CNRS Nantes University US2B US2B
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***  TRANSPORT PROTEIN 08-AUG-19 6SHU  ***

<R2> analysis for 2409110935463135082

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0858
LYS 80.0518
SER 90.0390
GLU 100.0413
ALA 110.0376
LYS 120.0283
THR 130.0227
VAL 140.0186
SER 150.0159
LEU 160.0147
ILE 170.0145
VAL 180.0137
ASP 190.0134
GLY 200.0089
ALA 210.0063
PHE 220.0086
ASP 230.0031
ASP 240.0028
LYS 250.0046
GLY 260.0058
PHE 270.0081
ASN 280.0111
GLU 290.0093
SER 300.0125
SER 310.0138
SER 320.0168
LYS 330.0159
ALA 340.0204
ILE 350.0193
ARG 360.0262
LYS 370.0318
LEU 380.0295
LYS 390.0325
ALA 400.0416
ASP 410.0429
LEU 420.0404
ASN 430.0415
ILE 440.0330
ASN 450.0283
ILE 460.0214
ILE 470.0176
GLU 480.0158
LYS 490.0149
ALA 500.0148
SER 510.0148
THR 520.0152
GLY 530.0146
ASN 540.0161
SER 550.0152
TYR 560.0128
LEU 570.0111
GLY 580.0109
ASP 590.0132
ILE 600.0124
ALA 610.0094
ASN 620.0114
LEU 630.0133
GLU 640.0124
ASP 650.0124
GLY 660.0172
ASN 670.0175
SER 680.0162
ASN 690.0172
LEU 700.0145
ILE 710.0137
TRP 720.0138
GLY 730.0137
ILE 740.0139
GLY 750.0142
PHE 760.0116
ARG 770.0126
LEU 780.0133
SER 790.0129
ASP 800.0128
ILE 810.0122
LEU 820.0122
PHE 830.0116
GLN 840.0094
ARG 850.0096
ALA 860.0099
SER 870.0078
SER 870.0078
GLU 880.0060
ASN 890.0082
VAL 900.0083
SER 910.0112
SER 910.0112
VAL 920.0115
ASN 930.0126
TYR 940.0125
ALA 950.0138
ILE 960.0135
ILE 970.0137
GLU 980.0112
GLY 990.0137
VAL 1000.0127
TYR 1010.0134
ASP 1020.0148
GLU 1030.0146
ILE 1040.0135
GLN 1050.0131
ILE 1060.0123
PRO 1070.0111
LYS 1080.0106
ASN 1090.0109
LEU 1100.0121
LEU 1110.0131
ASN 1120.0136
ILE 1130.0122
SER 1140.0064
PHE 1150.0049
ARG 1160.0050
ARG 1160.0050
SER 1170.0039
GLU 1180.0078
GLU 1190.0064
VAL 1200.0033
ALA 1210.0043
PHE 1220.0060
LEU 1230.0026
ALA 1240.0033
GLY 1250.0069
TYR 1260.0060
PHE 1270.0047
ALA 1280.0077
SER 1290.0124
LYS 1300.0125
ALA 1310.0099
SER 1320.0128
LYS 1330.0170
THR 1340.0196
GLY 1350.0202
LYS 1360.0197
ILE 1370.0157
GLY 1380.0138
PHE 1390.0110
VAL 1400.0110
GLY 1410.0075
GLY 1420.0062
VAL 1430.0044
ARG 1440.0037
GLY 1450.0051
LYS 1460.0051
VAL 1470.0041
LEU 1480.0041
GLU 1490.0049
SER 1500.0074
SER 1500.0074
PHE 1510.0053
MET 1520.0077
TYR 1530.0109
GLY 1540.0074
TYR 1550.0077
GLU 1560.0111
ALA 1570.0122
GLY 1580.0076
ALA 1590.0115
LYS 1600.0164
TYR 1610.0101
