CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1yci  ***

B-factor analysis for ID 210514004643109143

Overall B-factor prediction

Correlation= 0.065 for 336 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   GLY     14      0.1035     61.9622     98.1600
     6 CA   GLU     15      0.1070     62.3382     95.2800
    11 CA   PRO     16      0.0378     54.9133     91.6400
    18 CA   ARG     17      0.0438     55.5575     88.3800
    29 CA   GLU     18      0.1232     64.0745     85.6400
    38 CA   GLU     19      0.1557     67.5711     80.3600
    47 CA   ALA     20      0.4510     99.2513     73.3800
    52 CA   GLY     21      0.6302    118.4867     69.2600
    56 CA   ALA     22      0.3736     90.9439     69.0400
    61 CA   LEU     23      0.3006     83.1154     69.1300
    69 CA   GLY     24      0.1602     68.0530     71.9500
    73 CA   PRO     25      0.0758     58.9908     72.7600
    80 CA   ALA     26      0.0358     54.6962     71.0200
    85 CA   TRP     27      0.0293     54.0001     68.5700
    99 CA   ASP     28      0.0410     55.2599     67.8100
   107 CA   GLU     29      0.0466     55.8605     62.0500
   112 CA   SER     30      0.0464     55.8364     60.3200
   118 CA   GLN     31      0.0240     53.4365     59.4900
   127 CA   LEU     32      0.0155     52.5219     56.8800
   135 CA   ARG     33      0.0164     52.6171     55.9300
   146 CA   SER     34      0.0290     53.9704     56.5600
   152 CA   TYR     35      0.0218     53.2012     54.3300
   164 CA   SER     36      0.0252     53.5679     54.5700
   170 CA   PHE     37      0.0219     53.2107     49.5300
   181 CA   PRO     38      0.0271     53.7634     48.4900
   188 CA   THR     39      0.0206     53.0706     53.6300
   195 CA   ARG     40      0.0294     54.0095     57.1800
   206 CA   PRO     41      0.0220     53.2175     56.9500
   213 CA   ILE     42      0.0128     52.2377     48.1600
   221 CA   PRO     43      0.0152     52.4884     46.3000
   228 CA   ARG     44      0.0141     52.3694     47.4000
   239 CA   LEU     45      0.0158     52.5504     48.4700
   247 CA   SER     46      0.0223     53.2523     48.5700
   253 CA   GLN     47      0.0199     52.9959     52.9000
   262 CA   SER     48      0.0448     55.6659     56.6700
   268 CA   ASP     49      0.0372     54.8533     58.7300
   276 CA   PRO     50      0.0430     55.4737     56.1600
   283 CA   ARG     51      0.0346     54.5697     57.3400
   294 CA   ALA     52      0.0200     53.0036     56.0900
   299 CA   GLU     53      0.0205     53.0608     59.0000
   308 CA   GLU     54      0.0265     53.7018     59.9400
   317 CA   LEU     55      0.0189     52.8885     50.1500
   325 CA   ILE     56      0.0140     52.3642     47.2500
   333 CA   GLU     57      0.0205     53.0569     54.0100
   342 CA   ASN     58      0.0202     53.0235     57.1900
   350 CA   GLU     59      0.0133     52.2913     54.1400
   359 CA   GLU     60      0.0124     52.1878     48.1500
   368 CA   PRO     61      0.0092     51.8441     42.0200
   375 CA   VAL     62      0.0094     51.8704     39.7500
   382 CA   VAL     63      0.0085     51.7759     40.4600
   389 CA   LEU     64      0.0103     51.9606     43.4100
   397 CA   THR     65      0.0135     52.3045     46.6200
   404 CA   ASP     66      0.0198     52.9797     49.8500
