Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873

--- normal mode 53 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.0558
ARG 6 0.0137
THR 7 0.0096
PRO 8 0.0075
SER 9 0.0046
ASP 10 0.0034
LYS 11 0.0016
PRO 12 0.0025
VAL 13 0.0023
ALA 14 0.0029
HIS 15 0.0029
VAL 16 0.0036
VAL 17 0.0027
ALA 18 0.0061
ASN 19 0.0075
PRO 20 0.0158
GLN 21 0.0558
ALA 22 0.0159
GLU 23 0.0436
GLY 24 0.0137
GLN 25 0.0088
LEU 26 0.0045
GLN 27 0.0018
TRP 28 0.0030
LEU 29 0.0042
ASN 30 0.0083
ARG 31 0.0104
ARG 32 0.0086
ALA 33 0.0047
ASN 34 0.0039
ALA 35 0.0053
LEU 36 0.0037
LEU 37 0.0055
ALA 38 0.0032
ASN 39 0.0033
GLY 40 0.0036
VAL 41 0.0044
GLU 42 0.0110
LEU 43 0.0097
ARG 44 0.0159
ASP 45 0.0159
ASN 46 0.0104
GLN 47 0.0089
LEU 48 0.0070
VAL 49 0.0064
VAL 50 0.0042
PRO 51 0.0019
SER 52 0.0020
GLU 53 0.0020
GLY 54 0.0006
LEU 55 0.0006
TYR 56 0.0016
LEU 57 0.0014
ILE 58 0.0006
TYR 59 0.0006
SER 60 0.0007
GLN 61 0.0021
VAL 62 0.0021
LEU 63 0.0039
PHE 64 0.0035
LYS 65 0.0040
GLY 66 0.0094
GLN 67 0.0114
GLY 68 0.0086
CYS 69 0.0147
PRO 70 0.0190
SER 71 0.0243
THR 72 0.0187
HIS 73 0.0164
VAL 74 0.0140
LEU 75 0.0085
LEU 76 0.0067
THR 77 0.0053
HIS 78 0.0010
THR 79 0.0021
ILE 80 0.0029
SER 81 0.0081
ARG 82 0.0070
ILE 83 0.0051
ALA 84 0.0117
VAL 85 0.0153
SER 86 0.0280
TYR 87 0.0241
GLN 88 0.0204
THR 89 0.0180
LYS 90 0.0079
VAL 91 0.0089
ASN 92 0.0094
LEU 93 0.0024
LEU 94 0.0025
SER 95 0.0031
ALA 96 0.0042
ILE 97 0.0048
LYS 98 0.0053
SER 99 0.0088
PRO 100 0.0123
CYS 101 0.0162
GLN 102 0.0140
ARG 103 0.0151
GLU 104 0.0149
THR 105 0.0284
PRO 106 0.0107
GLU 107 0.0266
GLY 108 0.0267
ALA 109 0.0438
GLU 110 0.0381
ALA 111 0.0208
LYS 112 0.0189
PRO 113 0.0159
TRP 114 0.0079
TYR 115 0.0081
GLU 116 0.0089
PRO 117 0.0061
ILE 118 0.0045
TYR 119 0.0034
LEU 120 0.0021
GLY 121 0.0017
GLY 122 0.0017
VAL 123 0.0021
PHE 124 0.0014
GLN 125 0.0006
LEU 126 0.0044
GLU 127 0.0029
LYS 128 0.0021
GLY 129 0.0008
ASP 130 0.0034
ARG 131 0.0053
LEU 132 0.0064
SER 133 0.0065
ALA 134 0.0051
GLU 135 0.0051
ILE 136 0.0025
ASN 137 0.0049
ARG 138 0.0025
PRO 139 0.0041
ASP 140 0.0030
TYR 141 0.0016
LEU 142 0.0003
LEU 143 0.0012
PHE 144 0.0033
ALA 145 0.0020
GLU 146 0.0046
SER 147 0.0035
GLY 148 0.0037
GLN 149 0.0034
VAL 150 0.0013
TYR 151 0.0010
PHE 152 0.0017
GLY 153 0.0018
ILE 154 0.0018
ILE 155 0.0014
ALA 156 0.0022
