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Normal Mode Analysis for ID 210302033615115124

conformational change will be analysed

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: Rotation-translation modes have a cumulative overlap of 0.1030 !!! This probably means that the second conformation was not fitted properly onto the first one.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.3738 0.001 13.7089
mode 8 1.16 0.4850 0.005 -23.7035
mode 9 1.48 0.5949 0.009 -24.5731
mode 10 1.56 0.4419 0.010 -15.5497
mode 11 1.59 0.4558 0.022 -41.1929
mode 12 1.88 0.2331 0.022 -2.7694
mode 13 2.09 0.3758 0.024 -13.8733
mode 14 2.13 0.3292 0.031 -33.0749
mode 15 2.28 0.3421 0.034 -21.7756
mode 16 2.42 0.5960 0.083 -83.1185
mode 17 2.65 0.3103 0.126 79.5018
mode 18 2.75 0.5270 0.126 -0.5703
mode 19 2.90 0.6818 0.149 57.6823
mode 20 3.02 0.5272 0.154 -25.7096
mode 21 3.07 0.5483 0.156 -19.2732
mode 22 3.19 0.3237 0.178 -56.9884
mode 23 3.21 0.5077 0.180 -17.8745
mode 24 3.32 0.3095 0.183 -20.9369
mode 25 3.38 0.1509 0.229 81.4127
mode 26 3.42 0.4643 0.238 37.4320
mode 27 3.56 0.2960 0.329 -114.2098
mode 28 3.63 0.3471 0.354 -61.2288
mode 29 3.68 0.4717 0.375 53.9606
mode 30 3.72 0.5334 0.424 -84.2734
mode 31 3.77 0.1748 0.424 -2.3437
mode 32 3.85 0.4820 0.437 43.1886
mode 33 3.91 0.4048 0.438 12.8221
mode 34 4.02 0.4420 0.438 -0.9458
mode 35 4.13 0.5636 0.458 54.6775
mode 36 4.15 0.2310 0.484 60.3472
mode 37 4.17 0.3533 0.484 2.7813
mode 38 4.24 0.4735 0.497 -44.4977
mode 39 4.29 0.1889 0.506 -37.9843
mode 40 4.31 0.2728 0.506 -3.0434
mode 41 4.37 0.4708 0.508 13.3691
mode 42 4.47 0.4512 0.512 -23.2605
mode 43 4.48 0.2510 0.513 12.8479
mode 44 4.53 0.3823 0.516 -19.4281
mode 45 4.61 0.4085 0.517 15.4894
mode 46 4.62 0.4476 0.518 -7.7848
mode 47 4.66 0.5043 0.518 9.8751
mode 48 4.67 0.4971 0.556 73.8342
mode 49 4.74 0.1442 0.557 -8.1048
mode 50 4.75 0.2201 0.563 -29.3565
mode 51 4.76 0.3615 0.572 -36.9590
mode 52 4.85 0.3129 0.572 3.0180
mode 53 4.88 0.2007 0.572 -2.4642
mode 54 4.94 0.4847 0.572 -1.2748
mode 55 4.99 0.4420 0.584 -42.0579
mode 56 5.01 0.4985 0.595 39.8186
mode 57 5.05 0.4068 0.598 -20.1522
mode 58 5.10 0.5159 0.604 -28.5267
mode 59 5.15 0.5581 0.641 -73.0545
mode 60 5.18 0.3600 0.643 17.2912
mode 61 5.20 0.3459 0.645 -18.4126
mode 62 5.25 0.1302 0.646 14.8217
mode 63 5.26 0.2942 0.646 1.0675
mode 64 5.29 0.3703 0.647 -11.7087
mode 65 5.33 0.1680 0.647 -6.9078
mode 66 5.38 0.4618 0.649 -14.9957
mode 67 5.39 0.4172 0.655 30.4285
mode 68 5.44 0.4857 0.655 -1.9478
mode 69 5.51 0.5506 0.655 -4.7904
mode 70 5.52 0.4621 0.658 -19.4517
mode 71 5.53 0.4765 0.662 25.9001
mode 72 5.55 0.3906 0.663 11.9455
mode 73 5.60 0.3588 0.677 44.6022
mode 74 5.62 0.1292 0.685 -33.5644
mode 75 5.63 0.3208 0.686 11.2114
mode 76 5.66 0.0765 0.688 -15.4154
mode 77 5.67 0.4320 0.699 41.1684
mode 78 5.72 0.4691 0.709 38.3009
mode 79 5.76 0.5115 0.729 -52.8481
mode 80 5.77 0.2780 0.729 -7.7679
mode 81 5.82 0.5386 0.739 -36.8727
mode 82 5.82 0.1289 0.743 22.9215
mode 83 5.86 0.2963 0.749 33.1906
mode 84 5.88 0.4146 0.753 20.2051
mode 85 5.92 0.5035 0.776 57.2920
mode 86 5.95 0.4284 0.778 -19.5356
mode 87 5.96 0.4248 0.778 -5.8843
mode 88 6.00 0.3309 0.778 4.9172
mode 89 6.03 0.4199 0.778 -6.8697
mode 90 6.05 0.2751 0.779 -12.4435
mode 91 6.07 0.5832 0.781 17.6015
mode 92 6.13 0.2954 0.783 11.0662
mode 93 6.14 0.4525 0.783 6.6327
mode 94 6.16 0.4379 0.784 13.7053
mode 95 6.19 0.3843 0.785 -10.2369
mode 96 6.21 0.3816 0.785 5.6924
mode 97 6.25 0.3353 0.785 2.3369
mode 98 6.26 0.1921 0.786 10.3538
mode 99 6.31 0.3156 0.787 16.1291
mode 100 6.32 0.4435 0.793 27.0159
mode 101 6.33 0.2646 0.794 -13.4066
mode 102 6.35 0.2842 0.795 -10.1247
mode 103 6.37 0.2742 0.806 40.4493
mode 104 6.39 0.4547 0.807 -6.1146
mode 105 6.43 0.4383 0.807 10.9190
mode 106 6.46 0.4788 0.809 18.9236

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.