   412 CA   THR     67      0.0142     52.3844     46.2800
   419 CA   ASN     68      0.0155     52.5217     47.9700
   427 CA   LEU     69      0.0108     52.0154     44.9300
   435 CA   VAL     70      0.0106     52.0018     42.6800
   442 CA   TYR     71      0.0209     53.1041     43.6300
   454 CA   PRO     72      0.0189     52.8919     44.2800
   461 CA   ALA     73      0.0143     52.3961     47.4200
   466 CA   LEU     74      0.0149     52.4571     48.0300
   474 CA   LYS     75      0.0186     52.8563     51.5300
   483 CA   TRP     76      0.0145     52.4189     52.9600
   497 CA   ASP     77      0.0169     52.6772     60.9400
   505 CA   LEU     78      0.0159     52.5604     64.0700
   513 CA   GLU     79      0.0300     54.0802     67.4600
   522 CA   TYR     80      0.0231     53.3414     65.0000
   534 CA   LEU     81      0.0164     52.6154     67.2800
   542 CA   GLN     82      0.0193     52.9322     72.1000
   551 CA   GLU     83      0.0294     54.0086     75.4900
   560 CA   ASN     84      0.0249     53.5291     74.6600
   568 CA   ILE     85      0.0205     53.0620     75.1000
   576 CA   GLY     86      0.0309     54.1720     78.2100
   580 CA   ASN     87      0.0325     54.3459     79.0800
   588 CA   GLY     88      0.0314     54.2301     76.0700
   592 CA   ASP     89      0.0268     53.7320     75.4500
   600 CA   PHE     90      0.0148     52.4480     70.0500
   611 CA   SER     91      0.0163     52.6035     65.2000
   617 CA   VAL     92      0.0115     52.0902     61.7300
   624 CA   TYR     93      0.0121     52.1569     63.7200
   636 CA   SER     94      0.0141     52.3705     69.2900
   642 CA   ALA     95      0.0157     52.5412     70.7500
   647 CA   SER     96      0.0266     53.7081     72.0000
   653 CA   THR     97      0.0211     53.1264     71.6100
   660 CA   HIS     98      0.0138     52.3387     69.6000
   670 CA   LYS     99      0.0137     52.3270     67.0600
   679 CA   PHE    100      0.0113     52.0730     68.3400
   690 CA   LEU    101      0.0154     52.5074     79.9000
   698 CA   TYR    102      0.0175     52.7364     85.5600
   710 CA   TYR    103      0.0176     52.7461     83.0300
   722 CA   ASP    104      0.0296     54.0306     79.2600
   730 CA   GLU    105      0.0369     54.8212     79.0300
   739 CA   LYS    106      0.0573     57.0079     72.8900
   744 CA   LYS    107      0.0376     54.8979     70.4700
   753 CA   MET    108      0.0404     55.1894     79.1400
   761 CA   ALA    109      0.0670     58.0456     80.8600
   766 CA   ASN    110      0.0500     56.2242     83.2100
   774 CA   PHE    111      0.0460     55.7951     81.5500
   785 CA   GLN    112      0.1018     61.7875     87.1400
   794 CA   ASN    113      0.1304     64.8548     91.4900
   802 CA   PHE    114      0.0543     56.6862     96.2500
   813 CA   LYS    115      0.0675     58.0980     97.4900
   818 CA   PRO    116      0.0338     54.4840    100.5800
   825 CA   ARG    117      0.0333     54.4329    102.3600
   830 CA   SER    118      0.0183     52.8270     99.2100
   836 CA   ASN    119      0.0196     52.9607     94.1300
   841 CA   ARG    120      0.0238     53.4160     91.1600
   852 CA   GLU    121      0.0289     53.9555     88.5700
   861 CA   GLU    122      0.0253     53.5792     81.7700
   870 CA   MET    123      0.0225     53.2785     75.2000
