CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  TRANSPORT PROTEIN 02-MAY-09 3HAP  ***

CA distance fluctuations for 21111011205899072

---  normal mode 10  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
GLN 75 0.19 GLY 6 -0.19 GLN 105
GLN 75 0.24 ARG 7 -0.18 GLN 105
GLN 75 0.24 ARG 7 -0.18 GLN 105
GLN 75 0.30 PRO 8 -0.15 GLN 105
GLN 75 0.25 GLU 9 -0.17 GLN 105
GLN 75 0.19 TRP 10 -0.20 GLN 105
GLU 74 0.21 ILE 11 -0.20 GLN 105
GLU 74 0.21 TRP 12 -0.19 GLN 105
GLU 74 0.15 LEU 13 -0.23 GLN 105
GLU 74 0.15 ALA 14 -0.25 GLN 105
LEU 22 0.25 LEU 15 -0.24 GLN 105
LEU 22 0.25 LEU 15 -0.24 GLN 105
GLY 23 0.17 GLY 16 -0.26 GLN 105
LYS 40 0.16 THR 17 -0.31 GLN 105
LYS 40 0.16 THR 17 -0.31 GLN 105
LEU 25 0.22 ALA 18 -0.30 GLN 105
LEU 22 0.33 LEU 19 -0.31 GLN 105
LYS 40 0.16 MET 20 -0.36 GLN 105
LYS 40 0.18 GLY 21 -0.40 GLN 105
LEU 19 0.33 LEU 22 -0.40 GLN 105
VAL 213 0.31 GLY 23 -0.42 GLN 105
LYS 40 0.19 THR 24 -0.52 GLN 105
LEU 19 0.27 LEU 25 -0.53 GLN 105
LEU 19 0.27 LEU 25 -0.53 GLN 105
GLY 218 0.29 TYR 26 -0.50 GLN 105
GLY 218 0.24 PHE 27 -0.59 GLN 105
GLY 31 0.32 LEU 28 -0.70 GLN 105
GLY 31 0.31 LEU 28 -0.70 GLN 105
ILE 222 0.28 VAL 29 -0.64 GLN 105
ILE 222 0.38 LYS 30 -0.58 GLN 105
LEU 28 0.32 GLY 31 -0.75 GLN 105
VAL 34 0.20 MET 32 -0.97 GLN 105
VAL 34 0.20 MET 32 -0.97 GLN 105
ARG 225 0.52 GLY 33 -0.68 GLN 105
SER 226 0.27 VAL 34 -0.64 GLN 105
SER 226 0.27 VAL 34 -0.64 GLN 105
LEU 28 0.24 SER 35 -0.67 GLN 105
LEU 28 0.24 SER 35 -0.67 GLN 105
LEU 28 0.17 ASP 36 -0.63 GLN 105
ALA 44 0.20 PRO 37 -0.78 GLN 105
ALA 44 0.18 ASP 38 -0.83 ASP 102
ARG 227 0.20 ALA 39 -0.65 GLN 105
THR 47 0.28 LYS 40 -0.83 GLN 105
ALA 44 0.32 LYS 41 -0.99 GLN 105
ALA 44 0.32 LYS 41 -0.99 GLN 105
ALA 44 0.17 PHE 42 -0.75 GLN 105
LYS 40 0.26 TYR 43 -0.74 GLN 105
LYS 41 0.32 ALA 44 -0.86 MET 32
LYS 41 0.16 ILE 45 -0.83 GLN 105
ALA 44 0.22 THR 46 -0.65 GLN 105
LYS 40 0.28 THR 47 -0.67 GLN 105
LYS 40 0.22 LEU 48 -0.68 GLN 105
LYS 40 0.22 LEU 48 -0.68 GLN 105
LYS 40 0.16 VAL 49 -0.54 GLN 105
LYS 40 0.18 PRO 50 -0.46 GLN 105
LYS 40 0.21 ALA 51 -0.52 GLN 105
PRO 37 0.17 ILE 52 -0.47 GLN 105
LYS 40 0.14 ALA 53 -0.38 GLN 105
LYS 40 0.17 PHE 54 -0.38 GLN 105
PRO 37 0.17 THR 55 -0.40 GLN 105
PRO 37 0.17 THR 55 -0.40 GLN 105
MET 56 0.14 MET 56 -0.34 GLN 105
