Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873

--- normal mode 15 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.1277
ARG 6 0.0059
THR 7 0.0036
PRO 8 0.0039
SER 9 0.0025
ASP 10 0.0019
LYS 11 0.0017
PRO 12 0.0020
VAL 13 0.0019
ALA 14 0.0016
HIS 15 0.0020
VAL 16 0.0022
VAL 17 0.0029
ALA 18 0.0047
ASN 19 0.0081
PRO 20 0.0098
GLN 21 0.0151
ALA 22 0.0139
GLU 23 0.0157
GLY 24 0.0135
GLN 25 0.0109
LEU 26 0.0068
GLN 27 0.0063
TRP 28 0.0048
LEU 29 0.0054
ASN 30 0.0041
ARG 31 0.0053
ARG 32 0.0056
ALA 33 0.0037
ASN 34 0.0040
ALA 35 0.0020
LEU 36 0.0020
LEU 37 0.0015
ALA 38 0.0023
ASN 39 0.0019
GLY 40 0.0018
VAL 41 0.0017
GLU 42 0.0022
LEU 43 0.0027
ARG 44 0.0032
ASP 45 0.0041
ASN 46 0.0042
GLN 47 0.0034
LEU 48 0.0017
VAL 49 0.0017
VAL 50 0.0018
PRO 51 0.0022
SER 52 0.0022
GLU 53 0.0020
GLY 54 0.0026
LEU 55 0.0027
TYR 56 0.0027
LEU 57 0.0021
ILE 58 0.0019
TYR 59 0.0019
SER 60 0.0013
GLN 61 0.0016
VAL 62 0.0015
LEU 63 0.0019
PHE 64 0.0018
LYS 65 0.0022
GLY 66 0.0019
GLN 67 0.0035
GLY 68 0.0049
CYS 69 0.0040
PRO 70 0.0023
SER 71 0.0024
THR 72 0.0052
HIS 73 0.0065
VAL 74 0.0064
LEU 75 0.0046
LEU 76 0.0042
THR 77 0.0050
HIS 78 0.0024
THR 79 0.0020
ILE 80 0.0017
SER 81 0.0019
ARG 82 0.0016
ILE 83 0.0020
ALA 84 0.0016
VAL 85 0.0015
SER 86 0.0017
TYR 87 0.0021
GLN 88 0.0023
THR 89 0.0027
LYS 90 0.0022
VAL 91 0.0017
ASN 92 0.0015
LEU 93 0.0009
LEU 94 0.0013
SER 95 0.0017
ALA 96 0.0033
ILE 97 0.0038
LYS 98 0.0034
SER 99 0.0042
PRO 100 0.0015
CYS 101 0.0022
GLN 102 0.0061
ARG 103 0.0073
GLU 104 0.0097
THR 105 0.0082
PRO 106 0.0105
GLU 107 0.0154
GLY 108 0.0130
ALA 109 0.0093
GLU 110 0.0104
ALA 111 0.0070
LYS 112 0.0028
PRO 113 0.0021
TRP 114 0.0012
TYR 115 0.0011
GLU 116 0.0010
PRO 117 0.0016
ILE 118 0.0010
TYR 119 0.0014
LEU 120 0.0018
GLY 121 0.0023
GLY 122 0.0024
VAL 123 0.0030
PHE 124 0.0026
GLN 125 0.0025
LEU 126 0.0017
GLU 127 0.0016
LYS 128 0.0018
GLY 129 0.0016
ASP 130 0.0016
ARG 131 0.0020
LEU 132 0.0016
SER 133 0.0023
ALA 134 0.0026
GLU 135 0.0043
ILE 136 0.0045
ASN 137 0.0054
ARG 138 0.0058
PRO 139 0.0063
ASP 140 0.0061
TYR 141 0.0037
LEU 142 0.0041
LEU 143 0.0043
PHE 144 0.0059
ALA 145 0.0066
GLU 146 0.0061
SER 147 0.0039
GLY 148 0.0038
GLN 149 0.0027
VAL 150 0.0019
TYR 151 0.0020
PHE 152 0.0014
GLY 153 0.0016
ILE 154 0.0018
ILE 155 0.0020
ALA 156 0.0023