   878 CA   LYS    124      0.0232     53.3502     73.4000
   887 CA   PHE    125      0.0162     52.5990     74.2600
   898 CA   HIS    126      0.0256     53.6022     79.5900
   908 CA   GLU    127      0.0269     53.7406     79.9200
   917 CA   PHE    128      0.0154     52.5094     78.0600
   928 CA   VAL    129      0.0183     52.8267     80.1600
   935 CA   GLU    130      0.0340     54.5094     83.8300
   944 CA   LYS    131      0.0316     54.2520     84.6800
   949 CA   LEU    132      0.0235     53.3816     89.5600
   957 CA   GLN    133      0.0432     55.4964     94.4900
   962 CA   ASP    134      0.0630     57.6224     99.6500
   970 CA   ILE    135      0.0483     56.0413    104.5200
   978 CA   GLN    136      0.0684     58.1987    109.1100
   987 CA   GLN    137      0.1090     62.5544    111.5300
   992 CA   ARG    138      0.1361     65.4619    109.8800
  1003 CA   GLY    139      0.1701     69.1151    108.3100
  1007 CA   GLY    140      0.1048     62.1054    104.2200
  1011 CA   GLU    141      0.0595     57.2419     97.0800
  1020 CA   GLU    142      0.0224     53.2628     87.2200
  1029 CA   ARG    143      0.0135     52.3110     76.0500
  1040 CA   LEU    144      0.0091     51.8396     68.3800
  1048 CA   TYR    145      0.0074     51.6498     62.6700
  1060 CA   LEU    146      0.0075     51.6620     60.3700
  1068 CA   GLN    147      0.0095     51.8738     57.4200
  1077 CA   GLN    148      0.0132     52.2730     57.5300
  1086 CA   THR    149      0.0164     52.6178     61.4000
  1093 CA   LEU    150      0.0194     52.9425     71.4700
  1101 CA   ASN    151      0.0344     54.5536     82.1300
  1109 CA   ASP    152      0.0840     59.8678     86.7900
  1117 CA   THR    153      0.0441     55.5918     86.4900
  1124 CA   VAL    154      0.0325     54.3420     82.7800
  1131 CA   GLY    155      0.0337     54.4774     80.8900
  1135 CA   ARG    156      0.0477     55.9801     80.6100
  1146 CA   LYS    157      0.0364     54.7649     73.8000
  1155 CA   ILE    158      0.0229     53.3194     65.9000
  1163 CA   VAL    159      0.0315     54.2438     65.1600
  1170 CA   MET    160      0.0358     54.6977     66.0900
  1178 CA   ASP    161      0.0225     53.2769     58.8100
  1186 CA   PHE    162      0.0192     52.9158     53.0300
  1197 CA   LEU    163      0.0268     53.7401     49.9100
  1205 CA   GLY    164      0.0221     53.2293     48.9600
  1209 CA   PHE    165      0.0159     52.5601     43.2200
  1220 CA   ASN    166      0.0165     52.6319     43.9500
  1228 CA   TRP    167      0.0185     52.8459     42.2000
  1242 CA   ASN    168      0.0301     54.0923     45.5100
  1250 CA   TRP    169      0.0202     53.0226     47.1500
  1264 CA   ILE    170      0.0138     52.3394     46.9800
  1272 CA   ASN    171      0.0210     53.1132     49.9600
  1280 CA   LYS    172      0.0238     53.4164     54.3600
  1289 CA   GLN    173      0.0161     52.5893     56.8200
  1298 CA   GLN    174      0.0184     52.8299     57.5000
  1307 CA   GLY    175      0.0269     53.7479     56.2100
  1311 CA   LYS    176      0.0263     53.6771     58.7600
  1320 CA   ARG    177      0.0232     53.3533     58.1100
  1331 CA   GLY    178      0.0313     54.2132     54.9500
  1335 CA   TRP    179      0.0229     53.3206     53.7500
  1349 CA   GLY    180      0.0310     54.1843     56.9500