MET 56 0.14 MET 56 -0.34 GLN 105
LYS 40 0.13 TYR 57 -0.30 GLN 105
PRO 37 0.14 LEU 58 -0.32 GLN 105
PRO 37 0.12 SER 59 -0.31 GLN 105
PRO 37 0.12 SER 59 -0.31 GLN 105
PRO 37 0.10 MET 60 -0.26 GLN 105
PRO 37 0.12 LEU 61 -0.26 GLN 105
PRO 37 0.12 LEU 62 -0.27 GLN 105
PRO 37 0.10 GLY 63 -0.25 GLN 105
VAL 124 0.09 TYR 64 -0.27 GLN 105
VAL 124 0.11 GLY 65 -0.27 GLN 105
THR 128 0.12 LEU 66 -0.23 GLN 105
THR 128 0.16 THR 67 -0.22 GLN 105
PRO 8 0.18 MET 68 -0.22 THR 67
PRO 200 0.17 VAL 69 -0.21 GLY 116
PRO 200 0.22 PRO 70 -0.23 LEU 127
PRO 200 0.22 PHE 71 -0.18 GLY 120
GLY 197 0.34 GLY 72 -0.16 VAL 130
PRO 200 0.39 GLY 73 -0.26 LYS 129
PRO 200 0.44 GLU 74 -0.13 LYS 129
PRO 200 0.37 GLN 75 -0.15 GLY 116
PRO 200 0.27 ASN 76 -0.12 GLN 105
ASN 202 0.18 PRO 77 -0.15 GLN 105
THR 128 0.12 ILE 78 -0.17 GLN 105
VAL 124 0.08 TYR 79 -0.21 GLN 105
VAL 124 0.11 TRP 80 -0.23 GLN 105
VAL 124 0.08 ALA 81 -0.28 GLN 105
LYS 40 0.07 ARG 82 -0.24 GLN 105
GLY 120 0.05 TYR 83 -0.25 GLN 105
PRO 37 0.07 ALA 84 -0.32 GLN 105
PRO 37 0.08 ASP 85 -0.35 GLN 105
LYS 40 0.06 TRP 86 -0.29 GLN 105
GLY 231 0.04 LEU 87 -0.32 MET 32
GLY 231 0.04 LEU 87 -0.32 GLN 105
GLY 231 0.07 PHE 88 -0.46 GLN 105
LYS 41 0.09 THR 89 -0.42 GLN 105
GLY 116 0.04 THR 90 -0.29 MET 32
ARG 164 0.06 PRO 91 -0.40 MET 32
GLY 231 0.08 LEU 92 -0.57 GLN 105
ARG 164 0.05 LEU 93 -0.39 GLN 105
ARG 164 0.08 LEU 94 -0.36 MET 32
ARG 164 0.11 LEU 95 -0.57 GLN 105
ARG 164 0.11 LEU 95 -0.57 GLN 105
ARG 164 0.09 ASP 96 -0.51 GLN 105
ARG 164 0.09 LEU 97 -0.31 MET 32
ASP 102 0.13 ALA 98 -0.41 MET 32
ARG 164 0.18 LEU 99 -0.49 LYS 41
ARG 164 0.17 LEU 100 -0.54 ASP 38
ARG 164 0.17 LEU 100 -0.54 ASP 38
ARG 164 0.19 VAL 101 -0.60 ASP 38
ARG 164 0.23 ASP 102 -0.83 ASP 38
ARG 164 0.22 ASP 102 -0.83 ASP 38
ILE 108 0.24 ALA 103 -0.61 ASP 38
SER 162 0.24 ASP 104 -0.79 LYS 41
GLY 106 0.27 GLN 105 -0.99 LYS 41
ALA 143 0.28 GLY 106 -0.73 MET 32
ILE 148 0.26 THR 107 -0.55 MET 32
ILE 148 0.27 THR 107 -0.55 MET 32
ALA 103 0.24 ILE 108 -0.57 MET 32
ALA 143 0.21 LEU 109 -0.64 MET 32
ALA 143 0.28 ALA 110 -0.49 MET 32
MET 145 0.20 ALA 111 -0.42 MET 32
ALA 103 0.14 VAL 112 -0.46 MET 32
ALA 143 0.17 GLY 113 -0.43 MET 32
ALA 144 0.20 ALA 114 -0.34 MET 32
PRO 186 0.08 ASP 115 -0.33 MET 32
THR 142 0.06 GLY 116 -0.33 MET 32
SER 141 0.07 ILE 117 -0.29 MET 32
