CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  myosin1  ***

Normal Mode Analysis for ID 21020520081625944

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6820
mode 8 1.11 0.6726
mode 9 2.50 0.7103
mode 10 3.21 0.5319
mode 11 3.42 0.7061
mode 12 5.74 0.7831
mode 13 5.76 0.6686
mode 14 6.47 0.5923
mode 15 7.99 0.7678
mode 16 8.46 0.5285
mode 17 9.35 0.7229
mode 18 9.62 0.5685
mode 19 11.10 0.3478
mode 20 12.17 0.4522
mode 21 13.01 0.3797
mode 22 13.54 0.6960
mode 23 14.40 0.2494
mode 24 15.71 0.7459
mode 25 15.86 0.6246
mode 26 16.51 0.2772
mode 27 17.42 0.7039
mode 28 18.99 0.5001
mode 29 19.62 0.7062
mode 30 20.75 0.6380
mode 31 21.30 0.3847
mode 32 22.25 0.3669
mode 33 22.91 0.3172
mode 34 23.26 0.6878
mode 35 24.11 0.6487
mode 36 25.56 0.6617
mode 37 26.34 0.5840
mode 38 27.21 0.4509
mode 39 28.51 0.5506
mode 40 29.37 0.5259
mode 41 29.83 0.6127
mode 42 30.93 0.5633
mode 43 31.06 0.3313
mode 44 31.80 0.1208
mode 45 32.63 0.4459
mode 46 32.83 0.6184
mode 47 34.16 0.4654
mode 48 34.81 0.1274
mode 49 35.01 0.1914
mode 50 35.69 0.2523
mode 51 36.00 0.6072
mode 52 37.12 0.6768
mode 53 38.67 0.7322
mode 54 38.97 0.5167
mode 55 39.75 0.4640
mode 56 39.91 0.4432
mode 57 40.51 0.3525
mode 58 41.08 0.5342
mode 59 41.82 0.2842
mode 60 42.74 0.4444
mode 61 43.11 0.2895
mode 62 43.65 0.1955
mode 63 44.15 0.6241
mode 64 44.86 0.4882
mode 65 45.16 0.6024
mode 66 45.43 0.4998
mode 67 45.67 0.5792
mode 68 45.85 0.3607
mode 69 46.43 0.3138
mode 70 46.49 0.2946
mode 71 47.27 0.5174
mode 72 47.58 0.5502
mode 73 48.34 0.5724
mode 74 49.03 0.4887
mode 75 49.52 0.5495
mode 76 50.36 0.4317
mode 77 50.55 0.5174
mode 78 50.97 0.4981
mode 79 51.35 0.5424
mode 80 51.56 0.2371
mode 81 52.14 0.4100
mode 82 52.39 0.4080
mode 83 52.72 0.4384
mode 84 53.24 0.3304
mode 85 53.71 0.6045
mode 86 54.40 0.4940
mode 87 54.76 0.3714
mode 88 55.07 0.4615
mode 89 55.58 0.4176
mode 90 55.91 0.4766
mode 91 56.05 0.3036
mode 92 56.19 0.5713
mode 93 56.66 0.4272
mode 94 57.28 0.5346
mode 95 57.67 0.5237
mode 96 57.99 0.2987
mode 97 58.63 0.2347
mode 98 58.67 0.2420
mode 99 59.43 0.5191
mode 100 59.66 0.4900
mode 101 59.77 0.4128
mode 102 60.05 0.3652
mode 103 60.19 0.4750
mode 104 60.62 0.0249
mode 105 60.67 0.4913
mode 106 61.01 0.4656

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.