Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873

--- normal mode 57 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.0937
ARG 6 0.0125
THR 7 0.0119
PRO 8 0.0132
SER 9 0.0229
ASP 10 0.0235
LYS 11 0.0160
PRO 12 0.0093
VAL 13 0.0055
ALA 14 0.0034
HIS 15 0.0015
VAL 16 0.0041
VAL 17 0.0066
ALA 18 0.0103
ASN 19 0.0077
PRO 20 0.0047
GLN 21 0.0260
ALA 22 0.0068
GLU 23 0.0264
GLY 24 0.0142
GLN 25 0.0101
LEU 26 0.0068
GLN 27 0.0066
TRP 28 0.0065
LEU 29 0.0068
ASN 30 0.0079
ARG 31 0.0112
ARG 32 0.0106
ALA 33 0.0066
ASN 34 0.0011
ALA 35 0.0042
LEU 36 0.0037
LEU 37 0.0066
ALA 38 0.0091
ASN 39 0.0121
GLY 40 0.0126
VAL 41 0.0097
GLU 42 0.0116
LEU 43 0.0081
ARG 44 0.0105
ASP 45 0.0094
ASN 46 0.0078
GLN 47 0.0032
LEU 48 0.0031
VAL 49 0.0030
VAL 50 0.0020
PRO 51 0.0055
SER 52 0.0061
GLU 53 0.0065
GLY 54 0.0153
LEU 55 0.0137
TYR 56 0.0064
LEU 57 0.0016
ILE 58 0.0029
TYR 59 0.0041
SER 60 0.0029
GLN 61 0.0023
VAL 62 0.0046
LEU 63 0.0081
PHE 64 0.0110
LYS 65 0.0140
GLY 66 0.0115
GLN 67 0.0098
GLY 68 0.0051
CYS 69 0.0071
PRO 70 0.0097
SER 71 0.0135
THR 72 0.0115
HIS 73 0.0073
VAL 74 0.0113
LEU 75 0.0103
LEU 76 0.0093
THR 77 0.0089
HIS 78 0.0028
THR 79 0.0035
ILE 80 0.0041
SER 81 0.0089
ARG 82 0.0065
ILE 83 0.0133
ALA 84 0.0130
VAL 85 0.0256
SER 86 0.0273
TYR 87 0.0098
GLN 88 0.0315
THR 89 0.0396
LYS 90 0.0160
VAL 91 0.0141
ASN 92 0.0138
LEU 93 0.0061
LEU 94 0.0048
SER 95 0.0063
ALA 96 0.0071
ILE 97 0.0057
LYS 98 0.0030
SER 99 0.0043
PRO 100 0.0062
CYS 101 0.0053
GLN 102 0.0085
ARG 103 0.0101
GLU 104 0.0111
THR 105 0.0107
PRO 106 0.0082
GLU 107 0.0097
GLY 108 0.0124
ALA 109 0.0074
GLU 110 0.0068
ALA 111 0.0083
LYS 112 0.0062
PRO 113 0.0062
TRP 114 0.0064
TYR 115 0.0049
GLU 116 0.0039
PRO 117 0.0028
ILE 118 0.0030
TYR 119 0.0031
LEU 120 0.0051
GLY 121 0.0061
GLY 122 0.0069
VAL 123 0.0041
PHE 124 0.0088
GLN 125 0.0129
LEU 126 0.0043
GLU 127 0.0071
LYS 128 0.0101
GLY 129 0.0096
ASP 130 0.0072
ARG 131 0.0088
LEU 132 0.0053
SER 133 0.0042
ALA 134 0.0022
GLU 135 0.0053
ILE 136 0.0092
ASN 137 0.0145
ARG 138 0.0181
PRO 139 0.0147
ASP 140 0.0201
TYR 141 0.0164
LEU 142 0.0144
LEU 143 0.0146
PHE 144 0.0148
ALA 145 0.0183
GLU 146 0.0144
SER 147 0.0101
GLY 148 0.0088
GLN 149 0.0064
VAL 150 0.0053
TYR 151 0.0031
PHE 152 0.0014
GLY 153 0.0019
ILE 154 0.0007
ILE 155 0.0027
ALA 156 0.0081
