Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873

--- normal mode 10 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.2773
ARG 6 0.0078
THR 7 0.0107
PRO 8 0.0131
SER 9 0.0138
ASP 10 0.0162
LYS 11 0.0130
PRO 12 0.0118
VAL 13 0.0090
ALA 14 0.0086
HIS 15 0.0049
VAL 16 0.0063
VAL 17 0.0068
ALA 18 0.0081
ASN 19 0.0099
PRO 20 0.0115
GLN 21 0.0156
ALA 22 0.0153
GLU 23 0.0181
GLY 24 0.0153
GLN 25 0.0131
LEU 26 0.0096
GLN 27 0.0110
TRP 28 0.0090
LEU 29 0.0081
ASN 30 0.0071
ARG 31 0.0054
ARG 32 0.0042
ALA 33 0.0032
ASN 34 0.0023
ALA 35 0.0043
LEU 36 0.0069
LEU 37 0.0103
ALA 38 0.0119
ASN 39 0.0155
GLY 40 0.0182
VAL 41 0.0157
GLU 42 0.0167
LEU 43 0.0155
ARG 44 0.0186
ASP 45 0.0181
ASN 46 0.0142
GLN 47 0.0131
LEU 48 0.0131
VAL 49 0.0151
VAL 50 0.0133
PRO 51 0.0196
SER 52 0.0173
GLU 53 0.0134
GLY 54 0.0091
LEU 55 0.0057
TYR 56 0.0064
LEU 57 0.0035
ILE 58 0.0042
TYR 59 0.0038
SER 60 0.0037
GLN 61 0.0039
VAL 62 0.0049
LEU 63 0.0048
PHE 64 0.0047
LYS 65 0.0051
GLY 66 0.0049
GLN 67 0.0036
GLY 68 0.0040
CYS 69 0.0056
PRO 70 0.0078
SER 71 0.0099
THR 72 0.0091
HIS 73 0.0078
VAL 74 0.0061
LEU 75 0.0024
LEU 76 0.0028
THR 77 0.0030
HIS 78 0.0046
THR 79 0.0051
ILE 80 0.0048
SER 81 0.0077
ARG 82 0.0075
ILE 83 0.0101
ALA 84 0.0090
VAL 85 0.0098
SER 86 0.0085
TYR 87 0.0095
GLN 88 0.0123
THR 89 0.0135
LYS 90 0.0104
VAL 91 0.0085
ASN 92 0.0075
LEU 93 0.0045
LEU 94 0.0044
SER 95 0.0048
ALA 96 0.0028
ILE 97 0.0014
LYS 98 0.0010
SER 99 0.0019
PRO 100 0.0013
CYS 101 0.0036
GLN 102 0.0075
ARG 103 0.0093
GLU 104 0.0088
THR 105 0.0088
PRO 106 0.0083
GLU 107 0.0119
GLY 108 0.0108
ALA 109 0.0063
GLU 110 0.0058
ALA 111 0.0035
LYS 112 0.0017
PRO 113 0.0030
TRP 114 0.0028
TYR 115 0.0036
GLU 116 0.0033
PRO 117 0.0038
ILE 118 0.0036
TYR 119 0.0033
LEU 120 0.0038
GLY 121 0.0032
GLY 122 0.0029
VAL 123 0.0021
PHE 124 0.0030
GLN 125 0.0062
LEU 126 0.0045
GLU 127 0.0070
LYS 128 0.0119
GLY 129 0.0142
ASP 130 0.0114
ARG 131 0.0121
LEU 132 0.0083
SER 133 0.0089
ALA 134 0.0073
GLU 135 0.0044
ILE 136 0.0048
ASN 137 0.0060
ARG 138 0.0060
PRO 139 0.0077
ASP 140 0.0080
TYR 141 0.0059
LEU 142 0.0068
LEU 143 0.0074
PHE 144 0.0103
ALA 145 0.0107
GLU 146 0.0088
SER 147 0.0064
GLY 148 0.0049
GLN 149 0.0053
VAL 150 0.0058
TYR 151 0.0048
PHE 152 0.0052
GLY 153 0.0063
ILE 154 0.0063
ILE 155 0.0064
ALA 156 0.0060
