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***  estradiol a701e  ***

CA strain for 2103290409067522

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
VAL 1HIS 2 0.0123
HIS 2HIS 3 -0.0377
HIS 3GLN 4 0.0769
GLN 4LYS 5 -0.1004
LYS 5LEU 6 0.0403
LEU 6VAL 7 -0.0330
VAL 7PHE 8 0.0203
PHE 8PHE 9 0.0056
PHE 9ALA 10 -0.0047
ALA 10GLU 11 0.0247
GLU 11ASP 12 0.0180
ASP 12VAL 13 -0.0219
VAL 13GLY 14 0.0152
GLY 14SER 15 0.0338
SER 15ASN 16 0.0091
ASN 16LYS 17 -0.0026
LYS 17GLY 18 0.0015
GLY 18GLU 19 0.0065
GLU 19ILE 20 0.0179
ILE 20ILE 21 -0.0024
ILE 21GLY 22 0.0192
GLY 22LEU 23 -0.0064
LEU 23MET 24 0.0086
MET 24VAL 25 0.0126
VAL 25GLY 26 0.0177
GLY 26GLY 27 -0.0734
GLY 27VAL 28 0.0030
VAL 28VAL 29 -0.0025
VAL 29ILE 30 -0.0157
ILE 30ALA 31 0.0086
ALA 31THR 32 0.0204
THR 32VAL 33 -0.0275
VAL 33ILE 34 0.0091
ILE 34VAL 35 0.0164
VAL 35ILE 36 -0.0044
ILE 36THR 37 -0.0127
THR 37LEU 38 0.0116
LEU 38VAL 39 0.0006
VAL 39MET 40 -0.0224
MET 40LEU 41 -0.0097
LEU 41LYS 42 0.0124
LYS 42LYS 43 0.0240
LYS 43LYS 44 -0.0136
LYS 44GLN 45 0.0045
GLN 45TYR 46 0.0112

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.