  1353 CA   GLN    181      0.0383     54.9645     61.5600
  1362 CA   LEU    182      0.0187     52.8632     56.9100
  1370 CA   THR    183      0.0218     53.2018     56.9100
  1377 CA   SER    184      0.0135     52.3083     53.0000
  1383 CA   ASN    185      0.0107     52.0085     51.1100
  1391 CA   LEU    186      0.0088     51.8053     50.5300
  1399 CA   LEU    187      0.0067     51.5832     47.3300
  1407 CA   LEU    188      0.0060     51.5002     45.1900
  1415 CA   ILE    189      0.0057     51.4681     46.6500
  1423 CA   GLY    190      0.0071     51.6171     51.1800
  1427 CA   MET    191      0.0080     51.7210     54.6500
  1435 CA   GLU    192      0.0113     52.0741     57.9400
  1444 CA   GLY    193      0.0119     52.1365     55.3900
  1448 CA   ASN    194      0.0084     51.7555     54.2400
  1456 CA   VAL    195      0.0094     51.8657     49.5200
  1463 CA   THR    196      0.0083     51.7470     43.7200
  1470 CA   PRO    197      0.0092     51.8493     42.0100
  1477 CA   ALA    198      0.0088     51.7982     38.3700
  1482 CA   HIS    199      0.0089     51.8147     37.7300
  1492 CA   TYR    200      0.0092     51.8432     37.3900
  1504 CA   ASP    201      0.0096     51.8848     42.0100
  1512 CA   GLU    202      0.0115     52.0943     47.3000
  1521 CA   GLN    203      0.0108     52.0225     42.8800
  1530 CA   GLN    204      0.0089     51.8185     36.8500
  1539 CA   ASN    205      0.0070     51.6135     36.1700
  1547 CA   PHE    206      0.0052     51.4138     36.5000
  1558 CA   PHE    207      0.0045     51.3413     36.4600
  1569 CA   ALA    208      0.0054     51.4340     36.9000
  1574 CA   GLN    209      0.0052     51.4168     38.5200
  1583 CA   ILE    210      0.0074     51.6571     43.0500
  1591 CA   LYS    211      0.0078     51.6933     45.7100
  1600 CA   GLY    212      0.0091     51.8305     47.1300
  1604 CA   TYR    213      0.0077     51.6895     47.3700
  1616 CA   LYS    214      0.0058     51.4838     43.1600
  1625 CA   ARG    215      0.0067     51.5752     43.7100
  1636 CA   CYS    216      0.0066     51.5694     39.8700
  1642 CA   ILE    217      0.0079     51.7097     39.3100
  1650 CA   LEU    218      0.0084     51.7581     37.4400
  1658 CA   PHE    219      0.0101     51.9470     38.1200
  1669 CA   PRO    220      0.0124     52.1854     38.3000
  1676 CA   PRO    221      0.0133     52.2856     43.6200
  1683 CA   ASP    222      0.0204     53.0501     47.3300
  1691 CA   GLN    223      0.0171     52.6962     46.5200
  1700 CA   PHE    224      0.0172     52.7065     42.0500
  1711 CA   GLU    225      0.0272     53.7786     42.8900
  1720 CA   CYS    226      0.0196     52.9633     41.7600
  1726 CA   LEU    227      0.0149     52.4618     41.9400
  1734 CA   TYR    228      0.0172     52.7010     38.5800
  1746 CA   PRO    229      0.0147     52.4403     39.1500
  1753 CA   TYR    230      0.0152     52.4918     39.1800
  1765 CA   PRO    231      0.0181     52.8056     39.9000
  1772 CA   VAL    232      0.0211     53.1187     40.7000
  1779 CA   HIS    233      0.0242     53.4603     43.8400
  1789 CA   HIS    234      0.0205     53.0561     45.6200
  1799 CA   PRO    235      0.0204     53.0447     46.9300
  1806 CA   CYS    236      0.0151     52.4762     45.7200