LEU 157 0.0116
ARG 6 0.0937
THR 7 0.0310
PRO 8 0.0628
SER 9 0.0781
ASP 10 0.0769
LYS 11 0.0383
PRO 12 0.0141
VAL 13 0.0108
ALA 14 0.0105
HIS 15 0.0091
VAL 16 0.0134
VAL 17 0.0201
ALA 18 0.0228
ASN 19 0.0152
PRO 20 0.0102
GLN 21 0.0383
ALA 22 0.0181
GLU 23 0.0304
GLY 24 0.0257
GLN 25 0.0151
LEU 26 0.0147
GLN 27 0.0189
TRP 28 0.0128
LEU 29 0.0121
ASN 30 0.0285
ARG 31 0.0456
ARG 32 0.0430
ALA 33 0.0502
ASN 34 0.0267
ALA 35 0.0275
LEU 36 0.0246
LEU 37 0.0239
ALA 38 0.0288
ASN 39 0.0321
GLY 40 0.0123
VAL 41 0.0131
GLU 42 0.0386
LEU 43 0.0205
ARG 44 0.0450
ASP 45 0.0515
ASN 46 0.0284
GLN 47 0.0178
LEU 48 0.0150
VAL 49 0.0173
VAL 50 0.0171
PRO 51 0.0181
SER 52 0.0181
GLU 53 0.0157
GLY 54 0.0104
LEU 55 0.0105
TYR 56 0.0107
LEU 57 0.0062
ILE 58 0.0073
TYR 59 0.0086
SER 60 0.0104
GLN 61 0.0097
VAL 62 0.0087
LEU 63 0.0063
PHE 64 0.0024
LYS 65 0.0058
GLY 66 0.0170
GLN 67 0.0231
GLY 68 0.0201
CYS 69 0.0161
PRO 70 0.0363
SER 71 0.0482
THR 72 0.0328
HIS 73 0.0203
VAL 74 0.0137
LEU 75 0.0061
LEU 76 0.0040
THR 77 0.0060
HIS 78 0.0065
THR 79 0.0067
ILE 80 0.0068
SER 81 0.0042
ARG 82 0.0092
ILE 83 0.0115
ALA 84 0.0209
VAL 85 0.0369
SER 86 0.0586
TYR 87 0.0197
GLN 88 0.0373
THR 89 0.0443
LYS 90 0.0121
VAL 91 0.0106
ASN 92 0.0071
LEU 93 0.0028
LEU 94 0.0019
SER 95 0.0016
ALA 96 0.0058
ILE 97 0.0053
LYS 98 0.0049
SER 99 0.0039
PRO 100 0.0041
CYS 101 0.0013
GLN 102 0.0065
ARG 103 0.0112
GLU 104 0.0057
THR 105 0.0155
PRO 106 0.0092
GLU 107 0.0104
GLY 108 0.0351
ALA 109 0.0168
GLU 110 0.0242
ALA 111 0.0165
LYS 112 0.0153
PRO 113 0.0130
TRP 114 0.0065
TYR 115 0.0055
GLU 116 0.0037
PRO 117 0.0065
ILE 118 0.0067
TYR 119 0.0070
LEU 120 0.0051
GLY 121 0.0031
GLY 122 0.0035
VAL 123 0.0065
PHE 124 0.0068
GLN 125 0.0085
LEU 126 0.0138
GLU 127 0.0184
LYS 128 0.0203
GLY 129 0.0234
ASP 130 0.0147
ARG 131 0.0138
LEU 132 0.0114
SER 133 0.0129
ALA 134 0.0149
GLU 135 0.0062
ILE 136 0.0057
ASN 137 0.0092
ARG 138 0.0124
PRO 139 0.0112
ASP 140 0.0142
TYR 141 0.0070
LEU 142 0.0042
LEU 143 0.0087
PHE 144 0.0052
ALA 145 0.0109
GLU 146 0.0132
SER 147 0.0112
GLY 148 0.0105
GLN 149 0.0093
VAL 150 0.0135
TYR 151 0.0121
PHE 152 0.0112
GLY 153 0.0095
ILE 154 0.0062
ILE 155 0.0031
ALA 156 0.0124
LEU 157 0.0152
ARG 6 0.0148
THR 7 0.0148
PRO 8 0.0148
SER 9 0.0152
ASP 10 0.0144
LYS 11 0.0123
PRO 12 0.0109
