Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873

--- normal mode 34 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.0837
ARG 6 0.0137
THR 7 0.0142
PRO 8 0.0150
SER 9 0.0169
ASP 10 0.0172
LYS 11 0.0120
PRO 12 0.0083
VAL 13 0.0053
ALA 14 0.0041
HIS 15 0.0018
VAL 16 0.0035
VAL 17 0.0058
ALA 18 0.0070
ASN 19 0.0050
PRO 20 0.0019
GLN 21 0.0103
ALA 22 0.0110
GLU 23 0.0183
GLY 24 0.0047
GLN 25 0.0067
LEU 26 0.0073
GLN 27 0.0062
TRP 28 0.0067
LEU 29 0.0066
ASN 30 0.0045
ARG 31 0.0045
ARG 32 0.0048
ALA 33 0.0043
ASN 34 0.0025
ALA 35 0.0013
LEU 36 0.0020
LEU 37 0.0060
ALA 38 0.0080
ASN 39 0.0114
GLY 40 0.0152
VAL 41 0.0122
GLU 42 0.0150
LEU 43 0.0116
ARG 44 0.0167
ASP 45 0.0143
ASN 46 0.0108
GLN 47 0.0055
LEU 48 0.0068
VAL 49 0.0088
VAL 50 0.0092
PRO 51 0.0078
SER 52 0.0104
GLU 53 0.0122
GLY 54 0.0064
LEU 55 0.0042
TYR 56 0.0050
LEU 57 0.0039
ILE 58 0.0038
TYR 59 0.0039
SER 60 0.0060
GLN 61 0.0059
VAL 62 0.0060
LEU 63 0.0063
PHE 64 0.0061
LYS 65 0.0058
GLY 66 0.0040
GLN 67 0.0026
GLY 68 0.0054
CYS 69 0.0088
PRO 70 0.0132
SER 71 0.0180
THR 72 0.0122
HIS 73 0.0114
VAL 74 0.0110
LEU 75 0.0072
LEU 76 0.0075
THR 77 0.0079
HIS 78 0.0074
THR 79 0.0066
ILE 80 0.0063
SER 81 0.0046
ARG 82 0.0028
ILE 83 0.0057
ALA 84 0.0115
VAL 85 0.0180
SER 86 0.0221
TYR 87 0.0187
GLN 88 0.0176
THR 89 0.0125
LYS 90 0.0039
VAL 91 0.0046
ASN 92 0.0057
LEU 93 0.0060
LEU 94 0.0072
SER 95 0.0068
ALA 96 0.0071
ILE 97 0.0060
LYS 98 0.0058
SER 99 0.0069
PRO 100 0.0069
CYS 101 0.0059
GLN 102 0.0090
ARG 103 0.0086
GLU 104 0.0073
THR 105 0.0193
PRO 106 0.0173
GLU 107 0.0297
GLY 108 0.0381
ALA 109 0.0275
GLU 110 0.0182
ALA 111 0.0085
LYS 112 0.0041
PRO 113 0.0050
TRP 114 0.0043
TYR 115 0.0049
GLU 116 0.0059
PRO 117 0.0055
ILE 118 0.0051
TYR 119 0.0058
LEU 120 0.0075
GLY 121 0.0076
GLY 122 0.0078
VAL 123 0.0051
PHE 124 0.0027
GLN 125 0.0043
LEU 126 0.0072
GLU 127 0.0112
LYS 128 0.0129
GLY 129 0.0141
ASP 130 0.0096
ARG 131 0.0063
LEU 132 0.0022
SER 133 0.0046
ALA 134 0.0067
GLU 135 0.0074
ILE 136 0.0073
ASN 137 0.0069
ARG 138 0.0083
PRO 139 0.0084
ASP 140 0.0077
TYR 141 0.0072
LEU 142 0.0073
LEU 143 0.0064
PHE 144 0.0063
ALA 145 0.0073
GLU 146 0.0065
SER 147 0.0056
GLY 148 0.0058
GLN 149 0.0057
VAL 150 0.0062
TYR 151 0.0050
PHE 152 0.0039
GLY 153 0.0030
ILE 154 0.0022
ILE 155 0.0031
ALA 156 0.0049
