CNRS Nantes University US2B US2B
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***  Lyzozyme_1aki_clean_H  ***

CA strain for 250228134049613773

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0180
VAL 2PHE 3 0.0379
PHE 3GLY 4 -0.0569
GLY 4ARG 5 -0.2961
ARG 5CYS 6 0.6274
CYS 6GLU 7 -0.1643
GLU 7LEU 8 0.0399
LEU 8ALA 9 -0.0094
ALA 9ALA 10 0.0157
ALA 10ALA 11 -0.2259
ALA 11MET 12 0.0333
MET 12LYS 13 -0.1611
LYS 13ARG 14 0.0442
ARG 14HIS 15 -0.1675
HIS 15GLY 16 0.1421
GLY 16LEU 17 0.1014
LEU 17ASP 18 -0.0160
ASP 18ASN 19 -0.2151
ASN 19TYR 20 0.1330
TYR 20ARG 21 -0.1495
ARG 21GLY 22 0.1368
GLY 22TYR 23 0.0285
TYR 23SER 24 -0.1026
SER 24LEU 25 -0.0761
LEU 25GLY 26 0.0700
GLY 26ASN 27 -0.0194
ASN 27TRP 28 0.0691
TRP 28VAL 29 0.1068
VAL 29CYS 30 0.0631
CYS 30ALA 31 -0.0083
ALA 31ALA 32 0.0437
ALA 32LYS 33 -0.0254
LYS 33PHE 34 0.1798
PHE 34GLU 35 -0.2703
GLU 35SER 36 0.1773
SER 36ASN 37 -0.0680
ASN 37PHE 38 0.0764
PHE 38ASN 39 -0.1098
ASN 39THR 40 -0.0136
THR 40GLN 41 -0.0122
GLN 41ALA 42 -0.0141
ALA 42THR 43 -0.1633
THR 43ASN 44 -0.0735
ASN 44ARG 45 -0.0848
ARG 45ASN 46 -0.0390
ASN 46THR 47 0.0221
THR 47ASP 48 0.0459
ASP 48GLY 49 0.0443
GLY 49SER 50 0.0072
SER 50THR 51 -0.0929
THR 51ASP 52 -0.0580
ASP 52TYR 53 0.0145
TYR 53GLY 54 -0.1123
GLY 54ILE 55 -0.0979
ILE 55LEU 56 0.0844
LEU 56GLN 57 -0.0450
GLN 57ILE 58 -0.0889
ILE 58ASN 59 -0.0672
ASN 59SER 60 -0.0100
SER 60ARG 61 -0.0700
ARG 61TRP 62 0.0871
TRP 62TRP 63 -0.0208
TRP 63CYS 64 0.0662
CYS 64ASN 65 -0.0033
ASN 65ASP 66 -0.0106
ASP 66GLY 67 -0.0260
GLY 67ARG 68 -0.0130
ARG 68THR 69 0.0489
THR 69PRO 70 -0.0384
PRO 70GLY 71 0.0235
GLY 71SER 72 0.0044
SER 72ARG 73 0.0105
ARG 73ASN 74 0.0277
ASN 74LEU 75 -0.0010
LEU 75CYS 76 0.0271
CYS 76ASN 77 -0.0211
ASN 77ILE 78 -0.0075
ILE 78PRO 79 -0.0104
PRO 79CYS 80 -0.0069
CYS 80SER 81 0.0196
SER 81ALA 82 -0.0244
ALA 82LEU 83 -0.0037
LEU 83LEU 84 0.0560
LEU 84SER 85 -0.0574
SER 85SER 86 -0.0397
SER 86ASP 87 0.0453
ASP 87ILE 88 0.0144
ILE 88THR 89 -0.0101
THR 89ALA 90 -0.0699
ALA 90SER 91 0.0042
SER 91VAL 92 -0.0151
VAL 92ASN 93 -0.0359
ASN 93CYS 94 -0.0173
CYS 94ALA 95 0.0049
ALA 95LYS 96 0.0274
LYS 96LYS 97 -0.0384
LYS 97ILE 98 -0.0366
ILE 98VAL 99 0.1381
VAL 99SER 100 0.0406
SER 100ASP 101 0.0232
ASP 101GLY 102 0.1139
GLY 102ASN 103 0.0785
ASN 103GLY 104 -0.1966
GLY 104MET 105 0.0689
MET 105ASN 106 -0.1132
ASN 106ALA 107 0.0627
ALA 107TRP 108 0.1113
TRP 108VAL 109 -0.2355
VAL 109ALA 110 0.1233
ALA 110TRP 111 -0.0119
TRP 111ARG 112 0.0290
ARG 112ASN 113 0.0016
ASN 113ARG 114 0.0700
ARG 114CYS 115 0.0107
CYS 115LYS 116 -0.0245
LYS 116GLY 117 0.0114
GLY 117THR 118 0.0459
THR 118ASP 119 -0.0211
ASP 119VAL 120 0.0756
VAL 120GLN 121 -0.0786
GLN 121ALA 122 -0.0350
ALA 122TRP 123 -0.2447
TRP 123ILE 124 0.3570
ILE 124ARG 125 -0.0311
ARG 125GLY 126 0.0694
GLY 126CYS 127 -0.5045
CYS 127ARG 128 0.4409
ARG 128LEU 129 -0.3609

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.