Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873

--- normal mode 70 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.1776
ARG 6 0.0364
THR 7 0.0330
PRO 8 0.0266
SER 9 0.0273
ASP 10 0.0210
LYS 11 0.0101
PRO 12 0.0139
VAL 13 0.0163
ALA 14 0.0198
HIS 15 0.0154
VAL 16 0.0104
VAL 17 0.0107
ALA 18 0.0145
ASN 19 0.0121
PRO 20 0.0101
GLN 21 0.0298
ALA 22 0.0054
GLU 23 0.0262
GLY 24 0.0146
GLN 25 0.0095
LEU 26 0.0140
GLN 27 0.0164
TRP 28 0.0084
LEU 29 0.0093
ASN 30 0.0389
ARG 31 0.0582
ARG 32 0.0501
ALA 33 0.0356
ASN 34 0.0213
ALA 35 0.0300
LEU 36 0.0290
LEU 37 0.0257
ALA 38 0.0219
ASN 39 0.0114
GLY 40 0.0108
VAL 41 0.0118
GLU 42 0.0127
LEU 43 0.0119
ARG 44 0.0254
ASP 45 0.0274
ASN 46 0.0207
GLN 47 0.0117
LEU 48 0.0048
VAL 49 0.0078
VAL 50 0.0080
PRO 51 0.0068
SER 52 0.0067
GLU 53 0.0054
GLY 54 0.0054
LEU 55 0.0052
TYR 56 0.0049
LEU 57 0.0027
ILE 58 0.0012
TYR 59 0.0033
SER 60 0.0073
GLN 61 0.0077
VAL 62 0.0079
LEU 63 0.0090
PHE 64 0.0057
LYS 65 0.0067
GLY 66 0.0161
GLN 67 0.0153
GLY 68 0.0156
CYS 69 0.0159
PRO 70 0.0284
SER 71 0.0382
THR 72 0.0196
HIS 73 0.0153
VAL 74 0.0105
LEU 75 0.0097
LEU 76 0.0063
THR 77 0.0058
HIS 78 0.0079
THR 79 0.0087
ILE 80 0.0092
SER 81 0.0140
ARG 82 0.0115
ILE 83 0.0089
ALA 84 0.0128
VAL 85 0.0200
SER 86 0.0445
TYR 87 0.0251
GLN 88 0.0235
THR 89 0.0167
LYS 90 0.0141
VAL 91 0.0142
ASN 92 0.0155
LEU 93 0.0089
LEU 94 0.0065
SER 95 0.0062
ALA 96 0.0066
ILE 97 0.0067
LYS 98 0.0076
SER 99 0.0102
PRO 100 0.0105
CYS 101 0.0131
GLN 102 0.0170
ARG 103 0.0149
GLU 104 0.0111
THR 105 0.0230
PRO 106 0.0200
GLU 107 0.0186
GLY 108 0.0311
ALA 109 0.0174
GLU 110 0.0086
ALA 111 0.0122
LYS 112 0.0102
PRO 113 0.0137
TRP 114 0.0067
TYR 115 0.0051
GLU 116 0.0025
PRO 117 0.0038
ILE 118 0.0035
TYR 119 0.0034
LEU 120 0.0038
GLY 121 0.0022
GLY 122 0.0032
VAL 123 0.0040
PHE 124 0.0041
GLN 125 0.0047
LEU 126 0.0058
GLU 127 0.0053
LYS 128 0.0078
GLY 129 0.0125
ASP 130 0.0114
ARG 131 0.0111
LEU 132 0.0107
SER 133 0.0111
ALA 134 0.0096
GLU 135 0.0117
ILE 136 0.0099
ASN 137 0.0092
ARG 138 0.0114
PRO 139 0.0129
ASP 140 0.0147
TYR 141 0.0087
LEU 142 0.0100
LEU 143 0.0122
PHE 144 0.0087
ALA 145 0.0118
GLU 146 0.0145
SER 147 0.0144
GLY 148 0.0136
GLN 149 0.0132
VAL 150 0.0088
TYR 151 0.0063
PHE 152 0.0064
GLY 153 0.0082
ILE 154 0.0072
ILE 155 0.0071
ALA 156 0.0086
