Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873

--- normal mode 7 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.1285
ARG 6 0.0179
THR 7 0.0178
PRO 8 0.0170
SER 9 0.0183
ASP 10 0.0198
LYS 11 0.0161
PRO 12 0.0137
VAL 13 0.0096
ALA 14 0.0057
HIS 15 0.0040
VAL 16 0.0053
VAL 17 0.0097
ALA 18 0.0142
ASN 19 0.0197
PRO 20 0.0240
GLN 21 0.0315
ALA 22 0.0299
GLU 23 0.0347
GLY 24 0.0321
GLN 25 0.0263
LEU 26 0.0189
GLN 27 0.0164
TRP 28 0.0115
LEU 29 0.0113
ASN 30 0.0086
ARG 31 0.0123
ARG 32 0.0152
ALA 33 0.0126
ASN 34 0.0099
ALA 35 0.0094
LEU 36 0.0090
LEU 37 0.0082
ALA 38 0.0128
ASN 39 0.0166
GLY 40 0.0155
VAL 41 0.0107
GLU 42 0.0072
LEU 43 0.0018
ARG 44 0.0049
ASP 45 0.0094
ASN 46 0.0100
GLN 47 0.0083
LEU 48 0.0053
VAL 49 0.0100
VAL 50 0.0132
PRO 51 0.0179
SER 52 0.0222
GLU 53 0.0248
GLY 54 0.0176
LEU 55 0.0126
TYR 56 0.0089
LEU 57 0.0037
ILE 58 0.0030
TYR 59 0.0024
SER 60 0.0062
GLN 61 0.0075
VAL 62 0.0100
LEU 63 0.0117
PHE 64 0.0127
LYS 65 0.0139
GLY 66 0.0136
GLN 67 0.0127
GLY 68 0.0071
CYS 69 0.0037
PRO 70 0.0083
SER 71 0.0125
THR 72 0.0122
HIS 73 0.0147
VAL 74 0.0147
LEU 75 0.0123
LEU 76 0.0125
THR 77 0.0141
HIS 78 0.0118
THR 79 0.0105
ILE 80 0.0078
SER 81 0.0136
ARG 82 0.0143
ILE 83 0.0177
ALA 84 0.0216
VAL 85 0.0249
SER 86 0.0306
TYR 87 0.0297
GLN 88 0.0277
THR 89 0.0265
LYS 90 0.0199
VAL 91 0.0177
ASN 92 0.0135
LEU 93 0.0069
LEU 94 0.0066
SER 95 0.0087
ALA 96 0.0077
ILE 97 0.0089
LYS 98 0.0075
SER 99 0.0077
PRO 100 0.0045
CYS 101 0.0022
GLN 102 0.0101
ARG 103 0.0100
GLU 104 0.0090
THR 105 0.0037
PRO 106 0.0072
GLU 107 0.0096
GLY 108 0.0180
ALA 109 0.0191
GLU 110 0.0130
ALA 111 0.0130
LYS 112 0.0144
PRO 113 0.0135
TRP 114 0.0079
TYR 115 0.0091
GLU 116 0.0077
PRO 117 0.0080
ILE 118 0.0075
TYR 119 0.0062
LEU 120 0.0056
GLY 121 0.0039
GLY 122 0.0038
VAL 123 0.0042
PHE 124 0.0101
GLN 125 0.0159
LEU 126 0.0172
GLU 127 0.0219
LYS 128 0.0217
GLY 129 0.0185
ASP 130 0.0172
ARG 131 0.0126
LEU 132 0.0084
SER 133 0.0096
ALA 134 0.0106
GLU 135 0.0142
ILE 136 0.0155
ASN 137 0.0185
ARG 138 0.0196
PRO 139 0.0211
ASP 140 0.0218
TYR 141 0.0170
LEU 142 0.0173
LEU 143 0.0170
PHE 144 0.0185
ALA 145 0.0187
GLU 146 0.0161
SER 147 0.0109
GLY 148 0.0088
GLN 149 0.0088
VAL 150 0.0099
TYR 151 0.0072
PHE 152 0.0050
GLY 153 0.0011
ILE 154 0.0041
ILE 155 0.0076