LEU 157 0.0066
ARG 6 0.0551
THR 7 0.0241
PRO 8 0.0223
SER 9 0.0336
ASP 10 0.0393
LYS 11 0.0290
PRO 12 0.0150
VAL 13 0.0080
ALA 14 0.0034
HIS 15 0.0120
VAL 16 0.0116
VAL 17 0.0109
ALA 18 0.0154
ASN 19 0.0239
PRO 20 0.0254
GLN 21 0.0569
ALA 22 0.0491
GLU 23 0.0630
GLY 24 0.0292
GLN 25 0.0233
LEU 26 0.0195
GLN 27 0.0196
TRP 28 0.0196
LEU 29 0.0220
ASN 30 0.0106
ARG 31 0.0137
ARG 32 0.0146
ALA 33 0.0075
ASN 34 0.0074
ALA 35 0.0095
LEU 36 0.0065
LEU 37 0.0075
ALA 38 0.0145
ASN 39 0.0277
GLY 40 0.0244
VAL 41 0.0148
GLU 42 0.0204
LEU 43 0.0136
ARG 44 0.0270
ASP 45 0.0300
ASN 46 0.0207
GLN 47 0.0143
LEU 48 0.0093
VAL 49 0.0105
VAL 50 0.0089
PRO 51 0.0170
SER 52 0.0185
GLU 53 0.0170
GLY 54 0.0135
LEU 55 0.0131
TYR 56 0.0102
LEU 57 0.0072
ILE 58 0.0066
TYR 59 0.0102
SER 60 0.0117
GLN 61 0.0100
VAL 62 0.0088
LEU 63 0.0085
PHE 64 0.0084
LYS 65 0.0089
GLY 66 0.0106
GLN 67 0.0084
GLY 68 0.0080
CYS 69 0.0159
PRO 70 0.0250
SER 71 0.0341
THR 72 0.0198
HIS 73 0.0152
VAL 74 0.0093
LEU 75 0.0068
LEU 76 0.0051
THR 77 0.0053
HIS 78 0.0091
THR 79 0.0101
ILE 80 0.0117
SER 81 0.0144
ARG 82 0.0064
ILE 83 0.0070
ALA 84 0.0078
VAL 85 0.0285
SER 86 0.0412
TYR 87 0.0271
GLN 88 0.0187
THR 89 0.0090
LYS 90 0.0095
VAL 91 0.0092
ASN 92 0.0135
LEU 93 0.0082
LEU 94 0.0078
SER 95 0.0079
ALA 96 0.0049
ILE 97 0.0016
LYS 98 0.0025
SER 99 0.0057
PRO 100 0.0062
CYS 101 0.0129
GLN 102 0.0206
ARG 103 0.0352
GLU 104 0.0283
THR 105 0.0362
PRO 106 0.0084
GLU 107 0.0287
GLY 108 0.0292
ALA 109 0.0207
GLU 110 0.0042
ALA 111 0.0028
LYS 112 0.0042
PRO 113 0.0048
TRP 114 0.0033
TYR 115 0.0037
GLU 116 0.0037
PRO 117 0.0053
ILE 118 0.0059
TYR 119 0.0070
LEU 120 0.0082
GLY 121 0.0065
GLY 122 0.0048
VAL 123 0.0068
PHE 124 0.0084
GLN 125 0.0116
LEU 126 0.0104
GLU 127 0.0135
LYS 128 0.0164
GLY 129 0.0167
ASP 130 0.0069
ARG 131 0.0094
LEU 132 0.0099
SER 133 0.0138
ALA 134 0.0158
GLU 135 0.0127
ILE 136 0.0097
ASN 137 0.0103
ARG 138 0.0180
PRO 139 0.0200
ASP 140 0.0244
TYR 141 0.0150
LEU 142 0.0142
LEU 143 0.0141
PHE 144 0.0148
ALA 145 0.0156
GLU 146 0.0083
SER 147 0.0083
GLY 148 0.0086
GLN 149 0.0074
VAL 150 0.0100
TYR 151 0.0112
PHE 152 0.0122
GLY 153 0.0070
ILE 154 0.0041
ILE 155 0.0079
ALA 156 0.0126
LEU 157 0.0137
ARG 6 0.0208
THR 7 0.0219
PRO 8 0.0224
SER 9 0.0176
ASP 10 0.0162
LYS 11 0.0103
PRO 12 0.0046