LEU 157 0.0061
ARG 6 0.0073
THR 7 0.0064
PRO 8 0.0095
SER 9 0.0084
ASP 10 0.0087
LYS 11 0.0047
PRO 12 0.0038
VAL 13 0.0031
ALA 14 0.0051
HIS 15 0.0058
VAL 16 0.0060
VAL 17 0.0070
ALA 18 0.0093
ASN 19 0.0059
PRO 20 0.0061
GLN 21 0.0058
ALA 22 0.0086
GLU 23 0.0264
GLY 24 0.0179
GLN 25 0.0137
LEU 26 0.0104
GLN 27 0.0053
TRP 28 0.0057
LEU 29 0.0044
ASN 30 0.0049
ARG 31 0.0241
ARG 32 0.0212
ALA 33 0.0141
ASN 34 0.0078
ALA 35 0.0090
LEU 36 0.0073
LEU 37 0.0035
ALA 38 0.0022
ASN 39 0.0058
GLY 40 0.0083
VAL 41 0.0067
GLU 42 0.0038
LEU 43 0.0047
ARG 44 0.0065
ASP 45 0.0070
ASN 46 0.0066
GLN 47 0.0048
LEU 48 0.0070
VAL 49 0.0074
VAL 50 0.0089
PRO 51 0.0107
SER 52 0.0139
GLU 53 0.0161
GLY 54 0.0121
LEU 55 0.0119
TYR 56 0.0108
LEU 57 0.0052
ILE 58 0.0054
TYR 59 0.0058
SER 60 0.0047
GLN 61 0.0041
VAL 62 0.0047
LEU 63 0.0086
PHE 64 0.0107
LYS 65 0.0138
GLY 66 0.0162
GLN 67 0.0156
GLY 68 0.0150
CYS 69 0.0218
PRO 70 0.0299
SER 71 0.0338
THR 72 0.0319
HIS 73 0.0146
VAL 74 0.0049
LEU 75 0.0054
LEU 76 0.0072
THR 77 0.0088
HIS 78 0.0009
THR 79 0.0010
ILE 80 0.0010
SER 81 0.0076
ARG 82 0.0065
ILE 83 0.0046
ALA 84 0.0067
VAL 85 0.0096
SER 86 0.0136
TYR 87 0.0135
GLN 88 0.0080
THR 89 0.0072
LYS 90 0.0063
VAL 91 0.0073
ASN 92 0.0079
LEU 93 0.0038
LEU 94 0.0040
SER 95 0.0044
ALA 96 0.0069
ILE 97 0.0065
LYS 98 0.0064
SER 99 0.0074
PRO 100 0.0088
CYS 101 0.0077
GLN 102 0.0043
ARG 103 0.0088
GLU 104 0.0165
THR 105 0.0256
PRO 106 0.0259
GLU 107 0.0559
GLY 108 0.1776
ALA 109 0.0921
GLU 110 0.0656
ALA 111 0.0150
LYS 112 0.0199
PRO 113 0.0218
TRP 114 0.0143
TYR 115 0.0134
GLU 116 0.0113
PRO 117 0.0041
ILE 118 0.0040
TYR 119 0.0029
LEU 120 0.0024
GLY 121 0.0026
GLY 122 0.0025
VAL 123 0.0089
PHE 124 0.0093
GLN 125 0.0097
LEU 126 0.0155
GLU 127 0.0154
LYS 128 0.0134
GLY 129 0.0105
ASP 130 0.0099
ARG 131 0.0085
LEU 132 0.0050
SER 133 0.0053
ALA 134 0.0051
GLU 135 0.0061
ILE 136 0.0077
ASN 137 0.0093
ARG 138 0.0143
PRO 139 0.0180
ASP 140 0.0185
TYR 141 0.0147
LEU 142 0.0136
LEU 143 0.0135
PHE 144 0.0116
ALA 145 0.0105
GLU 146 0.0113
SER 147 0.0110
GLY 148 0.0098
GLN 149 0.0076
VAL 150 0.0083
TYR 151 0.0069
PHE 152 0.0054
GLY 153 0.0065
ILE 154 0.0059
ILE 155 0.0044
ALA 156 0.0070
LEU 157 0.0076
ARG 6 0.0102
THR 7 0.0105
PRO 8 0.0126
SER 9 0.0124
ASP 10 0.0096
LYS 11 0.0080
PRO 12 0.0055
