Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873

--- normal mode 17 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.1176
ARG 6 0.0031
THR 7 0.0022
PRO 8 0.0021
SER 9 0.0031
ASP 10 0.0046
LYS 11 0.0045
PRO 12 0.0045
VAL 13 0.0034
ALA 14 0.0027
HIS 15 0.0028
VAL 16 0.0021
VAL 17 0.0022
ALA 18 0.0016
ASN 19 0.0034
PRO 20 0.0047
GLN 21 0.0093
ALA 22 0.0081
GLU 23 0.0124
GLY 24 0.0062
GLN 25 0.0043
LEU 26 0.0026
GLN 27 0.0041
TRP 28 0.0033
LEU 29 0.0035
ASN 30 0.0030
ARG 31 0.0036
ARG 32 0.0034
ALA 33 0.0043
ASN 34 0.0035
ALA 35 0.0026
LEU 36 0.0022
LEU 37 0.0035
ALA 38 0.0040
ASN 39 0.0056
GLY 40 0.0074
VAL 41 0.0063
GLU 42 0.0082
LEU 43 0.0065
ARG 44 0.0086
ASP 45 0.0079
ASN 46 0.0056
GLN 47 0.0060
LEU 48 0.0061
VAL 49 0.0080
VAL 50 0.0082
PRO 51 0.0073
SER 52 0.0078
GLU 53 0.0088
GLY 54 0.0065
LEU 55 0.0064
TYR 56 0.0054
LEU 57 0.0058
ILE 58 0.0054
TYR 59 0.0053
SER 60 0.0053
GLN 61 0.0053
VAL 62 0.0046
LEU 63 0.0069
PHE 64 0.0055
LYS 65 0.0064
GLY 66 0.0172
GLN 67 0.0228
GLY 68 0.0226
CYS 69 0.0136
PRO 70 0.0113
SER 71 0.0118
THR 72 0.0184
HIS 73 0.0149
VAL 74 0.0095
LEU 75 0.0057
LEU 76 0.0037
THR 77 0.0054
HIS 78 0.0044
THR 79 0.0044
ILE 80 0.0049
SER 81 0.0058
ARG 82 0.0073
ILE 83 0.0088
ALA 84 0.0123
VAL 85 0.0152
SER 86 0.0182
TYR 87 0.0157
GLN 88 0.0144
THR 89 0.0123
LYS 90 0.0072
VAL 91 0.0084
ASN 92 0.0075
LEU 93 0.0062
LEU 94 0.0059
SER 95 0.0056
ALA 96 0.0039
ILE 97 0.0031
LYS 98 0.0025
SER 99 0.0067
PRO 100 0.0052
CYS 101 0.0086
GLN 102 0.0118
ARG 103 0.0127
GLU 104 0.0135
THR 105 0.0247
PRO 106 0.0375
GLU 107 0.0665
GLY 108 0.0683
ALA 109 0.0566
GLU 110 0.0485
ALA 111 0.0365
LYS 112 0.0279
PRO 113 0.0234
TRP 114 0.0097
TYR 115 0.0089
GLU 116 0.0063
PRO 117 0.0049
ILE 118 0.0044
TYR 119 0.0050
LEU 120 0.0056
GLY 121 0.0058
GLY 122 0.0064
VAL 123 0.0066
PHE 124 0.0066
GLN 125 0.0075
LEU 126 0.0090
GLU 127 0.0105
LYS 128 0.0105
GLY 129 0.0118
ASP 130 0.0106
ARG 131 0.0084
LEU 132 0.0060
SER 133 0.0047
ALA 134 0.0037
GLU 135 0.0037
ILE 136 0.0034
ASN 137 0.0038
ARG 138 0.0040
PRO 139 0.0039
ASP 140 0.0042
TYR 141 0.0045
LEU 142 0.0049
LEU 143 0.0063
PHE 144 0.0047
ALA 145 0.0062
GLU 146 0.0062
SER 147 0.0053
GLY 148 0.0060
GLN 149 0.0054
VAL 150 0.0035
TYR 151 0.0031
PHE 152 0.0037
GLY 153 0.0035
ILE 154 0.0042
ILE 155 0.0041
ALA 156 0.0040
