This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 1
GLN 2
0.0609
GLN 2
ILE 3
0.0120
ILE 3
THR 4
-0.0441
THR 4
LEU 5
-0.0155
LEU 5
TRP 6
0.0418
TRP 6
GLN 7
0.0438
GLN 7
ARG 8
0.0023
ARG 8
PRO 9
-0.0320
PRO 9
LEU 10
-0.0091
LEU 10
VAL 11
0.0114
VAL 11
THR 12
-0.0125
THR 12
ILE 13
0.0036
ILE 13
LYS 14
0.0006
LYS 14
ILE 15
-0.0083
ILE 15
GLY 16
-0.0040
GLY 16
GLY 17
-0.0039
GLY 17
GLN 18
-0.0001
GLN 18
LEU 19
-0.0117
LEU 19
LYS 20
0.0028
LYS 20
GLU 21
-0.0013
GLU 21
ALA 22
0.0000
ALA 22
LEU 23
0.0040
LEU 23
LEU 24
-0.0350
LEU 24
ASP 25
0.0846
ASP 25
THR 26
-0.0990
THR 26
GLY 27
-0.0672
GLY 27
ALA 28
-0.1113
ALA 28
ASP 29
0.0399
ASP 29
ASP 30
-0.0375
ASP 30
THR 31
-0.0059
THR 31
VAL 32
0.0227
VAL 32
LEU 33
0.0005
LEU 33
GLU 34
0.0030
GLU 34
GLU 35
-0.0069
GLU 35
MET 36
0.0049
MET 36
SER 37
-0.0064
SER 37
LEU 38
0.0112
LEU 38
PRO 39
-0.0036
PRO 39
GLY 40
-0.0103
GLY 40
ARG 41
-0.0089
ARG 41
TRP 42
-0.0043
TRP 42
LYS 43
0.0000
LYS 43
PRO 44
-0.0117
PRO 44
LYS 45
0.0005
LYS 45
MET 46
-0.0084
MET 46
ILE 47
0.0115
ILE 47
GLY 48
0.0818
GLY 48
GLY 49
0.0462
GLY 49
ILE 50
0.0690
ILE 50
GLY 51
-0.0296
GLY 51
GLY 52
-0.0111
GLY 52
PHE 53
-0.0564
PHE 53
ILE 54
0.0392
ILE 54
LYS 55
-0.0558
LYS 55
VAL 56
-0.0023
VAL 56
ARG 57
-0.0022
ARG 57
GLN 58
0.0023
GLN 58
TYR 59
0.0031
TYR 59
ASP 60
0.0050
ASP 60
GLN 61
0.0034
GLN 61
ILE 62
-0.0007
ILE 62
LEU 63
-0.0128
LEU 63
ILE 64
-0.0121
ILE 64
GLU 65
-0.0113
GLU 65
ILE 66
0.0023
ILE 66
CYS 67
-0.0083
CYS 67
GLY 68
0.0030
GLY 68
HIS 69
0.0062
HIS 69
LYS 70
-0.0208
LYS 70
ALA 71
-0.0041
ALA 71
ILE 72
0.0029
ILE 72
GLY 73
-0.0163
GLY 73
THR 74
0.0066
THR 74
VAL 75
0.0098
VAL 75
LEU 76
0.0201
LEU 76
VAL 77
-0.0044
VAL 77
GLY 78
0.0081
GLY 78
PRO 79
-0.0009
PRO 79
THR 80
-0.0080
THR 80
PRO 81
-0.0029
PRO 81
VAL 82
0.0026
VAL 82
ASN 83
0.0049
ASN 83
ILE 84
-0.0143
ILE 84
ILE 85
-0.0100
ILE 85
GLY 86
0.0082
GLY 86
ARG 87
-0.0014
ARG 87
ASN 88
-0.0194
ASN 88
LEU 89
-0.0184
LEU 89
LEU 90
0.0565
LEU 90
THR 91
-0.0975
THR 91
GLN 92
0.0604
GLN 92
ILE 93
-0.0275
ILE 93
GLY 94
0.0851
GLY 94
CYS 95
-0.1305
CYS 95
THR 96
-0.0553
THR 96
LEU 97
-0.0407
LEU 97
ASN 98
-0.1146
ASN 98
PHE 99
0.0352
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.