CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  TestViola  ***

<R2> analysis for 2406051430261165924

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0444
MET 10.0163
CYS 20.0161
ASN 30.0191
THR 40.0207
ASN 50.0206
MET 60.0224
SER 70.0224
VAL 80.0242
PRO 90.0248
THR 100.0264
ASP 110.0278
GLY 120.0271
ALA 130.0278
VAL 140.0267
THR 150.0255
THR 160.0235
SER 170.0189
GLN 180.0172
ILE 190.0128
PRO 200.0117
ALA 210.0115
SER 220.0104
GLU 230.0087
GLN 240.0095
GLU 250.0079
THR 260.0082
LEU 270.0083
VAL 280.0079
ARG 290.0082
PRO 300.0074
LYS 310.0079
PRO 320.0078
LEU 330.0068
LEU 340.0061
LEU 350.0065
LYS 360.0060
LEU 370.0049
LEU 380.0050
LYS 390.0055
SER 400.0044
VAL 410.0039
GLY 420.0050
ALA 430.0057
GLN 440.0069
LYS 450.0077
ASP 460.0082
THR 470.0081
TYR 480.0071
THR 490.0068
MET 500.0058
LYS 510.0051
GLU 520.0054
VAL 530.0051
LEU 540.0041
PHE 550.0038
TYR 560.0040
LEU 570.0036
GLY 580.0026
GLN 590.0027
TYR 600.0027
ILE 610.0023
MET 620.0018
THR 630.0019
LYS 640.0021
ARG 650.0022
LEU 660.0029
TYR 670.0029
ASP 680.0039
GLU 690.0041
LYS 700.0049
GLN 710.0042
GLN 720.0031
HIS 730.0029
ILE 740.0037
VAL 750.0036
TYR 760.0044
CYS 770.0046
SER 780.0057
ASN 790.0053
ASP 800.0046
LEU 810.0051
LEU 820.0047
GLY 830.0055
ASP 840.0065
LEU 850.0063
PHE 860.0061
GLY 870.0070
VAL 880.0064
PRO 890.0061
SER 900.0052
PHE 910.0047
SER 920.0040
VAL 930.0030
LYS 940.0031
GLU 950.0041
HIS 960.0038
ARG 970.0049
LYS 980.0054
ILE 990.0047
TYR 1000.0052
THR 1010.0063
MET 1020.0061
ILE 1030.0058
TYR 1040.0069
ARG 1050.0075
ASN 1060.0072
LEU 1070.0076
VAL 1080.0087
VAL 1090.0088
VAL 1100.0096
ASN 1110.0105
GLN 1120.0108
GLN 1130.0118
GLU 1140.0117
SER 1150.0114
SER 1160.0115
ASP 1170.0107
SER 1180.0105
GLY 1190.0088
THR 1200.0068
SER 1210.0054
VAL 1220.0012
SER 1230.0053
GLU 1240.0076
ASN 1250.0148
ARG 1260.0181
CYS 1270.0209
HIS 1280.0202
LEU 1290.0173
GLU 1300.0107
GLY 1310.0054
GLY 1320.0059
SER 1330.0077
ASP 1340.0092
GLN 1350.0105
LYS 1360.0119
ASP 1370.0111
LEU 1380.0125
VAL 1390.0110
GLN 1400.0092
GLU 1410.0083
LEU 1420.0072
GLN 1430.0075
GLU 1440.0091
GLU 1450.0112
LYS 1460.0134
PRO 1470.0160
SER 1480.0164
SER 1490.0152
SER 1500.0124
HIS 1510.0090
LEU 1520.0073
VAL 1530.0058
SER 1540.0090
ARG 1550.0141
PRO 1560.0143
SER 1570.0188
THR 1580.0185
SER 1590.0188
SER 1600.0201
ARG 1610.0146
ARG 1620.0131