LEU 157 0.0046
ARG 6 0.0079
THR 7 0.0047
PRO 8 0.0035
SER 9 0.0037
ASP 10 0.0023
LYS 11 0.0021
PRO 12 0.0036
VAL 13 0.0034
ALA 14 0.0033
HIS 15 0.0050
VAL 16 0.0054
VAL 17 0.0065
ALA 18 0.0067
ASN 19 0.0092
PRO 20 0.0113
GLN 21 0.0142
ALA 22 0.0127
GLU 23 0.0146
GLY 24 0.0122
GLN 25 0.0102
LEU 26 0.0076
GLN 27 0.0071
TRP 28 0.0059
LEU 29 0.0069
ASN 30 0.0069
ARG 31 0.0087
ARG 32 0.0098
ALA 33 0.0130
ASN 34 0.0088
ALA 35 0.0079
LEU 36 0.0065
LEU 37 0.0046
ALA 38 0.0066
ASN 39 0.0079
GLY 40 0.0094
VAL 41 0.0071
GLU 42 0.0098
LEU 43 0.0066
ARG 44 0.0108
ASP 45 0.0081
ASN 46 0.0040
GLN 47 0.0045
LEU 48 0.0058
VAL 49 0.0100
VAL 50 0.0095
PRO 51 0.0108
SER 52 0.0100
GLU 53 0.0081
GLY 54 0.0030
LEU 55 0.0011
TYR 56 0.0010
LEU 57 0.0031
ILE 58 0.0035
TYR 59 0.0049
SER 60 0.0053
GLN 61 0.0054
VAL 62 0.0054
LEU 63 0.0037
PHE 64 0.0014
LYS 65 0.0025
GLY 66 0.0074
GLN 67 0.0140
GLY 68 0.0167
CYS 69 0.0202
PRO 70 0.0241
SER 71 0.0330
THR 72 0.0272
HIS 73 0.0187
VAL 74 0.0146
LEU 75 0.0059
LEU 76 0.0030
THR 77 0.0051
HIS 78 0.0062
THR 79 0.0052
ILE 80 0.0040
SER 81 0.0063
ARG 82 0.0076
ILE 83 0.0137
ALA 84 0.0215
VAL 85 0.0341
SER 86 0.0464
TYR 87 0.0494
GLN 88 0.0382
THR 89 0.0342
LYS 90 0.0122
VAL 91 0.0144
ASN 92 0.0130
LEU 93 0.0053
LEU 94 0.0059
SER 95 0.0068
ALA 96 0.0030
ILE 97 0.0014
LYS 98 0.0009
SER 99 0.0069
PRO 100 0.0067
CYS 101 0.0102
GLN 102 0.0112
ARG 103 0.0176
GLU 104 0.0193
THR 105 0.0422
PRO 106 0.0524
GLU 107 0.1176
GLY 108 0.1044
ALA 109 0.0751
GLU 110 0.0115
ALA 111 0.0296
LYS 112 0.0257
PRO 113 0.0195
TRP 114 0.0085
TYR 115 0.0050
GLU 116 0.0013
PRO 117 0.0033
ILE 118 0.0037
TYR 119 0.0045
LEU 120 0.0051
GLY 121 0.0044
GLY 122 0.0039
VAL 123 0.0038
PHE 124 0.0028
GLN 125 0.0029
LEU 126 0.0065
GLU 127 0.0107
LYS 128 0.0141
GLY 129 0.0186
ASP 130 0.0139
ARG 131 0.0107
LEU 132 0.0038
SER 133 0.0012
ALA 134 0.0037
GLU 135 0.0047
ILE 136 0.0049
ASN 137 0.0043
ARG 138 0.0061
PRO 139 0.0057
ASP 140 0.0034
TYR 141 0.0023
LEU 142 0.0034
LEU 143 0.0036
PHE 144 0.0049
ALA 145 0.0041
GLU 146 0.0047
SER 147 0.0053
GLY 148 0.0052
GLN 149 0.0053
VAL 150 0.0059
TYR 151 0.0051
PHE 152 0.0042
GLY 153 0.0039
ILE 154 0.0024
ILE 155 0.0025
ALA 156 0.0021
LEU 157 0.0017
ARG 6 0.0025
THR 7 0.0024
PRO 8 0.0024
SER 9 0.0016
ASP 10 0.0021
LYS 11 0.0018
PRO 12 0.0028