VAL 13 0.0100
ALA 14 0.0078
HIS 15 0.0056
VAL 16 0.0043
VAL 17 0.0060
ALA 18 0.0054
ASN 19 0.0077
PRO 20 0.0096
GLN 21 0.0132
ALA 22 0.0095
GLU 23 0.0057
GLY 24 0.0062
GLN 25 0.0039
LEU 26 0.0029
GLN 27 0.0059
TRP 28 0.0052
LEU 29 0.0079
ASN 30 0.0037
ARG 31 0.0061
ARG 32 0.0089
ALA 33 0.0067
ASN 34 0.0071
ALA 35 0.0065
LEU 36 0.0083
LEU 37 0.0065
ALA 38 0.0096
ASN 39 0.0127
GLY 40 0.0128
VAL 41 0.0094
GLU 42 0.0081
LEU 43 0.0055
ARG 44 0.0162
ASP 45 0.0113
ASN 46 0.0074
GLN 47 0.0044
LEU 48 0.0029
VAL 49 0.0063
VAL 50 0.0082
PRO 51 0.0111
SER 52 0.0114
GLU 53 0.0071
GLY 54 0.0081
LEU 55 0.0080
TYR 56 0.0077
LEU 57 0.0058
ILE 58 0.0050
TYR 59 0.0051
SER 60 0.0027
GLN 61 0.0034
VAL 62 0.0044
LEU 63 0.0069
PHE 64 0.0071
LYS 65 0.0078
GLY 66 0.0102
GLN 67 0.0091
GLY 68 0.0119
CYS 69 0.0178
PRO 70 0.0209
SER 71 0.0256
THR 72 0.0160
HIS 73 0.0130
VAL 74 0.0101
LEU 75 0.0067
LEU 76 0.0064
THR 77 0.0050
HIS 78 0.0041
THR 79 0.0030
ILE 80 0.0021
SER 81 0.0033
ARG 82 0.0058
ILE 83 0.0075
ALA 84 0.0106
VAL 85 0.0049
SER 86 0.0089
TYR 87 0.0123
GLN 88 0.0083
THR 89 0.0164
LYS 90 0.0080
VAL 91 0.0070
ASN 92 0.0043
LEU 93 0.0019
LEU 94 0.0023
SER 95 0.0028
ALA 96 0.0054
ILE 97 0.0054
LYS 98 0.0055
SER 99 0.0075
PRO 100 0.0124
CYS 101 0.0165
GLN 102 0.0082
ARG 103 0.0136
GLU 104 0.0141
THR 105 0.0198
PRO 106 0.0115
GLU 107 0.0105
GLY 108 0.0079
ALA 109 0.0102
GLU 110 0.0104
ALA 111 0.0101
LYS 112 0.0091
PRO 113 0.0078
TRP 114 0.0092
TYR 115 0.0080
GLU 116 0.0086
PRO 117 0.0045
ILE 118 0.0041
TYR 119 0.0042
LEU 120 0.0024
GLY 121 0.0036
GLY 122 0.0039
VAL 123 0.0048
PHE 124 0.0056
GLN 125 0.0059
LEU 126 0.0065
GLU 127 0.0058
LYS 128 0.0078
GLY 129 0.0096
ASP 130 0.0080
ARG 131 0.0069
LEU 132 0.0039
SER 133 0.0021
ALA 134 0.0016
GLU 135 0.0029
ILE 136 0.0053
ASN 137 0.0068
ARG 138 0.0086
PRO 139 0.0082
ASP 140 0.0111
TYR 141 0.0084
LEU 142 0.0071
LEU 143 0.0071
PHE 144 0.0078
ALA 145 0.0090
GLU 146 0.0082
SER 147 0.0056
GLY 148 0.0055
GLN 149 0.0056
VAL 150 0.0048
TYR 151 0.0036
PHE 152 0.0032
GLY 153 0.0065
ILE 154 0.0069
ILE 155 0.0078
ALA 156 0.0098
LEU 157 0.0079

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** LYMPHOKINE 25-AUG-89 1TNF ***

<R2> analysis for 2406080142331607873

--- normal mode 57 ---

Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873