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CA strain for EXAMPLE3

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LEU 5VAL 6 0.0001
VAL 6VAL 7 -0.0047
VAL 7ALA 8 0.0002
ALA 8THR 9 -0.0357
THR 9ASP 10 0.0000
ASP 10THR 11 0.0286
THR 11ALA 12 -0.0001
ALA 12PHE 13 0.0594
PHE 13VAL 14 0.0000
VAL 14PRO 15 -0.0070
PRO 15PHE 16 0.0000
PHE 16GLU 17 0.0179
GLU 17PHE 18 0.0003
PHE 18LYS 19 0.0568
LYS 19GLN 20 -0.0004
GLN 20GLY 21 -0.0048
GLY 21ASP 22 0.0004
ASP 22LEU 23 -0.0168
LEU 23TYR 24 -0.0001
TYR 24VAL 25 -0.0526
VAL 25GLY 26 -0.0000
GLY 26PHE 27 -0.0390
PHE 27ASP 28 0.0002
ASP 28VAL 29 -0.0030
VAL 29ASP 30 -0.0001
ASP 30LEU 31 0.0002
LEU 31TRP 32 0.0003
TRP 32ALA 33 -0.0102
ALA 33ALA 34 -0.0000
ALA 34ILE 35 0.0149
ILE 35ALA 36 -0.0002
ALA 36LYS 37 -0.0123
LYS 37GLU 38 0.0004
GLU 38LEU 39 0.0197
LEU 39LYS 40 -0.0001
LYS 40LEU 41 0.0045
LEU 41ASP 42 -0.0003
ASP 42TYR 43 0.0013
TYR 43GLU 44 0.0001
GLU 44LEU 45 0.0108
LEU 45LYS 46 -0.0004
LYS 46PRO 47 0.0006
PRO 47MET 48 -0.0001
MET 48ASP 49 0.0333
ASP 49PHE 50 0.0001
PHE 50SER 51 -0.0097
SER 51GLY 52 0.0001
GLY 52ILE 53 0.0147
ILE 53ILE 54 -0.0002
ILE 54PRO 55 0.0185
PRO 55ALA 56 -0.0004
ALA 56LEU 57 0.0008
LEU 57GLN 58 0.0001
GLN 58THR 59 0.0068
THR 59LYS 60 -0.0002
LYS 60ASN 61 -0.0032
ASN 61VAL 62 0.0002
VAL 62ASP 63 0.0016
ASP 63LEU 64 -0.0001
LEU 64ALA 65 -0.0182
ALA 65LEU 66 0.0001
LEU 66ALA 67 -0.0312
ALA 67GLY 68 0.0003
GLY 68ILE 69 -0.0899
ILE 69THR 70 -0.0001
THR 70ILE 71 -0.0486
ILE 71THR 72 0.0004
THR 72ASP 73 -0.0062
ASP 73GLU 74 0.0003
GLU 74ARG 75 -0.0312
ARG 75LYS 76 -0.0003
LYS 76LYS 77 0.0045
LYS 77ALA 78 -0.0003
ALA 78ILE 79 -0.0027
ILE 79ASP 80 0.0000
ASP 80PHE 81 0.0027
PHE 81SER 82 0.0001
SER 82ASP 83 -0.0020
ASP 83GLY 84 -0.0001
GLY 84TYR 85 0.0284
TYR 85TYR 86 -0.0000
TYR 86LYS 87 -0.0912
LYS 87SER 88 0.0001
SER 88GLY 89 -0.1063
GLY 89LEU 90 -0.0001
LEU 90LEU 91 -0.0113
LEU 91VAL 92 0.0001
VAL 92MET 93 0.0215
MET 93VAL 94 -0.0001
VAL 94LYS 95 0.0139
LYS 95ALA 96 -0.0001
ALA 96ASN 97 0.0076
ASN 97ASN 98 0.0002
ASN 98ASN 99 0.0007
ASN 99ASP 100 0.0000
ASP 100VAL 101 0.0308
VAL 101LYS 102 0.0002
LYS 102SER 103 0.0277
SER 103VAL 104 -0.0001
VAL 104LYS 105 0.0128
LYS 105ASP 106 0.0002
ASP 106LEU 107 -0.0018
LEU 107ASP 108 -0.0001
ASP 108GLY 109 -0.0006
GLY 109LYS 110 0.0003
LYS 110VAL 111 0.0104
VAL 111VAL 112 0.0000
VAL 112ALA 113 0.0117
ALA 113VAL 114 -0.0000
VAL 114LYS 115 0.0039
LYS 115SER 116 -0.0001
SER 116GLY 117 -0.0093