ALA 156 0.0123
LEU 157 0.0116
ARG 6 0.1285
THR 7 0.0864
PRO 8 0.0492
SER 9 0.0184
ASP 10 0.0137
LYS 11 0.0080
PRO 12 0.0054
VAL 13 0.0055
ALA 14 0.0070
HIS 15 0.0055
VAL 16 0.0063
VAL 17 0.0061
ALA 18 0.0053
ASN 19 0.0059
PRO 20 0.0051
GLN 21 0.0067
ALA 22 0.0057
GLU 23 0.0056
GLY 24 0.0022
GLN 25 0.0035
LEU 26 0.0046
GLN 27 0.0083
TRP 28 0.0075
LEU 29 0.0076
ASN 30 0.0073
ARG 31 0.0082
ARG 32 0.0068
ALA 33 0.0098
ASN 34 0.0095
ALA 35 0.0061
LEU 36 0.0094
LEU 37 0.0103
ALA 38 0.0105
ASN 39 0.0106
GLY 40 0.0119
VAL 41 0.0109
GLU 42 0.0136
LEU 43 0.0131
ARG 44 0.0172
ASP 45 0.0179
ASN 46 0.0141
GLN 47 0.0132
LEU 48 0.0120
VAL 49 0.0130
VAL 50 0.0103
PRO 51 0.0094
SER 52 0.0068
GLU 53 0.0054
GLY 54 0.0028
LEU 55 0.0030
TYR 56 0.0029
LEU 57 0.0030
ILE 58 0.0046
TYR 59 0.0049
SER 60 0.0052
GLN 61 0.0045
VAL 62 0.0038
LEU 63 0.0058
PHE 64 0.0060
LYS 65 0.0088
GLY 66 0.0187
GLN 67 0.0256
GLY 68 0.0280
CYS 69 0.0249
PRO 70 0.0290
SER 71 0.0316
THR 72 0.0293
HIS 73 0.0226
VAL 74 0.0191
LEU 75 0.0093
LEU 76 0.0061
THR 77 0.0026
HIS 78 0.0039
THR 79 0.0060
ILE 80 0.0078
SER 81 0.0114
ARG 82 0.0121
ILE 83 0.0162
ALA 84 0.0178
VAL 85 0.0215
SER 86 0.0256
TYR 87 0.0283
GLN 88 0.0252
THR 89 0.0257
LYS 90 0.0165
VAL 91 0.0151
ASN 92 0.0123
LEU 93 0.0088
LEU 94 0.0069
SER 95 0.0060
ALA 96 0.0024
ILE 97 0.0018
LYS 98 0.0033
SER 99 0.0100
PRO 100 0.0106
CYS 101 0.0159
GLN 102 0.0214
ARG 103 0.0267
GLU 104 0.0257
THR 105 0.0365
PRO 106 0.0386
GLU 107 0.0525
GLY 108 0.0513
ALA 109 0.0417
GLU 110 0.0524
ALA 111 0.0314
LYS 112 0.0240
PRO 113 0.0216
TRP 114 0.0112
TYR 115 0.0093
GLU 116 0.0052
PRO 117 0.0038
ILE 118 0.0033
TYR 119 0.0039
LEU 120 0.0051
GLY 121 0.0047
GLY 122 0.0046
VAL 123 0.0044
PHE 124 0.0062
GLN 125 0.0066
LEU 126 0.0084
GLU 127 0.0097
LYS 128 0.0108
GLY 129 0.0148
ASP 130 0.0138
ARG 131 0.0142
LEU 132 0.0112
SER 133 0.0106
ALA 134 0.0073
GLU 135 0.0061
ILE 136 0.0019
ASN 137 0.0025
ARG 138 0.0051
PRO 139 0.0062
ASP 140 0.0090
TYR 141 0.0078
LEU 142 0.0065
LEU 143 0.0085
PHE 144 0.0040
ALA 145 0.0055
GLU 146 0.0044
SER 147 0.0046
GLY 148 0.0045
GLN 149 0.0046
VAL 150 0.0037
TYR 151 0.0049
PHE 152 0.0060
GLY 153 0.0057
ILE 154 0.0044
ILE 155 0.0021
ALA 156 0.0023
LEU 157 0.0030
ARG 6 0.0066
THR 7 0.0050
PRO 8 0.0028
SER 9 0.0027
ASP 10 0.0048
LYS 11 0.0047
