CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  TRANSPORT PROTEIN 08-AUG-19 6SHU  ***

<R2> analysis for 2409110935463135082

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0756
LYS 80.0478
SER 90.0372
GLU 100.0401
ALA 110.0346
LYS 120.0256
THR 130.0201
VAL 140.0142
SER 150.0115
LEU 160.0098
ILE 170.0125
VAL 180.0120
ASP 190.0144
GLY 200.0138
ALA 210.0137
PHE 220.0121
ASP 230.0088
ASP 240.0023
LYS 250.0040
GLY 260.0047
PHE 270.0048
ASN 280.0081
GLU 290.0084
SER 300.0065
SER 310.0070
SER 320.0134
LYS 330.0137
ALA 340.0142
ILE 350.0167
ARG 360.0249
LYS 370.0268
LEU 380.0267
LYS 390.0314
ALA 400.0383
ASP 410.0394
LEU 420.0391
ASN 430.0406
ILE 440.0322
ASN 450.0291
ILE 460.0226
ILE 470.0210
GLU 480.0184
LYS 490.0201
ALA 500.0202
SER 510.0215
THR 520.0243
GLY 530.0262
ASN 540.0351
SER 550.0310
TYR 560.0237
LEU 570.0263
GLY 580.0276
ASP 590.0232
ILE 600.0172
ALA 610.0194
ASN 620.0204
LEU 630.0141
GLU 640.0098
ASP 650.0148
GLY 660.0165
ASN 670.0099
SER 680.0095
ASN 690.0117
LEU 700.0077
ILE 710.0018
TRP 720.0013
GLY 730.0066
ILE 740.0062
GLY 750.0083
PHE 760.0101
ARG 770.0128
LEU 780.0155
SER 790.0169
ASP 800.0258
ILE 810.0229
LEU 820.0168
PHE 830.0231
GLN 840.0269
ARG 850.0198
ALA 860.0181
SER 870.0263
SER 870.0263
GLU 880.0252
ASN 890.0171
VAL 900.0197
SER 910.0135
SER 910.0136
VAL 920.0082
ASN 930.0108
TYR 940.0080
ALA 950.0084
ILE 960.0065
ILE 970.0047
GLU 980.0069
GLY 990.0117
VAL 1000.0171
TYR 1010.0279
ASP 1020.0541
GLU 1030.0756
ILE 1040.0472
GLN 1050.0426
ILE 1060.0307
PRO 1070.0298
LYS 1080.0299
ASN 1090.0208
LEU 1100.0179
LEU 1110.0174
ASN 1120.0138
ILE 1130.0100
SER 1140.0057
PHE 1150.0026
ARG 1160.0073
ARG 1160.0073
SER 1170.0071
GLU 1180.0097
GLU 1190.0113
VAL 1200.0089
ALA 1210.0066
PHE 1220.0104
LEU 1230.0102
ALA 1240.0054
GLY 1250.0053
TYR 1260.0081
PHE 1270.0064
ALA 1280.0015
SER 1290.0028
LYS 1300.0039
ALA 1310.0052
SER 1320.0056
LYS 1330.0092
THR 1340.0117
GLY 1350.0085
LYS 1360.0112
ILE 1370.0084
GLY 1380.0087
PHE 1390.0071
VAL 1400.0072
GLY 1410.0062
GLY 1420.0044
VAL 1430.0040
ARG 1440.0070
GLY 1450.0080
LYS 1460.0068
VAL 1470.0040
LEU 1480.0055
GLU 1490.0090
SER 1500.0083
SER 1500.0083
PHE 1510.0058
MET 1520.0083
TYR 1530.0120
GLY 1540.0108
TYR 1550.0074
GLU 1560.0113
ALA 1570.0142
GLY 1580.0116
ALA 1590.0088
LYS 1600.0140
TYR 1610.0156
ALA 1620.0109
ASN 1630.0106
