CNRS Nantes University US2B US2B
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***  STRUCTURAL PROTEIN 13-JUL-98 1BKV  ***

CA strain for 2503022329511213460

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 3PRO 4 -0.0033
PRO 4GLY 6 0.0054
GLY 6PRO 7 0.0430
PRO 7GLY 9 0.0232
GLY 9ILE 10 0.0500
ILE 10THR 11 0.0424
THR 11GLY 12 -0.0066
GLY 12ALA 13 0.0246
ALA 13ARG 14 0.0747
ARG 14GLY 15 -0.0069
GLY 15LEU 16 0.0056
LEU 16ALA 17 0.0233
ALA 17GLY 18 -0.0105
GLY 18PRO 19 -0.0072
PRO 19GLY 21 -0.0267
GLY 21PRO 22 -0.0592
PRO 22GLY 24 -0.0727
GLY 24PRO 25 -0.0412
PRO 25GLY 27 -0.0237
GLY 27PRO 28 0.0003
PRO 28GLY 30 0.0078
GLY 30PRO 31 0.0135
PRO 31GLY 33 -0.0030
GLY 33PRO 34 -0.0201
PRO 34GLY 36 -0.0115
GLY 36PRO 37 -0.0512
PRO 37GLY 39 -0.0267
GLY 39ILE 40 0.0023
ILE 40THR 41 -0.0203
THR 41GLY 42 0.0184
GLY 42ALA 43 0.0175
ALA 43ARG 44 -0.0092
ARG 44GLY 45 0.0088
GLY 45LEU 46 0.0093
LEU 46ALA 47 0.0342
ALA 47GLY 48 -0.0086
GLY 48PRO 49 0.0559
PRO 49GLY 51 0.0685
GLY 51PRO 52 0.0614
PRO 52GLY 54 0.0208
GLY 54PRO 55 -0.0056
PRO 55GLY 57 -0.0094
GLY 57PRO 58 -0.0043
PRO 58GLY 60 -0.0005
GLY 60PRO 61 -0.0579
PRO 61GLY 63 0.0014
GLY 63PRO 64 0.0144
PRO 64GLY 66 0.0026
GLY 66PRO 67 -0.0283
PRO 67GLY 69 -0.0197
GLY 69ILE 70 -0.0364
ILE 70THR 71 -0.0169
THR 71GLY 72 -0.0078
GLY 72ALA 73 -0.0299
ALA 73ARG 74 -0.0568
ARG 74GLY 75 0.0008
GLY 75LEU 76 -0.0056
LEU 76ALA 77 -0.0956
ALA 77GLY 78 0.0280
GLY 78PRO 79 0.0084
PRO 79GLY 81 0.0186
GLY 81PRO 82 0.0544
PRO 82GLY 84 0.0468
GLY 84PRO 85 0.0422
PRO 85GLY 87 0.0156
GLY 87PRO 88 0.0145
PRO 88GLY 90 0.0071

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.