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***  estradiol a701e  ***

CA strain for 2103290409067522

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
VAL 1HIS 2 0.0561
HIS 2HIS 3 -0.0855
HIS 3GLN 4 -0.0469
GLN 4LYS 5 0.0128
LYS 5LEU 6 -0.0458
LEU 6VAL 7 0.0047
VAL 7PHE 8 0.0303
PHE 8PHE 9 -0.0307
PHE 9ALA 10 -0.0156
ALA 10GLU 11 0.0246
GLU 11ASP 12 -0.0476
ASP 12VAL 13 0.0167
VAL 13GLY 14 -0.0028
GLY 14SER 15 -0.0198
SER 15ASN 16 -0.0025
ASN 16LYS 17 -0.0004
LYS 17GLY 18 -0.0017
GLY 18GLU 19 -0.0075
GLU 19ILE 20 0.0069
ILE 20ILE 21 0.0013
ILE 21GLY 22 -0.0143
GLY 22LEU 23 -0.0070
LEU 23MET 24 0.0082
MET 24VAL 25 -0.0057
VAL 25GLY 26 -0.0216
GLY 26GLY 27 -0.0174
GLY 27VAL 28 0.0054
VAL 28VAL 29 0.0072
VAL 29ILE 30 -0.0073
ILE 30ALA 31 0.0191
ALA 31THR 32 0.0269
THR 32VAL 33 0.0008
VAL 33ILE 34 0.0077
ILE 34VAL 35 0.0094
VAL 35ILE 36 0.0008
ILE 36THR 37 0.0125
THR 37LEU 38 0.0007
LEU 38VAL 39 0.0167
VAL 39MET 40 -0.0049
MET 40LEU 41 0.0185
LEU 41LYS 42 -0.0380
LYS 42LYS 43 -0.0106
LYS 43LYS 44 -0.0003
LYS 44GLN 45 0.0178
GLN 45TYR 46 0.0036

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.