LEU 157 0.0025
ARG 6 0.0123
THR 7 0.0071
PRO 8 0.0020
SER 9 0.0064
ASP 10 0.0066
LYS 11 0.0057
PRO 12 0.0053
VAL 13 0.0048
ALA 14 0.0043
HIS 15 0.0035
VAL 16 0.0033
VAL 17 0.0027
ALA 18 0.0025
ASN 19 0.0033
PRO 20 0.0029
GLN 21 0.0052
ALA 22 0.0054
GLU 23 0.0063
GLY 24 0.0047
GLN 25 0.0042
LEU 26 0.0034
GLN 27 0.0041
TRP 28 0.0039
LEU 29 0.0044
ASN 30 0.0043
ARG 31 0.0049
ARG 32 0.0039
ALA 33 0.0027
ASN 34 0.0026
ALA 35 0.0033
LEU 36 0.0042
LEU 37 0.0050
ALA 38 0.0059
ASN 39 0.0066
GLY 40 0.0066
VAL 41 0.0059
GLU 42 0.0064
LEU 43 0.0057
ARG 44 0.0063
ASP 45 0.0061
ASN 46 0.0052
GLN 47 0.0049
LEU 48 0.0047
VAL 49 0.0051
VAL 50 0.0051
PRO 51 0.0057
SER 52 0.0049
GLU 53 0.0034
GLY 54 0.0025
LEU 55 0.0024
TYR 56 0.0027
LEU 57 0.0033
ILE 58 0.0032
TYR 59 0.0031
SER 60 0.0029
GLN 61 0.0023
VAL 62 0.0017
LEU 63 0.0046
PHE 64 0.0035
LYS 65 0.0048
GLY 66 0.0122
GLN 67 0.0207
GLY 68 0.0226
CYS 69 0.0130
PRO 70 0.0128
SER 71 0.0123
THR 72 0.0129
HIS 73 0.0099
VAL 74 0.0071
LEU 75 0.0043
LEU 76 0.0030
THR 77 0.0039
HIS 78 0.0023
THR 79 0.0027
ILE 80 0.0034
SER 81 0.0037
ARG 82 0.0042
ILE 83 0.0044
ALA 84 0.0064
VAL 85 0.0064
SER 86 0.0098
TYR 87 0.0154
GLN 88 0.0100
THR 89 0.0110
LYS 90 0.0051
VAL 91 0.0054
ASN 92 0.0042
LEU 93 0.0037
LEU 94 0.0036
SER 95 0.0035
ALA 96 0.0032
ILE 97 0.0024
LYS 98 0.0016
SER 99 0.0053
PRO 100 0.0035
CYS 101 0.0055
GLN 102 0.0087
ARG 103 0.0099
GLU 104 0.0124
THR 105 0.0253
PRO 106 0.0521
GLU 107 0.1277
GLY 108 0.0831
ALA 109 0.0346
GLU 110 0.0843
ALA 111 0.0240
LYS 112 0.0168
PRO 113 0.0167
TRP 114 0.0065
TYR 115 0.0060
GLU 116 0.0042
PRO 117 0.0022
ILE 118 0.0020
TYR 119 0.0026
LEU 120 0.0032
GLY 121 0.0033
GLY 122 0.0033
VAL 123 0.0025
PHE 124 0.0027
GLN 125 0.0027
LEU 126 0.0034
GLU 127 0.0042
LYS 128 0.0049
GLY 129 0.0055
ASP 130 0.0049
ARG 131 0.0044
LEU 132 0.0040
SER 133 0.0036
ALA 134 0.0032
GLU 135 0.0034
ILE 136 0.0028
ASN 137 0.0033
ARG 138 0.0030
PRO 139 0.0027
ASP 140 0.0032
TYR 141 0.0025
LEU 142 0.0025
LEU 143 0.0033
PHE 144 0.0014
ALA 145 0.0021
GLU 146 0.0020
SER 147 0.0016
GLY 148 0.0021
GLN 149 0.0020
VAL 150 0.0011
TYR 151 0.0021
PHE 152 0.0029
GLY 153 0.0037
ILE 154 0.0037
ILE 155 0.0039
ALA 156 0.0026
LEU 157 0.0024
ARG 6 0.0046
THR 7 0.0052
PRO 8 0.0043
SER 9 0.0038
ASP 10 0.0058
LYS 11 0.0050
PRO 12 0.0059