  1812 CA   ASP    237      0.0155     52.5174     47.9900
  1820 CA   ARG    238      0.0115     52.0944     45.1500
  1831 CA   GLN    239      0.0117     52.1148     46.7100
  1840 CA   SER    240      0.0137     52.3244     41.4300
  1846 CA   GLN    241      0.0175     52.7406     42.8900
  1855 CA   VAL    242      0.0200     53.0103     46.7200
  1862 CA   ASP    243      0.0237     53.4058     49.1900
  1870 CA   PHE    244      0.0166     52.6416     49.8500
  1881 CA   ASP    245      0.0225     53.2748     56.2000
  1889 CA   ASN    246      0.0559     56.8561     58.6600
  1897 CA   PRO    247      0.0320     54.2880     52.1400
  1904 CA   ASP    248      0.0493     56.1450     51.8400
  1912 CA   TYR    249      0.0471     55.9082     52.4900
  1924 CA   GLU    250      0.0865     60.1414     57.2000
  1933 CA   ARG    251      0.0710     58.4803     50.7300
  1944 CA   PHE    252      0.0344     54.5478     45.9600
  1955 CA   PRO    253      0.0435     55.5252     43.2600
  1962 CA   ASN    254      0.0322     54.3161     42.8900
  1970 CA   PHE    255      0.0237     53.4028     41.6900
  1981 CA   GLN    256      0.0361     54.7371     42.3600
  1990 CA   ASN    257      0.0353     54.6420     42.5900
  1998 CA   VAL    258      0.0203     53.0353     46.9000
  2005 CA   VAL    259      0.0193     52.9282     50.8000
  2012 CA   GLY    260      0.0133     52.2913     52.8900
  2016 CA   TYR    261      0.0117     52.1110     52.3200
  2028 CA   GLU    262      0.0103     51.9607     49.5500
  2037 CA   THR    263      0.0093     51.8621     48.6300
  2044 CA   VAL    264      0.0078     51.6985     45.7600
  2051 CA   VAL    265      0.0068     51.5857     45.0700
  2058 CA   GLY    266      0.0081     51.7261     44.1700
  2062 CA   PRO    267      0.0079     51.7109     41.2300
  2069 CA   GLY    268      0.0086     51.7841     41.9800
  2073 CA   ASP    269      0.0075     51.6674     41.8700
  2081 CA   VAL    270      0.0057     51.4688     37.9200
  2088 CA   LEU    271      0.0054     51.4371     34.6700
  2096 CA   TYR    272      0.0061     51.5144     33.3900
  2108 CA   ILE    273      0.0068     51.5937     33.5800
  2116 CA   PRO    274      0.0086     51.7825     36.6700
  2123 CA   MET    275      0.0100     51.9314     41.9300
  2131 CA   TYR    276      0.0103     51.9608     43.2800
  2143 CA   TRP    277      0.0094     51.8653     40.4400
  2157 CA   TRP    278      0.0084     51.7609     39.9300
  2171 CA   HIS    279      0.0078     51.7009     41.3300
  2181 CA   HIS    280      0.0076     51.6766     43.2700
  2191 CA   ILE    281      0.0064     51.5509     45.3200
  2199 CA   GLU    282      0.0078     51.6950     51.5000
  2208 CA   SER    283      0.0073     51.6441     54.4200
  2214 CA   LEU    284      0.0108     52.0192     56.1300
  2222 CA   LEU    285      0.0163     52.6042     57.7900
  2230 CA   ASN    286      0.0359     54.7158     62.2200
  2238 CA   GLY    287      0.0210     53.1074     58.8400
  2242 CA   GLY    288      0.0134     52.2917     55.1200
  2246 CA   ILE    289      0.0092     51.8444     50.5500
  2254 CA   THR    290      0.0063     51.5358     48.0300
  2261 CA   ILE    291      0.0059     51.4917     43.9800
  2269 CA   THR    292      0.0050     51.3962     42.8300
  2276 CA   VAL    293      0.0053     51.4289     43.2200