GLY 117THR 118 -0.0001
THR 118GLY 119 -0.0995
GLY 119SER 120 -0.0002
SER 120VAL 121 -0.0087
VAL 121ASP 122 0.0000
ASP 122TYR 123 -0.0499
TYR 123ALA 124 -0.0005
ALA 124LYS 125 -0.0148
LYS 125ALA 126 -0.0002
ALA 126ASN 127 -0.0027
ASN 127ILE 128 -0.0000
ILE 128LYS 129 0.0040
LYS 129THR 130 0.0002
THR 130LYS 131 -0.0136
LYS 131ASP 132 0.0000
ASP 132LEU 133 0.0020
LEU 133ARG 134 -0.0002
ARG 134GLN 135 0.0066
GLN 135PHE 136 0.0000
PHE 136PRO 137 0.0013
PRO 137ASN 138 0.0000
ASN 138ILE 139 -0.0020
ILE 139ASP 140 -0.0001
ASP 140ASN 141 0.0138
ASN 141ALA 142 0.0001
ALA 142TYR 143 0.0628
TYR 143MET 144 -0.0002
MET 144GLU 145 0.0102
GLU 145LEU 146 -0.0001
LEU 146GLY 147 0.0005
GLY 147THR 148 -0.0002
THR 148ASN 149 -0.0043
ASN 149ARG 150 0.0001
ARG 150ALA 151 -0.0014
ALA 151ASP 152 0.0001
ASP 152ALA 153 0.0080
ALA 153VAL 154 0.0003
VAL 154LEU 155 -0.0357
LEU 155HIS 156 0.0002
HIS 156ASP 157 -0.1073
ASP 157THR 158 0.0002
THR 158PRO 159 0.0744
PRO 159ASN 160 -0.0001
ASN 160ILE 161 -0.0314
ILE 161LEU 162 0.0003
LEU 162TYR 163 -0.0806
TYR 163PHE 164 0.0001
PHE 164ILE 165 -0.0202
ILE 165LYS 166 -0.0001
LYS 166THR 167 0.1248
THR 167ALA 168 0.0001
ALA 168GLY 169 -0.0781
GLY 169ASN 170 0.0004
ASN 170GLY 171 -0.0477
GLY 171GLN 172 0.0001
GLN 172PHE 173 0.0259
PHE 173LYS 174 -0.0001
LYS 174ALA 175 0.0547
ALA 175VAL 176 -0.0002
VAL 176GLY 177 0.0908
GLY 177ASP 178 0.0001
ASP 178SER 179 0.0912
SER 179LEU 180 -0.0002
LEU 180GLU 181 0.0979
GLU 181ALA 182 0.0004
ALA 182GLN 183 0.1137
GLN 183GLN 184 0.0001
GLN 184TYR 185 0.0397
TYR 185GLY 186 0.0001
GLY 186ILE 187 -0.0271
ILE 187ALA 188 0.0001
ALA 188PHE 189 -0.0092
PHE 189PRO 190 -0.0001
PRO 190LYS 191 -0.0084
LYS 191GLY 192 -0.0000
GLY 192SER 193 0.0180
SER 193ASP 194 0.0000
ASP 194GLU 195 0.0031
GLU 195LEU 196 0.0001
LEU 196ARG 197 -0.0176
ARG 197ASP 198 -0.0000
ASP 198LYS 199 0.0141
LYS 199VAL 200 0.0000
VAL 200ASN 201 -0.0215
ASN 201GLY 202 -0.0001
GLY 202ALA 203 -0.0095
ALA 203LEU 204 0.0003
LEU 204LYS 205 -0.0279
LYS 205THR 206 -0.0002
THR 206LEU 207 0.0178
LEU 207ARG 208 -0.0000
ARG 208GLU 209 -0.0341
GLU 209ASN 210 0.0003
ASN 210GLY 211 0.0440
GLY 211THR 212 0.0001
THR 212TYR 213 -0.0737
TYR 213ASN 214 -0.0000
ASN 214GLU 215 -0.0103
GLU 215ILE 216 0.0002
ILE 216TYR 217 -0.0362
TYR 217LYS 218 -0.0003
LYS 218LYS 219 -0.1127
LYS 219TRP 220 0.0001
TRP 220PHE 221 -0.0459
PHE 221GLY 222 -0.0001
GLY 222THR 223 -0.0033
THR 223GLU 224 0.0003

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.