Should you encounter any unexpected behaviour,
please let us know.

* *

CA distance fluctuations for EXAMPLE3

--- normal mode 10 ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok

largest increase ref largest decrease
ASP 22 0.62 LEU 5 -0.19 GLY 117

ASP 22 0.49 VAL 6 -0.20 ASP 30

ASP 22 0.44 VAL 7 -0.22 GLY 117

LEU 23 0.25 ALA 8 -0.23 GLY 117

LEU 23 0.17 THR 9 -0.30 GLY 117

PHE 13 0.24 ASP 10 -0.35 GLY 117

PRO 47 0.21 THR 11 -0.42 PRO 137

ALA 33 0.18 ALA 12 -0.54 PRO 137

ASP 49 0.26 PHE 13 -0.53 ASN 138

PRO 15 0.21 VAL 14 -0.59 ASN 138

VAL 14 0.21 PRO 15 -0.45 ASN 138

ASP 49 0.13 PHE 16 -0.40 ASN 138

ALA 33 0.20 GLU 17 -0.44 ASN 138

ALA 33 0.29 PHE 18 -0.57 ASN 138

ALA 33 0.51 LYS 19 -0.72 ASN 138

ALA 33 0.61 GLN 20 -0.77 ASN 138

LYS 37 0.77 GLY 21 -0.85 ASN 138

LYS 37 1.00 ASP 22 -0.69 ASN 138

ALA 33 1.02 LEU 23 -0.54 ASN 138

ALA 33 0.83 TYR 24 -0.47 ASN 138

ALA 33 0.43 VAL 25 -0.43 ASN 138

THR 212 0.23 GLY 26 -0.38 ASN 138

TYR 24 0.24 PHE 27 -0.33 ASN 138

TYR 24 0.37 ASP 28 -0.32 THR 118

TYR 24 0.56 VAL 29 -0.32 LEU 45

LEU 23 0.50 ASP 30 -0.29 LEU 45

LEU 23 0.56 LEU 31 -0.31 THR 118

LEU 23 0.71 TRP 32 -0.28 THR 118

LEU 23 1.02 ALA 33 -0.25 ILE 216

LEU 23 0.85 ALA 34 -0.31 TYR 213

LEU 23 0.76 ILE 35 -0.28 THR 118

LEU 23 0.90 ALA 36 -0.24 THR 118

ASP 22 1.00 LYS 37 -0.25 TYR 213

ASP 22 0.84 GLU 38 -0.25 THR 118

ASP 22 0.83 LEU 39 -0.24 THR 118

ASP 22 0.97 LYS 40 -0.21 THR 118

ASP 22 0.91 LEU 41 -0.21 THR 118

ASP 22 0.97 ASP 42 -0.21 ILE 216

ASP 22 0.82 TYR 43 -0.20 ASP 30

ASP 22 0.70 GLU 44 -0.26 ASP 30

ASP 22 0.51 LEU 45 -0.32 VAL 29

ASP 22 0.26 LYS 46 -0.22 VAL 29

THR 11 0.21 PRO 47 -0.26 PRO 137

PHE 13 0.18 MET 48 -0.20 GLU 74

PHE 13 0.26 ASP 49 -0.26 GLU 74

PRO 159 0.27 PHE 50 -0.30 GLU 74

ASN 160 0.30 SER 51 -0.34 GLU 74

ASN 160 0.22 GLY 52 -0.22 GLU 74

PRO 159 0.18 ILE 53 -0.17 GLU 74

ILE 69 0.22 ILE 54 -0.20 ALA 78

GLY 89 0.23 PRO 55 -0.10 ALA 78

GLY 89 0.15 ALA 56 -0.10 LEU 5

ASP 22 0.17 LEU 57 -0.12 GLY 117

THR 70 0.15 GLN 58 -0.08 LYS 40

ASP 22 0.15 THR 59 -0.10 LYS 40

ASP 22 0.24 LYS 60 -0.12 LEU 41

ASP 22 0.22 ASN 61 -0.15 LEU 5

ASP 22 0.29 VAL 62 -0.14 LEU 5

ASP 22 0.39 ASP 63 -0.17 GLY 117

LEU 23 0.37 LEU 64 -0.22 GLY 117

LEU 23 0.31 ALA 65 -0.26 GLY 117

LEU 23 0.30 LEU 66 -0.32 GLY 117

TYR 24 0.16 ALA 67 -0.37 GLY 117

SER 51 0.15 GLY 68 -0.44 THR 118

ILE 54 0.22 ILE 69 -0.41 GLY 117

ILE 54 0.21 THR 70 -0.50 THR 118

LYS 87 0.19 ILE 71 -0.44 THR 118

GLN 183 0.28 THR 72 -0.45 GLY 117

ALA 182 0.24 ASP 73 -0.41 GLY 117

ALA 182 0.29 GLU 74 -0.34 GLY 117

ALA 182 0.21 ARG 75 -0.31 GLY 117

GLU 224 0.14 LYS 76 -0.30 GLY 117

