CNRS Nantes University US2B US2B
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***  MSH2  ***

Normal Mode Analysis for ID 2502220316173414144

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.2141
mode 8 1.21 0.3102
mode 9 1.44 0.2765
mode 10 1.52 0.2431
mode 11 2.23 0.2564
mode 12 2.89 0.4216
mode 13 3.07 0.2459
mode 14 3.36 0.3851
mode 15 3.70 0.3212
mode 16 4.34 0.5376
mode 17 4.40 0.0291
mode 18 4.99 0.2597
mode 19 5.25 0.1301
mode 20 5.41 0.2677
mode 21 6.13 0.2516
mode 22 6.27 0.1155
mode 23 6.39 0.4552
mode 24 6.93 0.0993
mode 25 7.67 0.3782
mode 26 8.00 0.5020
mode 27 8.03 0.2800
mode 28 8.99 0.4800
mode 29 9.43 0.1083
mode 30 9.58 0.0780
mode 31 9.72 0.2105
mode 32 9.76 0.3894
mode 33 10.31 0.1860
mode 34 10.59 0.4444
mode 35 11.00 0.3268
mode 36 11.46 0.4609
mode 37 11.60 0.3570
mode 38 11.85 0.3298
mode 39 12.18 0.3040
mode 40 12.59 0.3780
mode 41 12.94 0.4150
mode 42 13.07 0.4152
mode 43 13.45 0.3585
mode 44 13.84 0.3334
mode 45 14.08 0.4170
mode 46 14.39 0.3856
mode 47 14.60 0.1735
mode 48 14.77 0.1403
mode 49 15.06 0.2719
mode 50 15.45 0.0682
mode 51 15.84 0.4177
mode 52 16.09 0.2915
mode 53 16.29 0.3487
mode 54 16.47 0.1932
mode 55 16.66 0.3464
mode 56 17.02 0.2596
mode 57 17.48 0.3580
mode 58 17.97 0.1337
mode 59 18.23 0.3342
mode 60 18.40 0.4853
mode 61 18.76 0.4676
mode 62 18.98 0.2231
mode 63 19.03 0.2745
mode 64 19.15 0.0960
mode 65 19.36 0.3478
mode 66 19.84 0.5044
mode 67 20.23 0.2380
mode 68 20.69 0.4059
mode 69 20.82 0.3906
mode 70 21.08 0.2789
mode 71 21.27 0.5465
mode 72 21.61 0.2448
mode 73 21.81 0.4352
mode 74 22.00 0.2337
mode 75 22.08 0.3079
mode 76 22.21 0.3039
mode 77 22.36 0.1950
mode 78 22.65 0.2615
mode 79 23.29 0.3786
mode 80 23.39 0.2341
mode 81 23.48 0.3292
mode 82 23.54 0.1604
mode 83 23.83 0.2163
mode 84 23.91 0.1387
mode 85 24.11 0.1374
mode 86 24.41 0.2785
mode 87 24.50 0.0760
mode 88 24.86 0.3928
mode 89 24.89 0.1017
mode 90 25.16 0.1611
mode 91 25.37 0.4256
mode 92 25.85 0.2786
mode 93 26.04 0.2892
mode 94 26.25 0.4065
mode 95 26.42 0.3385
mode 96 26.50 0.3585
mode 97 26.72 0.4103
mode 98 27.04 0.2095
mode 99 27.11 0.3337
mode 100 27.16 0.3452
mode 101 27.35 0.2060
mode 102 27.52 0.4706
mode 103 27.78 0.4567
mode 104 27.84 0.4226
mode 105 27.97 0.3192
mode 106 28.15 0.4256

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.