  2283 CA   ASN    294      0.0067     51.5759     47.9100
  2291 CA   PHE    295      0.0075     51.6606     48.2000
  2302 CA   TRP    296      0.0100     51.9297     50.9200
  2316 CA   TYR    297      0.0126     52.2139     52.2000
  2328 CA   LYS    298      0.0226     53.2890     60.1100
  2337 CA   GLY    299      0.0245     53.4833     64.6000
  2341 CA   ALA    300      0.0500     56.2246     71.2500
  2346 CA   PRO    301      0.1396     65.8375     78.0700
  2353 CA   THR    302      0.2636     79.1401     85.7200
  2360 CA   PRO    303      0.3932     93.0463     88.4600
  2367 CA   LYS    304      0.8336    140.3050     91.0900
  2371 CA   ARG    305      0.7396    130.2233     88.3200
  2376 CA   ILE    306      0.3446     87.8352     81.9700
  2381 CA   GLU    307      0.3476     88.1599     76.7500
  2390 CA   TYR    308      0.2803     80.9376     68.9900
  2402 CA   PRO    309      0.2815     81.0678     62.7800
  2409 CA   LEU    310      0.1021     61.8156     52.6300
  2417 CA   LYS    311      0.0849     59.9721     47.6300
  2422 CA   ALA    312      0.0361     54.7337     49.5200
  2427 CA   HIS    313      0.0233     53.3639     49.4200
  2437 CA   GLN    314      0.0347     54.5857     44.7000
  2446 CA   LYS    315      0.0392     55.0679     40.8100
  2455 CA   VAL    316      0.0220     53.2176     37.6000
  2462 CA   ALA    317      0.0252     53.5624     38.3700
  2467 CA   ILE    318      0.0386     55.0015     39.1800
  2475 CA   MET    319      0.0314     54.2235     38.6700
  2483 CA   ARG    320      0.0221     53.2322     41.5800
  2494 CA   ASN    321      0.0368     54.8081     46.1200
  2502 CA   ILE    322      0.0398     55.1307     43.1500
  2510 CA   GLU    323      0.0274     53.7969     43.1100
  2519 CA   LYS    324      0.0401     55.1589     46.3600
  2528 CA   MET    325      0.0660     57.9441     52.3300
  2536 CA   LEU    326      0.0590     57.1948     49.7400
  2544 CA   GLY    327      0.0549     56.7511     48.3000
  2548 CA   GLU    328      0.1192     63.6508     51.6300
  2557 CA   ALA    329      0.1551     67.5075     47.0500
  2562 CA   LEU    330      0.1262     64.4041     46.5600
  2570 CA   GLY    331      0.1574     67.7537     52.8700
  2574 CA   ASN    332      0.0938     60.9210     56.6700
  2582 CA   PRO    333      0.0502     56.2418     53.7800
  2589 CA   GLN    334      0.0691     58.2706     56.6600
  2598 CA   GLU    335      0.0874     60.2420     53.0900
  2607 CA   VAL    336      0.0574     57.0226     46.5100
  2614 CA   GLY    337      0.1163     63.3339     43.1200
  2618 CA   PRO    338      0.1864     70.8567     41.3500
  2625 CA   LEU    339      0.1559     67.5832     41.9500
  2633 CA   LEU    340      0.1596     67.9797     37.4800
  2641 CA   ASN    341      0.2978     82.8109     40.4600
  2649 CA   THR    342      0.3682     90.3677     40.0200
  2656 CA   MET    343      0.3751     91.1116     38.9100
  2664 CA   ILE    344      0.5401    108.8137     39.8300
  2672 CA   LYS    345      0.7502    131.3596     39.9700
  2681 CA   GLY    346      1.2421    184.1472     42.1100
  2685 CA   ARG    347      1.1104    170.0158     40.1300
  2696 CA   TYR    348      1.0837    167.1467     41.7200
  2708 CA   ASN    349      1.3556    196.3185     48.7200

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.