THR 142 0.06 MET 118 -0.26 MET 32
THR 142 0.04 ILE 119 -0.26 MET 32
ALA 84 0.05 GLY 120 -0.27 MET 32
GLY 65 0.05 THR 121 -0.25 THR 128
GLY 65 0.05 GLY 122 -0.21 MET 32
VAL 124 0.08 LEU 123 -0.22 MET 32
GLY 65 0.11 VAL 124 -0.26 THR 128
LEU 66 0.08 GLY 125 -0.19 MET 32
GLY 125 0.07 ALA 126 -0.17 MET 32
THR 67 0.14 LEU 127 -0.23 GLY 116
THR 67 0.16 THR 128 -0.26 VAL 124
VAL 69 0.15 LYS 129 -0.26 GLY 73
VAL 69 0.10 VAL 130 -0.21 GLY 73
PRO 200 0.08 TYR 131 -0.13 MET 32
SER 132 0.09 SER 132 -0.13 MET 32
SER 132 0.09 SER 132 -0.13 MET 32
THR 67 0.09 TYR 133 -0.16 MET 32
THR 67 0.07 ARG 134 -0.16 MET 32
GLY 106 0.12 PHE 135 -0.14 MET 32
GLY 106 0.12 VAL 136 -0.17 MET 32
GLY 65 0.07 TRP 137 -0.19 MET 32
GLY 106 0.11 TRP 138 -0.17 MET 32
GLY 106 0.20 ALA 139 -0.17 MET 32
GLY 106 0.18 ILE 140 -0.20 MET 32
GLY 106 0.13 SER 141 -0.21 MET 32
ALA 110 0.21 THR 142 -0.20 VAL 179
ALA 110 0.21 THR 142 -0.20 VAL 179
GLY 106 0.28 ALA 143 -0.21 MET 32
ALA 110 0.26 ALA 144 -0.25 MET 32
ALA 110 0.23 MET 145 -0.22 MET 32
ALA 110 0.23 MET 145 -0.22 MET 32
VAL 187 0.34 LEU 146 -0.22 MET 32
GLY 106 0.27 TYR 147 -0.28 MET 32
THR 107 0.27 ILE 148 -0.28 MET 32
SER 183 0.32 LEU 149 -0.21 MET 32
SER 183 0.38 TYR 150 -0.25 ASP 38
SER 183 0.26 VAL 151 -0.31 MET 32
SER 183 0.26 VAL 151 -0.31 MET 32
VAL 180 0.22 LEU 152 -0.33 ALA 98
VAL 180 0.32 PHE 153 -0.27 ASP 38
VAL 180 0.30 PHE 154 -0.33 ASP 38
ASP 104 0.23 GLY 155 -0.40 ASP 38
ASP 104 0.18 PHE 156 -0.40 ASP 38
ASN 176 0.19 THR 157 -0.37 ASP 38
ASP 104 0.21 SER 158 -0.43 ASP 38
ASP 104 0.21 SER 158 -0.42 ASP 38
ASP 104 0.23 LYS 159 -0.55 ASP 38
LYS 159 0.17 ALA 160 -0.50 ASP 38
ASP 104 0.18 GLU 161 -0.44 ASP 38
ASP 104 0.19 GLU 161 -0.44 ASP 38
ASP 104 0.19 GLU 161 -0.44 ASP 38
ASP 104 0.24 SER 162 -0.56 GLY 231
ASP 104 0.24 SER 162 -0.56 GLY 231
ARG 164 0.19 MET 163 -0.65 GLY 231
ASP 102 0.23 ARG 164 -0.35 GLY 231
ASP 102 0.23 ARG 164 -0.36 GLY 231
GLY 33 0.25 PRO 165 -0.21 GLY 231
GLY 33 0.31 GLU 166 -0.21 VAL 173
GLY 33 0.31 GLU 166 -0.21 VAL 173
GLY 33 0.18 VAL 167 -0.31 GLY 231
GLY 33 0.18 ALA 168 -0.30 GLY 231
GLY 33 0.32 SER 169 -0.20 VAL 173
GLY 33 0.32 SER 169 -0.20 VAL 173
GLY 33 0.31 THR 170 -0.17 VAL 177
ARG 225 0.18 PHE 171 -0.25 ASP 38
LEU 221 0.25 LYS 172 -0.20 ASP 38
