CNRS Nantes University US2B US2B
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Normal Mode Analysis for ID 2502100328103293503

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1721
mode 8 1.39 0.3798
mode 9 1.61 0.2577
mode 10 1.66 0.5583
mode 11 4.12 0.0371
mode 12 4.75 0.3498
mode 13 5.06 0.2373
mode 14 5.65 0.0998
mode 15 8.17 0.0955
mode 16 8.40 0.0851
mode 17 9.23 0.2723
mode 18 9.51 0.1548
mode 19 10.71 0.2695
mode 20 13.67 0.2106
mode 21 14.61 0.2770
mode 22 16.55 0.3710
mode 23 17.14 0.2886
mode 24 18.49 0.1493
mode 25 18.70 0.2893
mode 26 19.21 0.2799
mode 27 19.88 0.3087
mode 28 22.17 0.3903
mode 29 22.51 0.3040
mode 30 23.77 0.0231
mode 31 24.41 0.4603
mode 32 25.80 0.0647
mode 33 27.05 0.2269
mode 34 27.42 0.3065
mode 35 29.14 0.1800
mode 36 30.40 0.4777
mode 37 30.61 0.3714
mode 38 32.14 0.3673
mode 39 32.90 0.2106
mode 40 33.63 0.2297
mode 41 34.19 0.2140
mode 42 36.03 0.3553
mode 43 36.50 0.4272
mode 44 38.30 0.1893
mode 45 38.90 0.2971
mode 46 39.32 0.0474
mode 47 39.72 0.1275
mode 48 40.93 0.5697
mode 49 43.48 0.4412
mode 50 45.07 0.3750
mode 51 45.41 0.2736
mode 52 46.50 0.3407
mode 53 47.22 0.3828
mode 54 47.54 0.1598
mode 55 48.78 0.3966
mode 56 49.27 0.2322
mode 57 50.06 0.2536
mode 58 50.81 0.3661
mode 59 52.04 0.1954
mode 60 53.46 0.4701
mode 61 54.29 0.4081
mode 62 56.38 0.3536
mode 63 57.09 0.2233
mode 64 57.71 0.1796
mode 65 58.79 0.2536
mode 66 59.46 0.3437
mode 67 60.47 0.3059
mode 68 61.40 0.1389
mode 69 61.63 0.0636
mode 70 61.85 0.3201
mode 71 63.10 0.2955
mode 72 63.68 0.3036
mode 73 64.06 0.1799
mode 74 64.70 0.2748
mode 75 65.34 0.3770
mode 76 65.83 0.3699
mode 77 65.89 0.2750
mode 78 67.44 0.3525
mode 79 68.40 0.2113
mode 80 69.57 0.1940
mode 81 70.00 0.3021
mode 82 70.45 0.4399
mode 83 71.64 0.2603
mode 84 72.27 0.1222
mode 85 73.38 0.2521
mode 86 75.06 0.3710
mode 87 75.27 0.3363
mode 88 76.04 0.3078
mode 89 76.83 0.1071
mode 90 77.37 0.3293
mode 91 77.58 0.4847
mode 92 78.53 0.2469
mode 93 78.89 0.4117
mode 94 79.57 0.2887
mode 95 79.76 0.2219
mode 96 80.83 0.3800
mode 97 80.90 0.3551
mode 98 82.30 0.2332
mode 99 82.92 0.1014
mode 100 83.20 0.1277
mode 101 83.67 0.3127
mode 102 84.42 0.4555
mode 103 84.76 0.4015
mode 104 85.25 0.1968
mode 105 85.75 0.3329
mode 106 86.20 0.3853

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.