LEU 157 0.0033
ARG 6 0.0214
THR 7 0.0108
PRO 8 0.0130
SER 9 0.0197
ASP 10 0.0195
LYS 11 0.0097
PRO 12 0.0024
VAL 13 0.0037
ALA 14 0.0038
HIS 15 0.0062
VAL 16 0.0081
VAL 17 0.0072
ALA 18 0.0115
ASN 19 0.0113
PRO 20 0.0082
GLN 21 0.0136
ALA 22 0.0119
GLU 23 0.0106
GLY 24 0.0091
GLN 25 0.0108
LEU 26 0.0103
GLN 27 0.0135
TRP 28 0.0129
LEU 29 0.0124
ASN 30 0.0126
ARG 31 0.0232
ARG 32 0.0137
ALA 33 0.0180
ASN 34 0.0090
ALA 35 0.0012
LEU 36 0.0060
LEU 37 0.0081
ALA 38 0.0101
ASN 39 0.0106
GLY 40 0.0103
VAL 41 0.0072
GLU 42 0.0193
LEU 43 0.0156
ARG 44 0.0305
ASP 45 0.0187
ASN 46 0.0049
GLN 47 0.0051
LEU 48 0.0030
VAL 49 0.0094
VAL 50 0.0104
PRO 51 0.0103
SER 52 0.0100
GLU 53 0.0123
GLY 54 0.0133
LEU 55 0.0136
TYR 56 0.0138
LEU 57 0.0060
ILE 58 0.0048
TYR 59 0.0036
SER 60 0.0053
GLN 61 0.0048
VAL 62 0.0054
LEU 63 0.0061
PHE 64 0.0057
LYS 65 0.0062
GLY 66 0.0094
GLN 67 0.0080
GLY 68 0.0112
CYS 69 0.0151
PRO 70 0.0208
SER 71 0.0286
THR 72 0.0165
HIS 73 0.0143
VAL 74 0.0125
LEU 75 0.0101
LEU 76 0.0074
THR 77 0.0064
HIS 78 0.0042
THR 79 0.0049
ILE 80 0.0062
SER 81 0.0133
ARG 82 0.0109
ILE 83 0.0128
ALA 84 0.0129
VAL 85 0.0285
SER 86 0.0352
TYR 87 0.0233
GLN 88 0.0244
THR 89 0.0192
LYS 90 0.0132
VAL 91 0.0112
ASN 92 0.0106
LEU 93 0.0041
LEU 94 0.0035
SER 95 0.0028
ALA 96 0.0063
ILE 97 0.0071
LYS 98 0.0074
SER 99 0.0098
PRO 100 0.0116
CYS 101 0.0112
GLN 102 0.0072
ARG 103 0.0122
GLU 104 0.0196
THR 105 0.0284
PRO 106 0.0174
GLU 107 0.0183
GLY 108 0.0207
ALA 109 0.0149
GLU 110 0.0130
ALA 111 0.0110
LYS 112 0.0111
PRO 113 0.0082
TRP 114 0.0046
TYR 115 0.0044
GLU 116 0.0046
PRO 117 0.0037
ILE 118 0.0032
TYR 119 0.0032
LEU 120 0.0024
GLY 121 0.0021
GLY 122 0.0019
VAL 123 0.0075
PHE 124 0.0084
GLN 125 0.0110
LEU 126 0.0106
GLU 127 0.0095
LYS 128 0.0099
GLY 129 0.0111
ASP 130 0.0137
ARG 131 0.0133
LEU 132 0.0095
SER 133 0.0085
ALA 134 0.0102
GLU 135 0.0056
ILE 136 0.0033
ASN 137 0.0048
ARG 138 0.0082
PRO 139 0.0093
ASP 140 0.0102
TYR 141 0.0080
LEU 142 0.0078
LEU 143 0.0088
PHE 144 0.0068
ALA 145 0.0077
GLU 146 0.0069
SER 147 0.0043
GLY 148 0.0044
GLN 149 0.0056
VAL 150 0.0064
TYR 151 0.0058
PHE 152 0.0059
GLY 153 0.0049
ILE 154 0.0043
ILE 155 0.0044
ALA 156 0.0116
LEU 157 0.0118
ARG 6 0.0140
THR 7 0.0178
PRO 8 0.0207
SER 9 0.0228
ASP 10 0.0229
LYS 11 0.0196
PRO 12 0.0155