LEU 221 0.40 VAL 173 -0.21 GLU 166
LEU 221 0.32 LEU 174 -0.15 GLN 105
LEU 221 0.22 ARG 175 -0.19 ALA 98
LEU 221 0.28 ASN 176 -0.20 THR 142
GLY 218 0.31 VAL 177 -0.17 GLU 166
PHE 153 0.20 THR 178 -0.14 ASN 176
PHE 153 0.30 VAL 179 -0.20 THR 142
TYR 150 0.33 VAL 180 -0.16 THR 142
TYR 150 0.26 LEU 181 -0.12 GLU 166
TYR 150 0.26 TRP 182 -0.13 THR 142
TYR 150 0.38 SER 183 -0.19 THR 142
TYR 150 0.33 ALA 184 -0.10 GLU 166
TYR 150 0.24 TYR 185 -0.08 MET 32
LEU 146 0.28 PRO 186 -0.10 MET 32
LEU 146 0.34 VAL 187 -0.07 GLU 166
TYR 150 0.27 VAL 188 -0.05 GLU 166
LEU 146 0.21 TRP 189 -0.08 MET 32
LEU 146 0.27 LEU 190 -0.07 MET 32
LEU 146 0.27 ILE 191 -0.05 PHE 135
GLU 74 0.26 GLY 192 -0.05 ARG 7
GLU 74 0.27 SER 193 -0.12 GLY 197
GLU 74 0.27 SER 193 -0.12 GLY 197
GLY 72 0.14 GLU 194 -0.10 MET 32
LEU 146 0.19 GLY 195 -0.08 MET 32
GLY 72 0.30 ALA 196 -0.08 GLY 195
GLY 73 0.35 GLY 197 -0.12 SER 193
GLY 73 0.36 ILE 198 -0.09 ARG 7
GLU 74 0.33 VAL 199 -0.14 PRO 200
GLU 74 0.44 PRO 200 -0.14 VAL 199
GLU 74 0.34 LEU 201 -0.11 GLN 105
GLU 74 0.33 ASN 202 -0.12 GLN 105
GLU 74 0.31 ILE 203 -0.09 GLN 105
GLU 74 0.31 ILE 203 -0.09 GLN 105
GLU 74 0.27 GLU 204 -0.09 GLN 105
GLU 74 0.22 THR 205 -0.14 GLN 105
GLU 74 0.24 LEU 206 -0.13 GLN 105
GLU 74 0.22 LEU 207 -0.09 GLN 105
GLU 74 0.18 PHE 208 -0.14 GLN 105
GLY 23 0.22 MET 209 -0.18 GLN 105
GLY 23 0.22 MET 209 -0.18 GLN 105
GLY 23 0.28 VAL 210 -0.15 GLN 105
GLY 23 0.22 LEU 211 -0.13 GLN 105
GLY 23 0.18 ASP 212 -0.21 GLN 105
GLY 23 0.31 VAL 213 -0.24 GLN 105
TYR 26 0.28 SER 214 -0.19 GLN 105
TYR 26 0.18 ALA 215 -0.21 GLN 105
ALA 215 0.16 LYS 216 -0.31 GLN 105
SER 214 0.25 VAL 217 -0.32 GLN 105
VAL 177 0.31 GLY 218 -0.24 GLN 105
VAL 177 0.24 PHE 219 -0.25 GLN 105
LYS 30 0.23 GLY 220 -0.39 GLN 105
VAL 173 0.40 LEU 221 -0.32 GLN 105
GLY 33 0.40 ILE 222 -0.24 GLN 105
GLY 33 0.29 LEU 223 -0.31 GLN 105
GLY 33 0.34 LEU 224 -0.41 GLN 105
GLY 33 0.51 ARG 225 -0.30 GLN 105
GLY 33 0.52 ARG 225 -0.30 GLN 105
GLY 33 0.48 SER 226 -0.24 GLN 105
GLY 33 0.48 SER 226 -0.24 GLN 105
GLY 33 0.42 ARG 227 -0.19 GLN 105
GLY 33 0.42 ARG 227 -0.19 GLN 105
GLY 33 0.23 ALA 228 -0.17 GLN 105
GLY 33 0.16 ILE 229 -0.36 GLN 105
GLY 33 0.18 PHE 230 -0.42 MET 163
ALA 44 0.14 GLY 231 -0.65 MET 163

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.