VAL 13 0.0029
ALA 14 0.0034
HIS 15 0.0034
VAL 16 0.0051
VAL 17 0.0064
ALA 18 0.0085
ASN 19 0.0123
PRO 20 0.0142
GLN 21 0.0189
ALA 22 0.0183
GLU 23 0.0184
GLY 24 0.0147
GLN 25 0.0137
LEU 26 0.0104
GLN 27 0.0111
TRP 28 0.0089
LEU 29 0.0095
ASN 30 0.0077
ARG 31 0.0075
ARG 32 0.0082
ALA 33 0.0053
ASN 34 0.0042
ALA 35 0.0037
LEU 36 0.0035
LEU 37 0.0041
ALA 38 0.0036
ASN 39 0.0035
GLY 40 0.0043
VAL 41 0.0046
GLU 42 0.0051
LEU 43 0.0059
ARG 44 0.0066
ASP 45 0.0066
ASN 46 0.0067
GLN 47 0.0066
LEU 48 0.0051
VAL 49 0.0051
VAL 50 0.0048
PRO 51 0.0047
SER 52 0.0041
GLU 53 0.0039
GLY 54 0.0030
LEU 55 0.0033
TYR 56 0.0039
LEU 57 0.0039
ILE 58 0.0037
TYR 59 0.0036
SER 60 0.0036
GLN 61 0.0033
VAL 62 0.0032
LEU 63 0.0033
PHE 64 0.0022
LYS 65 0.0024
GLY 66 0.0072
GLN 67 0.0111
GLY 68 0.0097
CYS 69 0.0085
PRO 70 0.0114
SER 71 0.0127
THR 72 0.0088
HIS 73 0.0090
VAL 74 0.0054
LEU 75 0.0062
LEU 76 0.0049
THR 77 0.0066
HIS 78 0.0053
THR 79 0.0051
ILE 80 0.0052
SER 81 0.0065
ARG 82 0.0062
ILE 83 0.0057
ALA 84 0.0105
VAL 85 0.0129
SER 86 0.0205
TYR 87 0.0251
GLN 88 0.0180
THR 89 0.0125
LYS 90 0.0067
VAL 91 0.0083
ASN 92 0.0087
LEU 93 0.0058
LEU 94 0.0061
SER 95 0.0068
ALA 96 0.0063
ILE 97 0.0059
LYS 98 0.0045
SER 99 0.0080
PRO 100 0.0051
CYS 101 0.0084
GLN 102 0.0185
ARG 103 0.0173
GLU 104 0.0179
THR 105 0.0175
PRO 106 0.0344
GLU 107 0.0913
GLY 108 0.0710
ALA 109 0.0288
GLU 110 0.0329
ALA 111 0.0179
LYS 112 0.0090
PRO 113 0.0107
TRP 114 0.0037
TYR 115 0.0030
GLU 116 0.0021
PRO 117 0.0021
ILE 118 0.0022
TYR 119 0.0028
LEU 120 0.0046
GLY 121 0.0049
GLY 122 0.0048
VAL 123 0.0048
PHE 124 0.0046
GLN 125 0.0040
LEU 126 0.0051
GLU 127 0.0048
LYS 128 0.0047
GLY 129 0.0048
ASP 130 0.0053
ARG 131 0.0056
LEU 132 0.0046
SER 133 0.0052
ALA 134 0.0060
GLU 135 0.0064
ILE 136 0.0062
ASN 137 0.0068
ARG 138 0.0067
PRO 139 0.0074
ASP 140 0.0060
TYR 141 0.0033
LEU 142 0.0047
LEU 143 0.0055
PHE 144 0.0101
ALA 145 0.0106
GLU 146 0.0092
SER 147 0.0050
GLY 148 0.0047
GLN 149 0.0046
VAL 150 0.0047
TYR 151 0.0046
PHE 152 0.0040
GLY 153 0.0037
ILE 154 0.0033
ILE 155 0.0027
ALA 156 0.0033
LEU 157 0.0029

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** LYMPHOKINE 25-AUG-89 1TNF ***

<R2> analysis for 2406080142331607873

--- normal mode 17 ---

Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873