VAL 13 0.0129
ALA 14 0.0117
HIS 15 0.0112
VAL 16 0.0181
VAL 17 0.0182
ALA 18 0.0234
ASN 19 0.0250
PRO 20 0.0205
GLN 21 0.0355
ALA 22 0.0104
GLU 23 0.0267
GLY 24 0.0220
GLN 25 0.0158
LEU 26 0.0143
GLN 27 0.0304
TRP 28 0.0309
LEU 29 0.0343
ASN 30 0.0482
ARG 31 0.0522
ARG 32 0.0434
ALA 33 0.0296
ASN 34 0.0162
ALA 35 0.0149
LEU 36 0.0100
LEU 37 0.0146
ALA 38 0.0143
ASN 39 0.0205
GLY 40 0.0183
VAL 41 0.0149
GLU 42 0.0205
LEU 43 0.0203
ARG 44 0.0234
ASP 45 0.0143
ASN 46 0.0088
GLN 47 0.0097
LEU 48 0.0058
VAL 49 0.0091
VAL 50 0.0070
PRO 51 0.0160
SER 52 0.0131
GLU 53 0.0120
GLY 54 0.0068
LEU 55 0.0044
TYR 56 0.0028
LEU 57 0.0029
ILE 58 0.0034
TYR 59 0.0056
SER 60 0.0087
GLN 61 0.0075
VAL 62 0.0077
LEU 63 0.0095
PHE 64 0.0059
LYS 65 0.0097
GLY 66 0.0123
GLN 67 0.0149
GLY 68 0.0067
CYS 69 0.0172
PRO 70 0.0313
SER 71 0.0471
THR 72 0.0421
HIS 73 0.0308
VAL 74 0.0160
LEU 75 0.0124
LEU 76 0.0093
THR 77 0.0097
HIS 78 0.0078
THR 79 0.0078
ILE 80 0.0073
SER 81 0.0108
ARG 82 0.0132
ILE 83 0.0127
ALA 84 0.0224
VAL 85 0.0223
SER 86 0.0192
TYR 87 0.0286
GLN 88 0.0213
THR 89 0.0202
LYS 90 0.0122
VAL 91 0.0101
ASN 92 0.0081
LEU 93 0.0059
LEU 94 0.0053
SER 95 0.0052
ALA 96 0.0093
ILE 97 0.0109
LYS 98 0.0118
SER 99 0.0177
PRO 100 0.0164
CYS 101 0.0235
GLN 102 0.0174
ARG 103 0.0317
GLU 104 0.0297
THR 105 0.0296
PRO 106 0.0145
GLU 107 0.0209
GLY 108 0.0271
ALA 109 0.0259
GLU 110 0.0210
ALA 111 0.0126
LYS 112 0.0132
PRO 113 0.0176
TRP 114 0.0113
TYR 115 0.0129
GLU 116 0.0115
PRO 117 0.0095
ILE 118 0.0074
TYR 119 0.0062
LEU 120 0.0065
GLY 121 0.0056
GLY 122 0.0045
VAL 123 0.0040
PHE 124 0.0053
GLN 125 0.0093
LEU 126 0.0122
GLU 127 0.0169
LYS 128 0.0201
GLY 129 0.0136
ASP 130 0.0138
ARG 131 0.0140
LEU 132 0.0073
SER 133 0.0084
ALA 134 0.0126
GLU 135 0.0097
ILE 136 0.0088
ASN 137 0.0137
ARG 138 0.0130
PRO 139 0.0129
ASP 140 0.0177
TYR 141 0.0101
LEU 142 0.0101
LEU 143 0.0127
PHE 144 0.0152
ALA 145 0.0223
GLU 146 0.0209
SER 147 0.0114
GLY 148 0.0078
GLN 149 0.0067
VAL 150 0.0080
TYR 151 0.0092
PHE 152 0.0112
GLY 153 0.0088
ILE 154 0.0066
ILE 155 0.0078
ALA 156 0.0065
LEU 157 0.0048

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** LYMPHOKINE 25-AUG-89 1TNF ***

<R2> analysis for 2406080142331607873

--- normal mode 53 ---

Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873