ARG 1630.0085
ALA 1640.0074
ILE 1650.0093
SER 1660.0148
GLU 1670.0158
THR 1680.0229
GLU 1690.0216
GLU 1700.0252
ASN 1710.0197
SER 1720.0163
ASP 1730.0105
GLU 1740.0102
LEU 1750.0165
SER 1760.0231
GLY 1770.0271
GLU 1780.0256
ARG 1790.0210
GLN 1800.0197
ARG 1810.0154
LYS 1820.0124
ARG 1830.0107
HIS 1840.0067
LYS 1850.0055
SER 1860.0058
ASP 1870.0043
SER 1880.0057
ILE 1890.0065
SER 1900.0064
LEU 1910.0065
SER 1920.0059
PHE 1930.0056
ASP 1940.0051
GLU 1950.0038
SER 1960.0039
LEU 1970.0036
ALA 1980.0025
LEU 1990.0024
CYS 2000.0028
VAL 2010.0018
ILE 2020.0019
ARG 2030.0031
GLU 2040.0034
ILE 2050.0040
CYS 2060.0045
CYS 2070.0061
GLU 2080.0092
ARG 2090.0113
SER 2100.0123
SER 2110.0160
SER 2120.0177
SER 2130.0212
GLU 2140.0251
SER 2150.0250
THR 2160.0277
GLY 2170.0274
THR 2180.0265
PRO 2190.0254
SER 2200.0232
ASN 2210.0237
PRO 2220.0253
ASP 2230.0279
LEU 2240.0313
ASP 2250.0331
ALA 2260.0337
GLY 2270.0339
VAL 2280.0280
SER 2290.0284
GLU 2300.0205
HIS 2310.0202
SER 2320.0143
GLY 2330.0143
ASP 2340.0139
TRP 2350.0143
LEU 2360.0186
ASP 2370.0221
GLN 2380.0233
ASP 2390.0252
SER 2400.0265
VAL 2410.0274
SER 2420.0312
ASP 2430.0317
GLN 2440.0278
PHE 2450.0297
SER 2460.0233
VAL 2470.0280
GLU 2480.0249
PHE 2490.0277
GLU 2500.0284
VAL 2510.0233
GLU 2520.0250
SER 2530.0220
LEU 2540.0177
ASP 2550.0186
SER 2560.0151
GLU 2570.0154
ASP 2580.0140
TYR 2590.0126
SER 2600.0136
LEU 2610.0126
SER 2620.0143
GLU 2630.0145
GLU 2640.0138
GLY 2650.0157
GLN 2660.0163
GLU 2670.0164
LEU 2680.0150
SER 2690.0152
ASP 2700.0137
GLU 2710.0134
ASP 2720.0115
ASP 2730.0107
GLU 2740.0094
VAL 2750.0090
TYR 2760.0078
GLN 2770.0076
VAL 2780.0064
THR 2790.0066
VAL 2800.0052
TYR 2810.0051
GLN 2820.0049
ALA 2830.0050
GLY 2840.0050
GLU 2850.0060
SER 2860.0073
ASP 2870.0070
THR 2880.0088
ASP 2890.0091
SER 2900.0104
PHE 2910.0114
GLU 2920.0129
GLU 2930.0148
ASP 2940.0150
PRO 2950.0160
GLU 2960.0158
ILE 2970.0134
SER 2980.0123
LEU 2990.0101
ALA 3000.0100
ASP 3010.0107
TYR 3020.0086
TRP 3030.0073
LYS 3040.0052
CYS 3050.0048
THR 3060.0049
SER 3070.0049
CYS 3080.0033
ASN 3090.0028
GLU 3100.0036
MET 3110.0054
ASN 3120.0068
PRO 3130.0091
PRO 3140.0106
LEU 3150.0116
PRO 3160.0099
SER 3170.0101
HIS 3180.0081
CYS 3190.0059
ASN 3200.0053
ARG 3210.0035
CYS 3220.0045
TRP 3230.0063
ALA 3240.0071
LEU 3250.0088
ARG 3260.0087
GLU 3270.0095
ASN 3280.0115
