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***  estradiol a701e  ***

CA strain for 2103290409067522

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
VAL 1HIS 2 -0.0399
HIS 2HIS 3 0.0741
HIS 3GLN 4 0.0732
GLN 4LYS 5 -0.0311
LYS 5LEU 6 0.0150
LEU 6VAL 7 -0.0143
VAL 7PHE 8 -0.0043
PHE 8PHE 9 -0.0063
PHE 9ALA 10 -0.0018
ALA 10GLU 11 0.0154
GLU 11ASP 12 -0.0275
ASP 12VAL 13 -0.0106
VAL 13GLY 14 0.0025
GLY 14SER 15 0.0288
SER 15ASN 16 0.0049
ASN 16LYS 17 0.0066
LYS 17GLY 18 0.0007
GLY 18GLU 19 -0.0159
GLU 19ILE 20 0.0153
ILE 20ILE 21 0.0032
ILE 21GLY 22 -0.0133
GLY 22LEU 23 -0.0345
LEU 23MET 24 0.0234
MET 24VAL 25 -0.0211
VAL 25GLY 26 -0.0295
GLY 26GLY 27 0.0104
GLY 27VAL 28 -0.0166
VAL 28VAL 29 -0.0012
VAL 29ILE 30 -0.0125
ILE 30ALA 31 0.0378
ALA 31THR 32 -0.0151
THR 32VAL 33 0.0033
VAL 33ILE 34 0.0456
ILE 34VAL 35 -0.0158
VAL 35ILE 36 -0.0340
ILE 36THR 37 0.0329
THR 37LEU 38 0.0097
LEU 38VAL 39 -0.0394
VAL 39MET 40 0.0310
MET 40LEU 41 0.0885
LEU 41LYS 42 -0.0054
LYS 42LYS 43 0.0190
LYS 43LYS 44 0.0103
LYS 44GLN 45 0.0028
GLN 45TYR 46 -0.0027

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.