SER 1640.0159
ASN 1650.0152
ILE 1660.0111
LYS 1670.0141
VAL 1680.0121
VAL 1690.0148
SER 1700.0121
GLN 1710.0128
TYR 1720.0094
VAL 1730.0096
GLY 1740.0078
THR 1750.0047
PHE 1760.0011
GLY 1770.0019
ASP 1780.0084
PHE 1790.0096
GLY 1800.0141
LEU 1810.0137
GLY 1820.0113
ARG 1830.0156
SER 1840.0188
THR 1850.0161
ALA 1860.0152
SER 1870.0205
ASN 1880.0221
MET 1890.0179
TYR 1900.0190
ARG 1910.0241
ASP 1920.0229
ASP 1920.0229
GLY 1930.0193
VAL 1940.0143
ASP 1950.0126
ILE 1960.0082
ILE 1970.0071
PHE 1980.0028
ALA 1990.0040
ALA 2000.0012
ALA 2010.0022
GLY 2020.0013
LEU 2030.0010
SER 2040.0052
GLY 2050.0051
ILE 2060.0079
GLY 2070.0110
VAL 2080.0115
ILE 2090.0126
GLU 2100.0171
ALA 2110.0184
ALA 2120.0179
LYS 2130.0214
GLU 2140.0250
LEU 2150.0248
GLY 2160.0252
PRO 2170.0231
ASP 2180.0186
HIS 2190.0167
TYR 2200.0123
ILE 2210.0091
ILE 2220.0054
GLY 2230.0063
VAL 2240.0038
ASP 2250.0048
GLN 2260.0071
ASP 2270.0117
GLN 2280.0112
SER 2290.0155
TYR 2300.0182
LEU 2310.0153
ALA 2320.0188
PRO 2330.0215
ASN 2340.0219
ASN 2350.0170
VAL 2360.0133
ILE 2370.0126
VAL 2380.0105
SER 2390.0085
ALA 2400.0064
VAL 2410.0073
LYS 2420.0046
LYS 2430.0032
VAL 2440.0014
ASP 2450.0065
SER 2460.0100
LEU 2470.0090
MET 2480.0103
TYR 2490.0180
SER 2500.0227
SER 2500.0227
LEU 2510.0195
THR 2520.0189
LYS 2530.0279
LYS 2540.0318
TYR 2550.0263
LEU 2560.0291
GLU 2570.0376
THR 2580.0363
GLY 2590.0283
VAL 2600.0275
LEU 2610.0240
ASP 2620.0294
GLY 2630.0263
GLY 2640.0314
LYS 2650.0298
THR 2660.0193
MET 2670.0160
PHE 2680.0044
LEU 2690.0031
GLY 2700.0084
LEU 2710.0117
LYS 2720.0140
GLU 2730.0110
ASP 2740.0089
GLY 2750.0062
LEU 2760.0084
GLY 2770.0094
LEU 2780.0124
VAL 2790.0141
LEU 2800.0170
ASN 2810.0189
GLU 2820.0245
ASN 2830.0255
LEU 2840.0215
LYS 2850.0228
SER 2860.0245
ASN 2870.0193
TYR 2880.0154
SER 2890.0191
GLU 2900.0173
ILE 2910.0126
TYR 2920.0151
ASN 2930.0195
LYS 2940.0171
SER 2950.0149
LEU 2960.0199
LYS 2970.0223
ILE 2980.0197
GLY 2990.0199
GLN 3000.0255
SER 3010.0262
ILE 3020.0222
MET 3030.0235
ASN 3040.0304
GLY 3050.0297
ILE 3060.0299
ILE 3070.0250
LYS 3080.0249
VAL 3090.0186
PRO 3100.0181
TYR 3110.0145
ASP 3120.0167
LYS 3130.0216
VAL 3140.0264
SER 3150.0244
TYR 3160.0221
ASP 3170.0279
ASN 3180.0317
PHE 3190.0269
VAL 3200.0271
LEU 3210.0351
GLN 3220.0366
MET 3230.0307

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.