LEU 157 0.0048
ARG 6 0.2773
THR 7 0.1759
PRO 8 0.0756
SER 9 0.0135
ASP 10 0.0094
LYS 11 0.0053
PRO 12 0.0025
VAL 13 0.0028
ALA 14 0.0024
HIS 15 0.0040
VAL 16 0.0052
VAL 17 0.0059
ALA 18 0.0066
ASN 19 0.0083
PRO 20 0.0090
GLN 21 0.0112
ALA 22 0.0102
GLU 23 0.0103
GLY 24 0.0077
GLN 25 0.0079
LEU 26 0.0069
GLN 27 0.0075
TRP 28 0.0069
LEU 29 0.0075
ASN 30 0.0066
ARG 31 0.0075
ARG 32 0.0072
ALA 33 0.0060
ASN 34 0.0048
ALA 35 0.0047
LEU 36 0.0032
LEU 37 0.0039
ALA 38 0.0035
ASN 39 0.0036
GLY 40 0.0042
VAL 41 0.0036
GLU 42 0.0048
LEU 43 0.0056
ARG 44 0.0066
ASP 45 0.0066
ASN 46 0.0064
GLN 47 0.0063
LEU 48 0.0048
VAL 49 0.0048
VAL 50 0.0047
PRO 51 0.0037
SER 52 0.0045
GLU 53 0.0050
GLY 54 0.0044
LEU 55 0.0041
TYR 56 0.0042
LEU 57 0.0034
ILE 58 0.0034
TYR 59 0.0034
SER 60 0.0043
GLN 61 0.0040
VAL 62 0.0039
LEU 63 0.0024
PHE 64 0.0012
LYS 65 0.0021
GLY 66 0.0063
GLN 67 0.0113
GLY 68 0.0141
CYS 69 0.0129
PRO 70 0.0138
SER 71 0.0162
THR 72 0.0158
HIS 73 0.0115
VAL 74 0.0083
LEU 75 0.0047
LEU 76 0.0026
THR 77 0.0039
HIS 78 0.0041
THR 79 0.0045
ILE 80 0.0049
SER 81 0.0052
ARG 82 0.0052
ILE 83 0.0062
ALA 84 0.0061
VAL 85 0.0072
SER 86 0.0071
TYR 87 0.0077
GLN 88 0.0079
THR 89 0.0082
LYS 90 0.0062
VAL 91 0.0054
ASN 92 0.0048
LEU 93 0.0040
LEU 94 0.0037
SER 95 0.0038
ALA 96 0.0037
ILE 97 0.0029
LYS 98 0.0018
SER 99 0.0051
PRO 100 0.0047
CYS 101 0.0078
GLN 102 0.0113
ARG 103 0.0141
GLU 104 0.0148
THR 105 0.0211
PRO 106 0.0226
GLU 107 0.0288
GLY 108 0.0331
ALA 109 0.0274
GLU 110 0.0301
ALA 111 0.0177
LYS 112 0.0133
PRO 113 0.0099
TRP 114 0.0047
TYR 115 0.0026
GLU 116 0.0010
PRO 117 0.0024
ILE 118 0.0027
TYR 119 0.0031
LEU 120 0.0035
GLY 121 0.0035
GLY 122 0.0034
VAL 123 0.0035
PHE 124 0.0035
GLN 125 0.0036
LEU 126 0.0042
GLU 127 0.0045
LYS 128 0.0052
GLY 129 0.0060
ASP 130 0.0057
ARG 131 0.0058
LEU 132 0.0054
SER 133 0.0057
ALA 134 0.0054
GLU 135 0.0053
ILE 136 0.0039
ASN 137 0.0035
ARG 138 0.0028
PRO 139 0.0029
ASP 140 0.0019
TYR 141 0.0017
LEU 142 0.0023
LEU 143 0.0035
PHE 144 0.0062
ALA 145 0.0068
GLU 146 0.0061
SER 147 0.0059
GLY 148 0.0052
GLN 149 0.0045
VAL 150 0.0048
TYR 151 0.0048
PHE 152 0.0048
GLY 153 0.0039
ILE 154 0.0031
ILE 155 0.0027
ALA 156 0.0046
LEU 157 0.0041
ARG 6 0.0059
THR 7 0.0071
PRO 8 0.0075
SER 9 0.0086
ASP 10 0.0095
LYS 11 0.0085
PRO 12 0.0096
VAL 13 0.0070
ALA 14 0.0056
