This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
VAL 2
0.0426
VAL 2
ASN 3
-0.0309
ASN 3
PRO 4
0.0760
PRO 4
THR 5
-0.1250
THR 5
VAL 6
-0.0943
VAL 6
PHE 7
-0.0502
PHE 7
PHE 8
-0.0526
PHE 8
ASP 9
-0.0074
ASP 9
ILE 10
-0.0386
ILE 10
ALA 11
-0.0424
ALA 11
VAL 12
-0.0312
VAL 12
ASP 13
-0.0166
ASP 13
GLY 14
-0.0034
GLY 14
GLU 15
-0.0007
GLU 15
PRO 16
-0.0135
PRO 16
LEU 17
0.0111
LEU 17
GLY 18
-0.0366
GLY 18
ARG 19
-0.0745
ARG 19
VAL 20
-0.0082
VAL 20
SER 21
-0.0737
SER 21
PHE 22
-0.0289
PHE 22
GLU 23
-0.0397
GLU 23
LEU 24
-0.0106
LEU 24
PHE 25
-0.0226
PHE 25
ALA 26
0.0768
ALA 26
ASP 27
-0.1052
ASP 27
LYS 28
0.4735
LYS 28
VAL 29
-0.0264
VAL 29
PRO 30
-0.0277
PRO 30
LYS 31
0.0583
LYS 31
THR 32
-0.0131
THR 32
ALA 33
0.0114
ALA 33
GLU 34
-0.0025
GLU 34
ASN 35
0.0248
ASN 35
PHE 36
-0.0059
PHE 36
ARG 37
0.0058
ARG 37
ALA 38
0.0111
ALA 38
LEU 39
0.0009
LEU 39
SER 40
0.0026
SER 40
THR 41
0.0067
THR 41
GLY 42
0.0045
GLY 42
GLU 43
-0.0037
GLU 43
LYS 44
-0.0016
LYS 44
GLY 45
-0.0117
GLY 45
PHE 46
0.0018
PHE 46
GLY 47
0.0025
GLY 47
TYR 48
0.0060
TYR 48
LYS 49
0.0100
LYS 49
GLY 50
-0.0181
GLY 50
SER 51
0.0005
SER 51
CYS 52
-0.0086
CYS 52
CYS 52
0.0028
CYS 52
PHE 53
-0.0115
PHE 53
HIS 54
-0.0161
HIS 54
ARG 55
-0.0156
ARG 55
ILE 56
-0.0087
ILE 56
ILE 57
0.0076
ILE 57
PRO 58
-0.0121
PRO 58
GLY 59
0.0140
GLY 59
PHE 60
0.0068
PHE 60
MET 61
-0.0115
MET 61
CYS 62
0.0010
CYS 62
GLN 63
-0.0097
GLN 63
GLY 64
-0.0023
GLY 64
GLY 65
-0.0066
GLY 65
ASP 66
-0.0107
ASP 66
PHE 67
-0.0064
PHE 67
THR 68
-0.0023
THR 68
ARG 69
-0.0017
ARG 69
ARG 69
-0.0222
ARG 69
HIS 70
0.0048
HIS 70
ASN 71
-0.0071
ASN 71
GLY 72
0.0088
GLY 72
THR 73
-0.0114
THR 73
GLY 74
0.0107
GLY 74
GLY 75
0.0061
GLY 75
LYS 76
0.0185
LYS 76
SER 77
0.0181
SER 77
ILE 78
-0.0040
ILE 78
TYR 79
-0.0128
TYR 79
GLY 80
0.0271
GLY 80
GLU 81
0.0247
GLU 81
LYS 82
0.0033
LYS 82
LYS 82
-0.0384
LYS 82
PHE 83
0.0176
PHE 83
GLU 84
0.0006
GLU 84
ASP 85
-0.0253
ASP 85
GLU 86
0.0547
GLU 86
ASN 87
-0.0211
ASN 87
PHE 88
0.0124
PHE 88
ILE 89
0.0539
ILE 89
LEU 90
-0.0247
LEU 90
LYS 91
0.0665
LYS 91
HIS 92
0.0155
HIS 92
THR 93
-0.0179
THR 93
GLY 94
-0.0043
GLY 94
PRO 95
-0.0073
PRO 95
GLY 96
0.0012
GLY 96
ILE 97
-0.0137
ILE 97
LEU 98
0.0062
LEU 98
SER 99
-0.0196
SER 99
MET 100
-0.0194
MET 100
ALA 101
0.0392
ALA 101
ASN 102
0.0123
ASN 102
ALA 103
0.0139
ALA 103
GLY 104
0.0031
GLY 104
PRO 105
0.0051
PRO 105
ASN 106
0.0008
ASN 106
THR 107
0.0052
THR 107
ASN 108
0.0034
ASN 108
GLY 109
0.0102
GLY 109
SER 110
0.0062
SER 110
GLN 111
0.0019
GLN 111
PHE 112
-0.0038
PHE 112
PHE 113
-0.0141
PHE 113
ILE 114
-0.0015
ILE 114
CYS 115
-0.0051
CYS 115
THR 116
0.0075
THR 116
ALA 117
0.0092
ALA 117
LYS 118
-0.0024
LYS 118
THR 119
-0.0075
THR 119
GLU 120
0.0129
GLU 120
TRP 121
-0.0040
TRP 121
LEU 122
-0.0104
LEU 122
ASP 123
0.0337
ASP 123
GLY 124
-0.0153
GLY 124
LYS 125
-0.0009
LYS 125
HIS 126
0.0035
HIS 126
VAL 127
0.0119
VAL 127
VAL 128
-0.0144
VAL 128
PHE 129
-0.0024
PHE 129
GLY 130
-0.0180
GLY 130
LYS 131
-0.0084
LYS 131
VAL 132
-0.0170
VAL 132
LYS 133
-0.0089
LYS 133
GLU 134
-0.0455
GLU 134
GLY 135
-0.0445
GLY 135
MET 136
0.0378
MET 136
ASN 137
-0.0189
ASN 137
ILE 138
0.0135
ILE 138
VAL 139
0.0187
VAL 139
GLU 140
-0.0052
GLU 140
ALA 141
0.0107
ALA 141
MET 142
0.0134
MET 142
GLU 143
0.0103
GLU 143
ARG 144
0.0100
ARG 144
ARG 144
-0.0055
ARG 144
PHE 145
-0.0012
PHE 145
GLY 146
0.0085
GLY 146
SER 147
-0.0244
SER 147
ARG 148
-0.0447
ARG 148
ASN 149
0.0091
ASN 149
GLY 150
-0.0047
GLY 150
LYS 151
0.0160
LYS 151
LYS 151
0.1922
LYS 151
THR 152
-0.0164
THR 152
SER 153
0.0304
SER 153
LYS 154
-0.0105
LYS 154
LYS 155
0.0114
LYS 155
ILE 156
-0.0018
ILE 156
THR 157
-0.0242
THR 157
ILE 158
-0.0290
ILE 158
ALA 159
0.0020
ALA 159
ASP 160
-0.0392
ASP 160
CYS 161
-0.0081
CYS 161
GLY 162
-0.0343
GLY 162
GLN 163
-0.0328
GLN 163
LEU 164
0.0077
LEU 164
GLU 165
0.0118
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.