ALA 1620.0127
ASN 1630.0206
SER 1640.0266
ASN 1650.0328
ILE 1660.0227
LYS 1670.0241
VAL 1680.0172
VAL 1690.0184
SER 1700.0124
GLN 1710.0144
TYR 1720.0092
VAL 1730.0101
GLY 1740.0076
THR 1750.0062
PHE 1760.0045
GLY 1770.0075
ASP 1780.0164
PHE 1790.0199
GLY 1800.0255
LEU 1810.0229
GLY 1820.0201
ARG 1830.0266
SER 1840.0297
THR 1850.0255
ALA 1860.0249
SER 1870.0306
ASN 1880.0324
MET 1890.0266
TYR 1900.0263
ARG 1910.0313
ASP 1920.0310
ASP 1920.0310
GLY 1930.0250
VAL 1940.0213
ASP 1950.0166
ILE 1960.0123
ILE 1970.0135
PHE 1980.0075
ALA 1990.0093
ALA 2000.0068
ALA 2010.0069
GLY 2020.0037
LEU 2030.0066
SER 2040.0113
GLY 2050.0115
ILE 2060.0159
GLY 2070.0199
VAL 2080.0201
ILE 2090.0203
GLU 2100.0285
ALA 2110.0289
ALA 2120.0253
LYS 2130.0287
GLU 2140.0349
LEU 2150.0321
GLY 2160.0275
PRO 2170.0204
ASP 2180.0158
HIS 2190.0194
TYR 2200.0129
ILE 2210.0126
ILE 2220.0060
GLY 2230.0081
VAL 2240.0035
ASP 2250.0038
GLN 2260.0055
ASP 2270.0114
GLN 2280.0133
SER 2290.0164
TYR 2300.0219
LEU 2310.0211
ALA 2320.0220
PRO 2330.0201
ASN 2340.0180
ASN 2350.0165
VAL 2360.0124
ILE 2370.0071
VAL 2380.0058
SER 2390.0072
ALA 2400.0038
VAL 2410.0046
LYS 2420.0055
LYS 2430.0050
VAL 2440.0127
ASP 2450.0134
SER 2460.0154
LEU 2470.0141
MET 2480.0158
TYR 2490.0203
SER 2500.0204
SER 2500.0204
LEU 2510.0168
THR 2520.0182
LYS 2530.0226
LYS 2540.0210
TYR 2550.0190
LEU 2560.0233
GLU 2570.0248
THR 2580.0217
GLY 2590.0202
VAL 2600.0158
LEU 2610.0139
ASP 2620.0133
GLY 2630.0123
GLY 2640.0126
LYS 2650.0135
THR 2660.0123
MET 2670.0108
PHE 2680.0049
LEU 2690.0029
GLY 2700.0050
LEU 2710.0059
LYS 2720.0087
GLU 2730.0054
ASP 2740.0040
GLY 2750.0021
LEU 2760.0033
GLY 2770.0043
LEU 2780.0065
VAL 2790.0085
LEU 2800.0099
ASN 2810.0119
GLU 2820.0167
ASN 2830.0151
LEU 2840.0071
LYS 2850.0101
SER 2860.0097
ASN 2870.0060
TYR 2880.0064
SER 2890.0118
GLU 2900.0166
ILE 2910.0110
TYR 2920.0082
ASN 2930.0134
LYS 2940.0118
SER 2950.0057
LEU 2960.0090
LYS 2970.0087
ILE 2980.0030
GLY 2990.0086
GLN 3000.0134
SER 3010.0114
ILE 3020.0138
MET 3030.0170
ASN 3040.0227
GLY 3050.0235
ILE 3060.0173
ILE 3070.0159
LYS 3080.0270
VAL 3090.0185
PRO 3100.0231
TYR 3110.0180
ASP 3120.0206
LYS 3130.0283
VAL 3140.0402
SER 3150.0378
TYR 3160.0320
ASP 3170.0460
ASN 3180.0617
PHE 3190.0445
VAL 3200.0475
LEU 3210.0790
GLN 3220.0858
MET 3230.0576

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.