HIS 15 0.0035
VAL 16 0.0038
VAL 17 0.0040
ALA 18 0.0047
ASN 19 0.0058
PRO 20 0.0067
GLN 21 0.0081
ALA 22 0.0078
GLU 23 0.0083
GLY 24 0.0061
GLN 25 0.0058
LEU 26 0.0053
GLN 27 0.0071
TRP 28 0.0058
LEU 29 0.0053
ASN 30 0.0047
ARG 31 0.0035
ARG 32 0.0035
ALA 33 0.0035
ASN 34 0.0029
ALA 35 0.0031
LEU 36 0.0046
LEU 37 0.0066
ALA 38 0.0078
ASN 39 0.0108
GLY 40 0.0121
VAL 41 0.0110
GLU 42 0.0119
LEU 43 0.0112
ARG 44 0.0140
ASP 45 0.0146
ASN 46 0.0114
GLN 47 0.0111
LEU 48 0.0105
VAL 49 0.0135
VAL 50 0.0136
PRO 51 0.0169
SER 52 0.0183
GLU 53 0.0172
GLY 54 0.0125
LEU 55 0.0090
TYR 56 0.0078
LEU 57 0.0047
ILE 58 0.0037
TYR 59 0.0028
SER 60 0.0027
GLN 61 0.0027
VAL 62 0.0027
LEU 63 0.0027
PHE 64 0.0019
LYS 65 0.0020
GLY 66 0.0063
GLN 67 0.0086
GLY 68 0.0091
CYS 69 0.0086
PRO 70 0.0095
SER 71 0.0088
THR 72 0.0050
HIS 73 0.0031
VAL 74 0.0032
LEU 75 0.0027
LEU 76 0.0025
THR 77 0.0027
HIS 78 0.0044
THR 79 0.0046
ILE 80 0.0045
SER 81 0.0093
ARG 82 0.0112
ILE 83 0.0155
ALA 84 0.0203
VAL 85 0.0254
SER 86 0.0311
TYR 87 0.0324
GLN 88 0.0286
THR 89 0.0249
LYS 90 0.0158
VAL 91 0.0125
ASN 92 0.0086
LEU 93 0.0049
LEU 94 0.0042
SER 95 0.0054
ALA 96 0.0043
ILE 97 0.0040
LYS 98 0.0031
SER 99 0.0018
PRO 100 0.0015
CYS 101 0.0033
GLN 102 0.0059
ARG 103 0.0076
GLU 104 0.0103
THR 105 0.0109
PRO 106 0.0183
GLU 107 0.0325
GLY 108 0.0326
ALA 109 0.0270
GLU 110 0.0251
ALA 111 0.0151
LYS 112 0.0125
PRO 113 0.0085
TRP 114 0.0035
TYR 115 0.0025
GLU 116 0.0018
PRO 117 0.0024
ILE 118 0.0029
TYR 119 0.0030
LEU 120 0.0031
GLY 121 0.0026
GLY 122 0.0026
VAL 123 0.0044
PHE 124 0.0055
GLN 125 0.0085
LEU 126 0.0127
GLU 127 0.0170
LYS 128 0.0200
GLY 129 0.0190
ASP 130 0.0167
ARG 131 0.0148
LEU 132 0.0089
SER 133 0.0084
ALA 134 0.0065
GLU 135 0.0034
ILE 136 0.0036
ASN 137 0.0037
ARG 138 0.0006
PRO 139 0.0007
ASP 140 0.0009
TYR 141 0.0020
LEU 142 0.0019
LEU 143 0.0020
PHE 144 0.0051
ALA 145 0.0056
GLU 146 0.0047
SER 147 0.0036
GLY 148 0.0033
GLN 149 0.0030
VAL 150 0.0034
TYR 151 0.0027
PHE 152 0.0033
GLY 153 0.0045
ILE 154 0.0052
ILE 155 0.0060
ALA 156 0.0084
LEU 157 0.0075

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** LYMPHOKINE 25-AUG-89 1TNF ***

<R2> analysis for 2406080142331607873

--- normal mode 10 ---

Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

<R²> analysis for 2406080142331607873