TRP 3290.0118
LEU 3300.0138
PRO 3310.0126
GLU 3320.0125
ASP 3330.0137
LYS 3340.0115
GLY 3350.0128
LYS 3360.0095
ASP 3370.0146
LYS 3380.0145
GLY 3390.0208
GLU 3400.0304
ILE 3410.0318
SER 3420.0328
GLU 3430.0295
LYS 3440.0195
ALA 3450.0123
LYS 3460.0099
LEU 3470.0130
GLU 3480.0185
ASN 3490.0238
SER 3500.0270
THR 3510.0292
GLN 3520.0316
ALA 3530.0284
GLU 3540.0283
GLU 3550.0277
GLY 3560.0225
PHE 3570.0234
ASP 3580.0213
VAL 3590.0289
PRO 3600.0288
ASP 3610.0386
CYS 3620.0334
LYS 3630.0360
LYS 3640.0262
THR 3650.0198
ILE 3660.0088
VAL 3670.0047
ASN 3680.0161
ASP 3690.0283
SER 3700.0342
ARG 3710.0444
GLU 3720.0435
SER 3730.0390
CYS 3740.0292
VAL 3750.0250
GLU 3760.0137
GLU 3770.0089
ASN 3780.0122
ASP 3790.0181
ASP 3800.0190
LYS 3810.0245
ILE 3820.0262
THR 3830.0291
GLN 3840.0328
ALA 3850.0317
SER 3860.0295
GLN 3870.0269
SER 3880.0203
GLN 3890.0142
GLU 3900.0094
SER 3910.0081
GLU 3920.0135
ASP 3930.0212
TYR 3940.0270
SER 3950.0299
GLN 3960.0334
PRO 3970.0329
SER 3980.0304
THR 3990.0275
SER 4000.0221
SER 4010.0158
SER 4020.0093
ILE 4030.0058
ILE 4040.0068
TYR 4050.0116
SER 4060.0145
SER 4070.0159
GLN 4080.0164
GLU 4090.0192
ASP 4100.0189
VAL 4110.0161
LYS 4120.0133
GLU 4130.0092
PHE 4140.0046
GLU 4150.0047
ARG 4160.0072
GLU 4170.0101
GLU 4180.0114
THR 4190.0136
GLN 4200.0146
ASP 4210.0134
LYS 4220.0142
GLU 4230.0143
GLU 4240.0134
SER 4250.0129
VAL 4260.0113
GLU 4270.0102
SER 4280.0086
SER 4290.0065
LEU 4300.0058
PRO 4310.0042
LEU 4320.0036
ASN 4330.0031
ALA 4340.0044
ILE 4350.0043
GLU 4360.0036
PRO 4370.0048
CYS 4380.0058
VAL 4390.0061
ILE 4400.0079
CYS 4410.0082
GLN 4420.0065
GLY 4430.0070
ARG 4440.0071
PRO 4450.0058
LYS 4460.0051
ASN 4470.0062
GLY 4480.0067
CYS 4490.0057
ILE 4500.0064
VAL 4510.0060
HIS 4520.0066
GLY 4530.0054
LYS 4540.0031
THR 4550.0035
GLY 4560.0046
HIS 4570.0045
LEU 4580.0042
MET 4590.0050
ALA 4600.0063
CYS 4610.0071
PHE 4620.0083
THR 4630.0098
CYS 4640.0092
ALA 4650.0086
LYS 4660.0104
LYS 4670.0113
LEU 4680.0105
LYS 4690.0108
LYS 4700.0128
ARG 4710.0132
ASN 4720.0125
LYS 4730.0116
PRO 4740.0101
CYS 4750.0082
PRO 4760.0084
VAL 4770.0072
CYS 4780.0077
ARG 4790.0094
GLN 4800.0086
PRO 4810.0094
ILE 4820.0087
GLN 4830.0085
MET 4840.0083
ILE 4850.0080
VAL 4860.0074
LEU 4870.0079
THR 4880.0068
TYR 4890.0077
PHE 4900.0070
PRO 4910.0081

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.