CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1QT4closedvsopen  ***

Normal Mode Analysis for ID 210501120921126283

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6245
mode 8 1.18 0.5328
mode 9 1.51 0.6915
mode 10 2.11 0.5611
mode 11 2.20 0.5942
mode 12 2.46 0.6147
mode 13 2.71 0.2595
mode 14 2.74 0.1681
mode 15 2.88 0.2490
mode 16 3.13 0.3580
mode 17 3.23 0.4431
mode 18 3.29 0.4070
mode 19 3.39 0.3139
mode 20 3.49 0.4080
mode 21 3.63 0.3867
mode 22 3.69 0.3115
mode 23 3.85 0.2883
mode 24 3.91 0.3639
mode 25 4.00 0.2907
mode 26 4.10 0.5231
mode 27 4.15 0.4665
mode 28 4.36 0.2963
mode 29 4.39 0.4182
mode 30 4.52 0.4333
mode 31 4.56 0.3009
mode 32 4.59 0.2136
mode 33 4.65 0.3652
mode 34 4.67 0.3188
mode 35 4.73 0.3434
mode 36 4.77 0.3980
mode 37 4.82 0.5286
mode 38 4.88 0.5379
mode 39 4.92 0.4276
mode 40 4.97 0.4109
mode 41 5.02 0.3422
mode 42 5.03 0.4164
mode 43 5.09 0.3653
mode 44 5.13 0.5259
mode 45 5.17 0.4660
mode 46 5.28 0.2937
mode 47 5.32 0.4910
mode 48 5.41 0.3970
mode 49 5.46 0.3046
mode 50 5.52 0.4085
mode 51 5.56 0.3894
mode 52 5.57 0.3203
mode 53 5.64 0.1507
mode 54 5.69 0.1835
mode 55 5.75 0.2228
mode 56 5.79 0.5449
mode 57 5.89 0.3094
mode 58 5.91 0.3881
mode 59 5.92 0.2326
mode 60 5.97 0.4251
mode 61 6.03 0.3476
mode 62 6.05 0.4399
mode 63 6.12 0.4147
mode 64 6.15 0.3093
mode 65 6.17 0.4101
mode 66 6.21 0.4774
mode 67 6.22 0.3825
mode 68 6.26 0.3091
mode 69 6.32 0.3505
mode 70 6.34 0.2378
mode 71 6.38 0.4550
mode 72 6.42 0.3517
mode 73 6.45 0.3889
mode 74 6.47 0.3732
mode 75 6.48 0.2886
mode 76 6.51 0.2537
mode 77 6.54 0.3855
mode 78 6.55 0.3962
mode 79 6.60 0.3083
mode 80 6.65 0.2866
mode 81 6.65 0.3269
mode 82 6.69 0.2671
mode 83 6.75 0.3818
mode 84 6.77 0.3746
mode 85 6.80 0.3337
mode 86 6.83 0.3744
mode 87 6.87 0.3767
mode 88 6.91 0.3413
mode 89 6.94 0.3501
mode 90 6.97 0.4124
mode 91 6.98 0.2978
mode 92 7.01 0.4128
mode 93 7.03 0.4417
mode 94 7.05 0.4712
mode 95 7.09 0.3132
mode 96 7.14 0.2520
mode 97 7.16 0.3836
mode 98 7.20 0.4187
mode 99 7.23 0.4113
mode 100 7.24 0.3388
mode 101 7.28 0.4906
mode 102 7.30 0.2207
mode 103 7.32 0.2970
mode 104 7.34 0.3862
mode 105 7.35 0.1973
mode 106 7.38 0.4059

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.