University US2B US2B
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***  STRUCTURAL PROTEIN 13-JUL-98 1BKV  ***

CA strain for 2503022329511213460

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 3PRO 4 0.0361
PRO 4GLY 6 0.0174
GLY 6PRO 7 0.0096
PRO 7GLY 9 -0.0166
GLY 9ILE 10 -0.0752
ILE 10THR 11 -0.0772
THR 11GLY 12 0.0119
GLY 12ALA 13 -0.0504
ALA 13ARG 14 -0.1038
ARG 14GLY 15 -0.0011
GLY 15LEU 16 -0.0070
LEU 16ALA 17 -0.0285
ALA 17GLY 18 0.0034
GLY 18PRO 19 0.0221
PRO 19GLY 21 0.0200
GLY 21PRO 22 0.0263
PRO 22GLY 24 -0.0308
GLY 24PRO 25 -0.0385
PRO 25GLY 27 -0.0601
GLY 27PRO 28 0.0231
PRO 28GLY 30 -0.0022
GLY 30PRO 31 -0.0328
PRO 31GLY 33 0.0049
GLY 33PRO 34 0.0771
PRO 34GLY 36 0.0278
GLY 36PRO 37 0.2255
PRO 37GLY 39 0.1226
GLY 39ILE 40 0.0690
ILE 40THR 41 0.0359
THR 41GLY 42 -0.0010
GLY 42ALA 43 0.0247
ALA 43ARG 44 0.0176
ARG 44GLY 45 0.0068
GLY 45LEU 46 0.0135
LEU 46ALA 47 -0.0383
ALA 47GLY 48 0.0171
GLY 48PRO 49 0.0573
PRO 49GLY 51 0.0857
GLY 51PRO 52 0.2696
PRO 52GLY 54 0.1094
GLY 54PRO 55 0.0826
PRO 55GLY 57 0.0376
GLY 57PRO 58 0.0146
PRO 58GLY 60 -0.0138
GLY 60PRO 61 -0.0194
PRO 61GLY 63 -0.0128
GLY 63PRO 64 -0.0785
PRO 64GLY 66 -0.0334
GLY 66PRO 67 -0.0418
PRO 67GLY 69 -0.0326
GLY 69ILE 70 0.0297
ILE 70THR 71 -0.0233
THR 71GLY 72 0.0325
GLY 72ALA 73 0.0222
ALA 73ARG 74 0.0169
ARG 74GLY 75 0.0058
GLY 75LEU 76 -0.0059
LEU 76ALA 77 -0.0280
ALA 77GLY 78 0.0280
GLY 78PRO 79 0.0018
PRO 79GLY 81 -0.0070
GLY 81PRO 82 0.1247
PRO 82GLY 84 0.0614
GLY 84PRO 85 0.1441
PRO 85GLY 87 0.0347
GLY 87PRO 88 0.0252
PRO 88GLY 90 0.0262

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.