VAL 13 0.0041
ALA 14 0.0028
HIS 15 0.0029
VAL 16 0.0035
VAL 17 0.0050
ALA 18 0.0064
ASN 19 0.0083
PRO 20 0.0096
GLN 21 0.0117
ALA 22 0.0111
GLU 23 0.0124
GLY 24 0.0107
GLN 25 0.0092
LEU 26 0.0074
GLN 27 0.0063
TRP 28 0.0051
LEU 29 0.0063
ASN 30 0.0059
ARG 31 0.0077
ARG 32 0.0083
ALA 33 0.0059
ASN 34 0.0049
ALA 35 0.0052
LEU 36 0.0048
LEU 37 0.0055
ALA 38 0.0069
ASN 39 0.0088
GLY 40 0.0095
VAL 41 0.0077
GLU 42 0.0083
LEU 43 0.0056
ARG 44 0.0078
ASP 45 0.0045
ASN 46 0.0018
GLN 47 0.0034
LEU 48 0.0050
VAL 49 0.0088
VAL 50 0.0102
PRO 51 0.0121
SER 52 0.0138
GLU 53 0.0130
GLY 54 0.0070
LEU 55 0.0042
TYR 56 0.0026
LEU 57 0.0019
ILE 58 0.0024
TYR 59 0.0031
SER 60 0.0040
GLN 61 0.0044
VAL 62 0.0050
LEU 63 0.0044
PHE 64 0.0036
LYS 65 0.0028
GLY 66 0.0029
GLN 67 0.0076
GLY 68 0.0130
CYS 69 0.0185
PRO 70 0.0257
SER 71 0.0319
THR 72 0.0249
HIS 73 0.0143
VAL 74 0.0101
LEU 75 0.0037
LEU 76 0.0035
THR 77 0.0055
HIS 78 0.0070
THR 79 0.0059
ILE 80 0.0045
SER 81 0.0087
ARG 82 0.0096
ILE 83 0.0133
ALA 84 0.0240
VAL 85 0.0316
SER 86 0.0422
TYR 87 0.0444
GLN 88 0.0327
THR 89 0.0236
LYS 90 0.0156
VAL 91 0.0165
ASN 92 0.0145
LEU 93 0.0059
LEU 94 0.0061
SER 95 0.0076
ALA 96 0.0035
ILE 97 0.0031
LYS 98 0.0026
SER 99 0.0016
PRO 100 0.0016
CYS 101 0.0045
GLN 102 0.0022
ARG 103 0.0110
GLU 104 0.0160
THR 105 0.0313
PRO 106 0.0524
GLU 107 0.1202
GLY 108 0.1163
ALA 109 0.0876
GLU 110 0.0542
ALA 111 0.0198
LYS 112 0.0174
PRO 113 0.0114
TRP 114 0.0043
TYR 115 0.0034
GLU 116 0.0019
PRO 117 0.0036
ILE 118 0.0036
TYR 119 0.0037
LEU 120 0.0044
GLY 121 0.0036
GLY 122 0.0032
VAL 123 0.0029
PHE 124 0.0037
GLN 125 0.0051
LEU 126 0.0102
GLU 127 0.0144
LYS 128 0.0170
GLY 129 0.0181
ASP 130 0.0147
ARG 131 0.0109
LEU 132 0.0046
SER 133 0.0033
ALA 134 0.0045
GLU 135 0.0062
ILE 136 0.0061
ASN 137 0.0065
ARG 138 0.0083
PRO 139 0.0083
ASP 140 0.0067
TYR 141 0.0054
LEU 142 0.0061
LEU 143 0.0051
PHE 144 0.0069
ALA 145 0.0066
GLU 146 0.0062
SER 147 0.0042
GLY 148 0.0038
GLN 149 0.0043
VAL 150 0.0050
TYR 151 0.0038
PHE 152 0.0029
GLY 153 0.0010
ILE 154 0.0014
ILE 155 0.0020
ALA 156 0.0032
LEU 157 0.0023

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** LYMPHOKINE 25-AUG-89 1TNF ***

<R2> analysis for 2406080142331607873

--- normal mode 15 ---

Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873