VAL 13 0.0062
ALA 14 0.0056
HIS 15 0.0018
VAL 16 0.0038
VAL 17 0.0075
ALA 18 0.0092
ASN 19 0.0122
PRO 20 0.0177
GLN 21 0.0174
ALA 22 0.0020
GLU 23 0.0296
GLY 24 0.0129
GLN 25 0.0106
LEU 26 0.0098
GLN 27 0.0076
TRP 28 0.0071
LEU 29 0.0100
ASN 30 0.0123
ARG 31 0.0126
ARG 32 0.0121
ALA 33 0.0033
ASN 34 0.0033
ALA 35 0.0032
LEU 36 0.0040
LEU 37 0.0019
ALA 38 0.0036
ASN 39 0.0051
GLY 40 0.0038
VAL 41 0.0030
GLU 42 0.0037
LEU 43 0.0047
ARG 44 0.0082
ASP 45 0.0061
ASN 46 0.0040
GLN 47 0.0026
LEU 48 0.0040
VAL 49 0.0040
VAL 50 0.0034
PRO 51 0.0041
SER 52 0.0053
GLU 53 0.0060
GLY 54 0.0076
LEU 55 0.0081
TYR 56 0.0074
LEU 57 0.0050
ILE 58 0.0048
TYR 59 0.0050
SER 60 0.0025
GLN 61 0.0033
VAL 62 0.0033
LEU 63 0.0057
PHE 64 0.0054
LYS 65 0.0022
GLY 66 0.0042
GLN 67 0.0098
GLY 68 0.0118
CYS 69 0.0140
PRO 70 0.0270
SER 71 0.0306
THR 72 0.0266
HIS 73 0.0198
VAL 74 0.0135
LEU 75 0.0142
LEU 76 0.0141
THR 77 0.0151
HIS 78 0.0099
THR 79 0.0079
ILE 80 0.0044
SER 81 0.0034
ARG 82 0.0021
ILE 83 0.0012
ALA 84 0.0022
VAL 85 0.0039
SER 86 0.0043
TYR 87 0.0037
GLN 88 0.0015
THR 89 0.0021
LYS 90 0.0057
VAL 91 0.0066
ASN 92 0.0081
LEU 93 0.0044
LEU 94 0.0049
SER 95 0.0079
ALA 96 0.0072
ILE 97 0.0088
LYS 98 0.0081
SER 99 0.0136
PRO 100 0.0092
CYS 101 0.0068
GLN 102 0.0161
ARG 103 0.0166
GLU 104 0.0151
THR 105 0.0209
PRO 106 0.0215
GLU 107 0.0156
GLY 108 0.0213
ALA 109 0.0057
GLU 110 0.0098
ALA 111 0.0069
LYS 112 0.0063
PRO 113 0.0056
TRP 114 0.0046
TYR 115 0.0050
GLU 116 0.0063
PRO 117 0.0044
ILE 118 0.0048
TYR 119 0.0033
LEU 120 0.0033
GLY 121 0.0038
GLY 122 0.0040
VAL 123 0.0055
PHE 124 0.0064
GLN 125 0.0074
LEU 126 0.0062
GLU 127 0.0052
LYS 128 0.0049
GLY 129 0.0035
ASP 130 0.0033
ARG 131 0.0033
LEU 132 0.0013
SER 133 0.0012
ALA 134 0.0026
GLU 135 0.0098
ILE 136 0.0139
ASN 137 0.0194
ARG 138 0.0206
PRO 139 0.0190
ASP 140 0.0176
TYR 141 0.0109
LEU 142 0.0084
LEU 143 0.0037
PHE 144 0.0135
ALA 145 0.0146
GLU 146 0.0157
SER 147 0.0064
GLY 148 0.0054
GLN 149 0.0067
VAL 150 0.0055
TYR 151 0.0035
PHE 152 0.0025
GLY 153 0.0061
ILE 154 0.0061
ILE 155 0.0064
ALA 156 0.0084
LEU 157 0.0058

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** LYMPHOKINE 25-AUG-89 1TNF ***

<R2> analysis for 2406080142331607873

--- normal mode 70 ---

Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873