ALA 182 0.14 LYS 77 -0.26 SER 51

ALA 182 0.16 ALA 78 -0.25 SER 51

LEU 23 0.17 ILE 79 -0.23 GLY 117

LEU 23 0.24 ASP 80 -0.27 GLY 117

LEU 23 0.28 PHE 81 -0.32 GLY 117

LEU 23 0.37 SER 82 -0.33 THR 118

LEU 23 0.34 ASP 83 -0.36 GLY 119

LEU 23 0.25 GLY 84 -0.41 GLY 119

LEU 23 0.28 TYR 85 -0.34 THR 118

ASP 73 0.18 TYR 86 -0.37 THR 118

THR 72 0.24 LYS 87 -0.36 LYS 205

SER 51 0.23 SER 88 -0.41 GLY 119

SER 51 0.27 GLY 89 -0.35 SER 88

SER 51 0.26 LEU 90 -0.31 GLU 209

SER 51 0.22 LEU 91 -0.32 GLU 209

SER 51 0.19 VAL 92 -0.33 GLY 21

SER 51 0.19 MET 93 -0.38 GLY 21

SER 51 0.17 VAL 94 -0.38 GLY 21

SER 51 0.16 LYS 95 -0.39 GLY 21

SER 51 0.17 ALA 96 -0.31 GLY 21

SER 51 0.15 ASN 97 -0.30 GLY 21

SER 51 0.14 ASN 98 -0.31 GLY 21

SER 51 0.14 ASN 99 -0.24 GLY 21

SER 51 0.13 ASP 100 -0.27 GLY 21

SER 51 0.14 VAL 101 -0.28 GLY 21

SER 51 0.15 LYS 102 -0.26 GLU 209

SER 51 0.14 SER 103 -0.27 GLU 209

SER 51 0.12 VAL 104 -0.27 GLY 21

SER 51 0.10 LYS 105 -0.33 GLY 21

PRO 55 0.07 ASP 106 -0.35 GLY 21

PRO 55 0.06 LEU 107 -0.34 GLY 21

PRO 55 0.06 ASP 108 -0.34 GLY 21

PRO 55 0.05 GLY 109 -0.39 GLY 21

PRO 55 0.06 LYS 110 -0.41 GLY 21

SER 51 0.06 VAL 111 -0.47 GLY 21

SER 51 0.07 VAL 112 -0.49 GLY 21

SER 51 0.07 ALA 113 -0.57 GLY 21

SER 51 0.07 VAL 114 -0.58 GLY 21

ALA 142 0.06 LYS 115 -0.66 GLY 21

MET 144 0.05 SER 116 -0.65 GLY 21

ASN 138 0.06 GLY 117 -0.59 GLY 21

ILE 139 0.07 THR 118 -0.52 GLY 21

PRO 55 0.11 GLY 119 -0.55 GLN 183

SER 51 0.12 SER 120 -0.44 GLY 21

PRO 55 0.05 VAL 121 -0.48 GLY 21

PRO 55 0.06 ASP 122 -0.42 GLN 183

PRO 55 0.11 TYR 123 -0.35 GLY 21

PRO 55 0.09 ALA 124 -0.39 GLY 21

PRO 55 0.05 LYS 125 -0.40 GLY 21

PRO 55 0.07 ALA 126 -0.33 GLY 21

PRO 55 0.10 ASN 127 -0.30 GLY 21

PRO 55 0.08 ILE 128 -0.34 GLY 21

PRO 55 0.06 LYS 129 -0.36 GLY 21

PRO 55 0.05 THR 130 -0.41 GLY 21

PRO 55 0.04 LYS 131 -0.43 GLY 21

ASP 100 0.03 ASP 132 -0.49 GLY 21

VAL 101 0.04 LEU 133 -0.51 GLY 21

ASN 98 0.03 ARG 134 -0.59 GLY 21

ALA 151 0.04 GLN 135 -0.64 GLY 21

GLU 145 0.05 PHE 136 -0.74 GLY 21

GLU 145 0.05 PRO 137 -0.82 GLY 21

GLY 117 0.06 ASN 138 -0.85 GLY 21

SER 51 0.13 ILE 139 -0.75 GLY 21

SER 51 0.13 ASP 140 -0.85 GLY 21

SER 51 0.07 ASN 141 -0.82 GLY 21

SER 51 0.10 ALA 142 -0.70 GLY 21

SER 51 0.15 TYR 143 -0.67 GLY 21

SER 51 0.12 MET 144 -0.73 GLY 21

SER 51 0.08 GLU 145 -0.66 GLY 21

SER 51 0.11 LEU 146 -0.57 GLY 21

SER 51 0.12 GLY 147 -0.61 GLY 21

SER 51 0.09 THR 148 -0.59 GLY 21

SER 51 0.08 ASN 149 -0.53 GLY 21

SER 51 0.06 ARG 150 -0.56 GLY 21

SER 51 0.08 ALA 151 -0.53 GLY 21

SER 51 0.10 ASP 152 -0.45 GLY 21

SER 51 0.13 ALA 153 -0.44 GLY 21