VAL 13 0.0053
ALA 14 0.0058
HIS 15 0.0041
VAL 16 0.0055
VAL 17 0.0061
ALA 18 0.0072
ASN 19 0.0106
PRO 20 0.0136
GLN 21 0.0186
ALA 22 0.0174
GLU 23 0.0216
GLY 24 0.0116
GLN 25 0.0077
LEU 26 0.0034
GLN 27 0.0084
TRP 28 0.0056
LEU 29 0.0075
ASN 30 0.0113
ARG 31 0.0115
ARG 32 0.0077
ALA 33 0.0113
ASN 34 0.0101
ALA 35 0.0095
LEU 36 0.0119
LEU 37 0.0116
ALA 38 0.0119
ASN 39 0.0102
GLY 40 0.0042
VAL 41 0.0055
GLU 42 0.0069
LEU 43 0.0076
ARG 44 0.0131
ASP 45 0.0127
ASN 46 0.0089
GLN 47 0.0072
LEU 48 0.0087
VAL 49 0.0106
VAL 50 0.0096
PRO 51 0.0114
SER 52 0.0133
GLU 53 0.0160
GLY 54 0.0119
LEU 55 0.0106
TYR 56 0.0084
LEU 57 0.0058
ILE 58 0.0050
TYR 59 0.0040
SER 60 0.0051
GLN 61 0.0045
VAL 62 0.0043
LEU 63 0.0047
PHE 64 0.0046
LYS 65 0.0050
GLY 66 0.0032
GLN 67 0.0090
GLY 68 0.0060
CYS 69 0.0088
PRO 70 0.0137
SER 71 0.0167
THR 72 0.0108
HIS 73 0.0092
VAL 74 0.0077
LEU 75 0.0080
LEU 76 0.0066
THR 77 0.0062
HIS 78 0.0058
THR 79 0.0063
ILE 80 0.0068
SER 81 0.0098
ARG 82 0.0116
ILE 83 0.0124
ALA 84 0.0127
VAL 85 0.0283
SER 86 0.0224
TYR 87 0.0334
GLN 88 0.0217
THR 89 0.0424
LYS 90 0.0099
VAL 91 0.0090
ASN 92 0.0076
LEU 93 0.0059
LEU 94 0.0059
SER 95 0.0067
ALA 96 0.0051
ILE 97 0.0059
LYS 98 0.0055
SER 99 0.0085
PRO 100 0.0083
CYS 101 0.0102
GLN 102 0.0087
ARG 103 0.0128
GLU 104 0.0146
THR 105 0.0192
PRO 106 0.0194
GLU 107 0.0354
GLY 108 0.0259
ALA 109 0.0837
GLU 110 0.0827
ALA 111 0.0223
LYS 112 0.0190
PRO 113 0.0084
TRP 114 0.0063
TYR 115 0.0060
GLU 116 0.0061
PRO 117 0.0032
ILE 118 0.0043
TYR 119 0.0048
LEU 120 0.0044
GLY 121 0.0048
GLY 122 0.0058
VAL 123 0.0051
PHE 124 0.0075
GLN 125 0.0111
LEU 126 0.0132
GLU 127 0.0172
LYS 128 0.0205
GLY 129 0.0185
ASP 130 0.0169
ARG 131 0.0160
LEU 132 0.0107
SER 133 0.0098
ALA 134 0.0085
GLU 135 0.0073
ILE 136 0.0062
ASN 137 0.0074
ARG 138 0.0051
PRO 139 0.0056
ASP 140 0.0052
TYR 141 0.0037
LEU 142 0.0055
LEU 143 0.0072
PHE 144 0.0133
ALA 145 0.0128
GLU 146 0.0100
SER 147 0.0075
GLY 148 0.0070
GLN 149 0.0067
VAL 150 0.0044
TYR 151 0.0036
PHE 152 0.0035
GLY 153 0.0018
ILE 154 0.0017
ILE 155 0.0021
ALA 156 0.0061
LEU 157 0.0071

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** LYMPHOKINE 25-AUG-89 1TNF ***

<R2> analysis for 2406080142331607873

--- normal mode 34 ---

Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873