CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  6DG7 CHOLESTEROL BOX 3  ***

Normal Mode Analysis for ID 21032916130086327

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4731
mode 8 1.16 0.4812
mode 9 1.16 0.4792
mode 10 1.77 0.4821
mode 11 1.78 0.4879
mode 12 1.83 0.1146
mode 13 1.87 0.0413
mode 14 1.88 0.0491
mode 15 1.93 0.0729
mode 16 1.93 0.0590
mode 17 2.01 0.4153
mode 18 2.02 0.4225
mode 19 2.06 0.1277
mode 20 2.08 0.5171
mode 21 2.08 0.1387
mode 22 2.20 0.1727
mode 23 2.21 0.1652
mode 24 2.50 0.1132
mode 25 2.51 0.3760
mode 26 2.53 0.3389
mode 27 2.54 0.6192
mode 28 2.55 0.6078
mode 29 2.84 0.4850
mode 30 3.02 0.1987
mode 31 3.05 0.2108
mode 32 3.15 0.6107
mode 33 3.16 0.6153
mode 34 3.16 0.6006
mode 35 3.22 0.4696
mode 36 3.25 0.4805
mode 37 3.31 0.6691
mode 38 3.39 0.6890
mode 39 3.40 0.6904
mode 40 3.49 0.5993
mode 41 3.66 0.4108
mode 42 3.71 0.6129
mode 43 3.71 0.5935
mode 44 3.74 0.4628
mode 45 3.76 0.4687
mode 46 3.78 0.5912
mode 47 3.79 0.5917
mode 48 3.90 0.7856
mode 49 3.93 0.1001
mode 50 3.96 0.2424
mode 51 4.00 0.3194
mode 52 4.03 0.2434
mode 53 4.03 0.1465
mode 54 4.05 0.2593
mode 55 4.08 0.4279
mode 56 4.13 0.3968
mode 57 4.13 0.3902
mode 58 4.15 0.2791
mode 59 4.16 0.2878
mode 60 4.20 0.6448
mode 61 4.21 0.2513
mode 62 4.25 0.1833
mode 63 4.40 0.4240
mode 64 4.41 0.4439
mode 65 4.42 0.2597
mode 66 4.42 0.3786
mode 67 4.43 0.4833
mode 68 4.45 0.3357
mode 69 4.52 0.4261
mode 70 4.65 0.5118
mode 71 4.66 0.5113
mode 72 4.71 0.6760
mode 73 4.72 0.6620
mode 74 4.74 0.2421
mode 75 4.79 0.5294
mode 76 4.79 0.5232
mode 77 4.93 0.3606
mode 78 4.94 0.5229
mode 79 4.96 0.5007
mode 80 5.01 0.3650
mode 81 5.02 0.3676
mode 82 5.10 0.5796
mode 83 5.11 0.5825
mode 84 5.21 0.5978
mode 85 5.25 0.4222
mode 86 5.26 0.4219
mode 87 5.28 0.5698
mode 88 5.29 0.5492
mode 89 5.50 0.3600
mode 90 5.51 0.3503
mode 91 5.52 0.3299
mode 92 5.55 0.4831
mode 93 5.56 0.5151
mode 94 5.56 0.4792
mode 95 5.56 0.4798
mode 96 5.59 0.3855
mode 97 5.61 0.3199
mode 98 5.69 0.1230
mode 99 5.75 0.3425
mode 100 5.76 0.4252
mode 101 5.77 0.4099
mode 102 5.79 0.2988
mode 103 5.80 0.3215
mode 104 5.84 0.4329
mode 105 5.85 0.4142
mode 106 5.91 0.4525

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.