SER 51 0.14 VAL 154 -0.49 GLY 21

SER 51 0.18 LEU 155 -0.43 GLY 21

SER 51 0.22 HIS 156 -0.45 GLY 21

SER 51 0.28 ASP 157 -0.36 GLY 21

SER 51 0.28 THR 158 -0.29 GLU 209

SER 51 0.29 PRO 159 -0.28 GLY 21

SER 51 0.30 ASN 160 -0.43 GLY 21

SER 51 0.26 ILE 161 -0.41 GLY 21

SER 51 0.24 LEU 162 -0.31 GLY 21

SER 51 0.23 TYR 163 -0.37 GLY 21

SER 51 0.26 PHE 164 -0.49 GLY 21

SER 51 0.22 ILE 165 -0.39 GLY 21

SER 51 0.19 LYS 166 -0.35 GLY 21

SER 51 0.20 THR 167 -0.47 GLY 21

SER 51 0.23 ALA 168 -0.57 GLY 21

SER 51 0.22 GLY 169 -0.49 GLY 21

SER 51 0.19 ASN 170 -0.38 GLY 21

SER 51 0.18 GLY 171 -0.35 GLY 21

SER 51 0.18 GLN 172 -0.40 GLY 21

SER 51 0.19 PHE 173 -0.39 GLY 21

SER 51 0.20 LYS 174 -0.31 GLY 21

SER 51 0.20 ALA 175 -0.28 GLY 21

SER 51 0.19 VAL 176 -0.29 GLU 209

SER 51 0.18 GLY 177 -0.35 GLU 209

GLU 74 0.21 ASP 178 -0.39 GLU 209

SER 51 0.22 SER 179 -0.39 GLU 209

GLU 74 0.23 LEU 180 -0.35 GLU 209

GLU 74 0.26 GLU 181 -0.32 GLU 209

GLU 74 0.29 ALA 182 -0.36 LYS 205

THR 72 0.28 GLN 183 -0.55 GLY 119

THR 72 0.22 GLN 184 -0.44 GLY 119

LEU 23 0.17 TYR 185 -0.44 THR 118

LEU 23 0.25 GLY 186 -0.38 THR 118

LEU 23 0.33 ILE 187 -0.32 THR 118

LEU 23 0.27 ALA 188 -0.28 GLY 117

LEU 23 0.31 PHE 189 -0.23 GLY 117

ASP 22 0.26 PRO 190 -0.18 GLY 117

ASP 22 0.26 LYS 191 -0.19 GLY 117

ASP 22 0.32 GLY 192 -0.18 GLY 117

ASP 22 0.40 SER 193 -0.20 GLY 117

ASP 22 0.41 ASP 194 -0.23 GLY 117

ASP 22 0.50 GLU 195 -0.22 THR 118

ASP 22 0.54 LEU 196 -0.23 THR 118

ASP 22 0.46 ARG 197 -0.26 THR 118

ASP 22 0.48 ASP 198 -0.27 THR 118

ASP 22 0.58 LYS 199 -0.26 THR 118

LEU 23 0.56 VAL 200 -0.29 THR 118

LEU 23 0.48 ASN 201 -0.32 GLY 119

ASP 22 0.54 GLY 202 -0.30 GLY 119

ASP 22 0.61 ALA 203 -0.27 GLY 119

LEU 23 0.53 LEU 204 -0.33 LYS 87

LEU 23 0.48 LYS 205 -0.36 ALA 182

ASP 22 0.58 THR 206 -0.30 SER 179

LEU 23 0.55 LEU 207 -0.28 GLY 119

LEU 23 0.43 ARG 208 -0.37 SER 179

ASP 22 0.47 GLU 209 -0.39 ASP 178

ASP 22 0.54 ASN 210 -0.32 ASP 178

ASP 22 0.42 GLY 211 -0.29 ASP 178

LEU 23 0.50 THR 212 -0.22 THR 118

LEU 23 0.37 TYR 213 -0.31 ALA 34

LEU 23 0.26 ASN 214 -0.24 ALA 34

ASP 22 0.25 GLU 215 -0.28 ALA 34

LEU 23 0.27 ILE 216 -0.31 ALA 34

LEU 23 0.16 TYR 217 -0.27 ALA 34

ASP 73 0.13 LYS 218 -0.22 ALA 34

LYS 218 0.11 LYS 219 -0.23 ASN 138

SER 51 0.13 TRP 220 -0.28 ASN 138

SER 51 0.17 PHE 221 -0.24 ASN 138

SER 51 0.14 GLY 222 -0.19 ALA 34

ASP 73 0.18 THR 223 -0.20 ASN 170

ASP 73 0.21 GLU 224 -0.27 GLY 211

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** ***

CA distance fluctuations for EXAMPLE3

--- normal mode 10 ---

Should you encounter any unexpected behaviour,
please let us know.

* *