PRO 12 0.0057
VAL 13 0.0045
ALA 14 0.0066
HIS 15 0.0072
VAL 16 0.0089
VAL 17 0.0101
ALA 18 0.0096
ASN 19 0.0107
PRO 20 0.0105
GLN 21 0.0114
ALA 22 0.0089
GLU 23 0.0070
GLY 24 0.0026
GLN 25 0.0048
LEU 26 0.0069
GLN 27 0.0108
TRP 28 0.0108
LEU 29 0.0123
ASN 30 0.0123
ARG 31 0.0132
ARG 32 0.0130
ALA 33 0.0120
ASN 34 0.0100
ALA 35 0.0101
LEU 36 0.0076
LEU 37 0.0086
ALA 38 0.0073
ASN 39 0.0074
GLY 40 0.0088
VAL 41 0.0088
GLU 42 0.0103
LEU 43 0.0115
ARG 44 0.0142
ASP 45 0.0138
ASN 46 0.0123
GLN 47 0.0102
LEU 48 0.0095
VAL 49 0.0106
VAL 50 0.0090
PRO 51 0.0106
SER 52 0.0109
GLU 53 0.0127
GLY 54 0.0114
LEU 55 0.0092
TYR 56 0.0060
LEU 57 0.0017
ILE 58 0.0033
TYR 59 0.0044
SER 60 0.0052
GLN 61 0.0047
VAL 62 0.0044
LEU 63 0.0028
PHE 64 0.0047
LYS 65 0.0065
GLY 66 0.0147
GLN 67 0.0223
GLY 68 0.0256
CYS 69 0.0266
PRO 70 0.0320
SER 71 0.0336
THR 72 0.0295
HIS 73 0.0213
VAL 74 0.0177
LEU 75 0.0111
LEU 76 0.0084
THR 77 0.0079
HIS 78 0.0055
THR 79 0.0050
ILE 80 0.0044
SER 81 0.0075
ARG 82 0.0076
ILE 83 0.0123
ALA 84 0.0154
VAL 85 0.0210
SER 86 0.0252
TYR 87 0.0258
GLN 88 0.0232
THR 89 0.0203
LYS 90 0.0118
VAL 91 0.0085
ASN 92 0.0061
LEU 93 0.0042
LEU 94 0.0052
SER 95 0.0076
ALA 96 0.0082
ILE 97 0.0082
LYS 98 0.0060
SER 99 0.0079
PRO 100 0.0073
CYS 101 0.0117
GLN 102 0.0120
ARG 103 0.0199
GLU 104 0.0255
THR 105 0.0329
PRO 106 0.0432
GLU 107 0.0662
GLY 108 0.0679
ALA 109 0.0601
GLU 110 0.0538
ALA 111 0.0336
LYS 112 0.0280
PRO 113 0.0186
TRP 114 0.0107
TYR 115 0.0066
GLU 116 0.0035
PRO 117 0.0023
ILE 118 0.0040
TYR 119 0.0046
LEU 120 0.0048
GLY 121 0.0037
GLY 122 0.0029
VAL 123 0.0035
PHE 124 0.0066
GLN 125 0.0101
LEU 126 0.0105
GLU 127 0.0132
LYS 128 0.0138
GLY 129 0.0133
ASP 130 0.0122
ARG 131 0.0117
LEU 132 0.0066
SER 133 0.0079
ALA 134 0.0079
GLU 135 0.0043
ILE 136 0.0037
ASN 137 0.0053
ARG 138 0.0087
PRO 139 0.0060
ASP 140 0.0079
TYR 141 0.0089
LEU 142 0.0048
LEU 143 0.0042
PHE 144 0.0071
ALA 145 0.0097
GLU 146 0.0101
SER 147 0.0098
GLY 148 0.0086
GLN 149 0.0059
VAL 150 0.0073
TYR 151 0.0067
PHE 152 0.0059
GLY 153 0.0054
ILE 154 0.0040
ILE 155 0.0027
ALA 156 0.0062
LEU 157 0.0073

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** LYMPHOKINE 25-AUG-89 1TNF ***

<R2> analysis for 2406080142331607873

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873