This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.1298
VAL 2
PHE 3
0.0054
PHE 3
GLU 4
0.1371
GLU 4
ARG 5
0.2280
ARG 5
CYS 6
-0.0748
CYS 6
GLU 7
0.0610
GLU 7
LEU 8
-0.0326
LEU 8
ALA 9
-0.0327
ALA 9
ARG 10
-0.0294
ARG 10
THR 11
-0.0107
THR 11
LEU 12
0.0129
LEU 12
LYS 13
-0.0229
LYS 13
ARG 14
-0.0238
ARG 14
LEU 15
-0.0235
LEU 15
GLY 16
-0.0392
GLY 16
MET 17
-0.0283
MET 17
ASP 18
-0.0647
ASP 18
GLY 19
-0.0011
GLY 19
TYR 20
-0.1550
TYR 20
ARG 21
0.1366
ARG 21
GLY 22
-0.1389
GLY 22
ILE 23
0.0637
ILE 23
SER 24
-0.1572
SER 24
LEU 25
-0.0035
LEU 25
ALA 26
-0.3613
ALA 26
ASN 27
-0.0397
ASN 27
TRP 28
-0.1256
TRP 28
MET 29
-0.0377
MET 29
CYS 30
-0.0149
CYS 30
LEU 31
-0.0623
LEU 31
ALA 32
-0.0074
ALA 32
LYS 33
0.0200
LYS 33
TRP 34
-0.0961
TRP 34
GLU 35
0.2563
GLU 35
SER 36
-0.0970
SER 36
GLY 37
-0.0107
GLY 37
TYR 38
-0.0579
TYR 38
ASN 39
0.2003
ASN 39
THR 40
0.1096
THR 40
ARG 41
-0.0578
ARG 41
ALA 42
-0.0684
ALA 42
THR 43
0.0695
THR 43
ASN 44
-0.1563
ASN 44
TYR 45
0.1498
TYR 45
ASN 46
-0.0137
ASN 46
ALA 47
0.0509
ALA 47
GLY 48
-0.0011
GLY 48
ASP 49
0.0818
ASP 49
ARG 50
-0.0063
ARG 50
SER 51
0.0161
SER 51
THR 52
0.0113
THR 52
ASP 53
0.0383
ASP 53
TYR 54
-0.0807
TYR 54
GLY 55
0.1392
GLY 55
ILE 56
0.0504
ILE 56
PHE 57
-0.0517
PHE 57
GLN 58
0.0252
GLN 58
ILE 59
0.0288
ILE 59
ASN 60
-0.1080
ASN 60
SER 61
-0.0477
SER 61
ARG 62
0.0209
ARG 62
TYR 63
-0.0262
TYR 63
TRP 64
0.0949
TRP 64
CYS 65
-0.1777
CYS 65
ASN 66
-0.1083
ASN 66
ASP 67
-0.1581
ASP 67
GLY 68
0.1386
GLY 68
LYS 69
-0.0716
LYS 69
THR 70
-0.0328
THR 70
PRO 71
0.0928
PRO 71
GLY 72
-0.0323
GLY 72
ALA 73
0.1785
ALA 73
VAL 74
-0.1351
VAL 74
ASN 75
0.1090
ASN 75
ALA 76
-0.2108
ALA 76
CYS 77
0.0843
CYS 77
HIS 78
-0.1106
HIS 78
LEU 79
0.1224
LEU 79
SER 80
-0.0834
SER 80
CYS 81
-0.0918
CYS 81
SER 82
0.0189
SER 82
ALA 83
-0.1314
ALA 83
LEU 84
0.0266
LEU 84
LEU 85
-0.0030
LEU 85
GLN 86
-0.1386
GLN 86
ASP 87
0.2475
ASP 87
ASN 88
-0.0529
ASN 88
ILE 89
-0.0586
ILE 89
ALA 90
0.0408
ALA 90
ASP 91
0.0165
ASP 91
ALA 92
0.0044
ALA 92
VAL 93
-0.0659
VAL 93
ALA 94
0.0495
ALA 94
CYS 95
0.0055
CYS 95
ALA 96
-0.1002
ALA 96
LYS 97
0.0607
LYS 97
ARG 98
-0.0784
ARG 98
VAL 99
-0.0588
VAL 99
VAL 100
-0.1137
VAL 100
ARG 101
-0.0052
ARG 101
ASP 102
0.0432
ASP 102
PRO 103
-0.0510
PRO 103
GLN 104
0.0182
GLN 104
GLY 105
0.1075
GLY 105
ILE 106
-0.1456
ILE 106
ARG 107
0.1276
ARG 107
ALA 108
-0.2294
ALA 108
TRP 109
0.0301
TRP 109
VAL 110
0.0258
VAL 110
ALA 111
-0.0184
ALA 111
TRP 112
0.0165
TRP 112
ARG 113
0.0068
ARG 113
ASN 114
-0.0159
ASN 114
ARG 115
-0.0159
ARG 115
CYS 116
0.0016
CYS 116
GLN 117
0.0608
GLN 117
ASN 118
-0.0122
ASN 118
ARG 119
-0.0470
ARG 119
ASP 120
0.0556
ASP 120
VAL 121
-0.0888
VAL 121
ARG 122
-0.0885
ARG 122
GLN 123
0.0423
GLN 123
TYR 124
0.1951
TYR 124
VAL 125
-0.0123
VAL 125
GLN 126
-0.1005
GLN 126
GLY 127
0.1445
GLY 127
CYS 128
0.0418
CYS 128
GLY 129
0.0058
GLY 129
VAL 130
0.0413
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.