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***  estradiol a701e  ***

CA strain for 2103290409067522

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
VAL 1HIS 2 0.0225
HIS 2HIS 3 -0.0444
HIS 3GLN 4 0.0254
GLN 4LYS 5 -0.0667
LYS 5LEU 6 -0.0183
LEU 6VAL 7 -0.0012
VAL 7PHE 8 0.0059
PHE 8PHE 9 -0.0107
PHE 9ALA 10 -0.0018
ALA 10GLU 11 0.0197
GLU 11ASP 12 0.0082
ASP 12VAL 13 -0.0086
VAL 13GLY 14 0.0069
GLY 14SER 15 -0.0016
SER 15ASN 16 -0.0017
ASN 16LYS 17 -0.0008
LYS 17GLY 18 0.0004
GLY 18GLU 19 -0.0011
GLU 19ILE 20 -0.0011
ILE 20ILE 21 -0.0027
ILE 21GLY 22 0.0056
GLY 22LEU 23 0.0058
LEU 23MET 24 -0.0099
MET 24VAL 25 -0.0017
VAL 25GLY 26 0.0064
GLY 26GLY 27 0.0630
GLY 27VAL 28 0.0020
VAL 28VAL 29 0.0019
VAL 29ILE 30 0.0202
ILE 30ALA 31 -0.0111
ALA 31THR 32 -0.0122
THR 32VAL 33 0.0202
VAL 33ILE 34 -0.0157
ILE 34VAL 35 -0.0084
VAL 35ILE 36 0.0061
ILE 36THR 37 0.0043
THR 37LEU 38 -0.0101
LEU 38VAL 39 0.0001
VAL 39MET 40 0.0117
MET 40LEU 41 -0.0007
LEU 41LYS 42 -0.0052
LYS 42LYS 43 -0.0115
LYS 43LYS 44 0.0040
LYS 44GLN 45 -0.0031
GLN 45TYR 46 -0.0063

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.