CNRS Nantes University US2B US2B
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***  STRUCTURAL PROTEIN 13-JUL-98 1BKV  ***

CA strain for 2503022329511213460

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 3PRO 4 0.0116
PRO 4GLY 6 0.0087
GLY 6PRO 7 0.0281
PRO 7GLY 9 0.0070
GLY 9ILE 10 -0.0084
ILE 10THR 11 0.0086
THR 11GLY 12 -0.0126
GLY 12ALA 13 -0.0269
ALA 13ARG 14 -0.0029
ARG 14GLY 15 -0.0077
GLY 15LEU 16 -0.0269
LEU 16ALA 17 -0.0380
ALA 17GLY 18 0.0035
GLY 18PRO 19 -0.0293
PRO 19GLY 21 -0.0548
GLY 21PRO 22 -0.0174
PRO 22GLY 24 -0.0078
GLY 24PRO 25 0.0309
PRO 25GLY 27 0.0243
GLY 27PRO 28 0.0182
PRO 28GLY 30 0.0124
GLY 30PRO 31 -0.0807
PRO 31GLY 33 -0.0004
GLY 33PRO 34 -0.0026
PRO 34GLY 36 0.0014
GLY 36PRO 37 0.0306
PRO 37GLY 39 0.0216
GLY 39ILE 40 0.0294
ILE 40THR 41 0.0139
THR 41GLY 42 0.0013
GLY 42ALA 43 0.0327
ALA 43ARG 44 0.0646
ARG 44GLY 45 0.0001
GLY 45LEU 46 0.0020
LEU 46ALA 47 0.0377
ALA 47GLY 48 -0.0164
GLY 48PRO 49 -0.0187
PRO 49GLY 51 -0.0347
GLY 51PRO 52 -0.0784
PRO 52GLY 54 -0.0496
GLY 54PRO 55 -0.0367
PRO 55GLY 57 -0.0200
GLY 57PRO 58 -0.0084
PRO 58GLY 60 0.0037
GLY 60PRO 61 -0.1450
PRO 61GLY 63 -0.0053
GLY 63PRO 64 -0.0288
PRO 64GLY 66 -0.0156
GLY 66PRO 67 -0.0630
PRO 67GLY 69 -0.0341
GLY 69ILE 70 -0.0209
ILE 70THR 71 -0.0316
THR 71GLY 72 0.0222
GLY 72ALA 73 0.0034
ALA 73ARG 74 -0.0158
ARG 74GLY 75 0.0069
GLY 75LEU 76 0.0055
LEU 76ALA 77 0.0244
ALA 77GLY 78 -0.0051
GLY 78PRO 79 0.0754
PRO 79GLY 81 0.0791
GLY 81PRO 82 0.0350
PRO 82GLY 84 0.0205
GLY 84PRO 85 -0.0038
PRO 85GLY 87 -0.0036
GLY 87PRO 88 -0.0027
PRO 88GLY 90 -0.0043

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.