CNRS Nantes University US2B US2B
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***  WildtypeAPP  ***

<R2> analysis for 240603104535825560

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0762
MET 10.0170
LEU 20.0168
PRO 30.0160
GLY 40.0155
LEU 50.0150
ALA 60.0150
LEU 70.0146
LEU 80.0141
LEU 90.0136
LEU 100.0132
ALA 110.0125
ALA 120.0119
TRP 130.0111
THR 140.0105
ALA 150.0097
ARG 160.0092
ALA 170.0089
LEU 180.0089
GLU 190.0087
VAL 200.0082
PRO 210.0081
THR 220.0076
ASP 230.0073
GLY 240.0071
ASN 250.0067
ALA 260.0070
GLY 270.0069
LEU 280.0065
LEU 290.0062
ALA 300.0059
GLU 310.0058
PRO 320.0058
GLN 330.0054
ILE 340.0053
ALA 350.0049
MET 360.0047
PHE 370.0044
CYS 380.0043
GLY 390.0045
ARG 400.0048
LEU 410.0052
ASN 420.0052
MET 430.0053
HIS 440.0056
MET 450.0057
ASN 460.0061
VAL 470.0062
GLN 480.0065
ASN 490.0062
GLY 500.0058
LYS 510.0057
TRP 520.0055
ASP 530.0058
SER 540.0057
ASP 550.0058
PRO 560.0062
SER 570.0062
GLY 580.0059
THR 590.0057
LYS 600.0054
THR 610.0050
CYS 620.0047
ILE 630.0048
ASP 640.0045
THR 650.0048
LYS 660.0050
GLU 670.0053
GLY 680.0053
ILE 690.0052
LEU 700.0056
GLN 710.0058
TYR 720.0057
CYS 730.0058
GLN 740.0062
GLU 750.0063
VAL 760.0062
TYR 770.0064
PRO 780.0067
GLU 790.0070
LEU 800.0067
GLN 810.0067
ILE 820.0062
THR 830.0062
ASN 840.0057
VAL 850.0054
VAL 860.0050
GLU 870.0047
ALA 880.0047
ASN 890.0044
GLN 900.0042
PRO 910.0042
VAL 920.0044
THR 930.0044
ILE 940.0047
GLN 950.0049
ASN 960.0052
TRP 970.0051
CYS 980.0053
LYS 990.0051
ARG 1000.0053
GLY 1010.0057
ARG 1020.0057
LYS 1030.0060
GLN 1040.0057
CYS 1050.0054
LYS 1060.0052
THR 1070.0048
HIS 1080.0045
PRO 1090.0044
HIS 1100.0042
PHE 1110.0040
VAL 1120.0042
ILE 1130.0043
PRO 1140.0047
TYR 1150.0050
ARG 1160.0053
CYS 1170.0057
LEU 1180.0058
VAL 1190.0062
GLY 1200.0065
GLU 1210.0065
PHE 1220.0061
VAL 1230.0060
SER 1240.0056
ASP 1250.0054
ALA 1260.0054
LEU 1270.0050
LEU 1280.0049
VAL 1290.0047
PRO 1300.0045
ASP 1310.0044
LYS 1320.0042
CYS 1330.0042
LYS 1340.0045
PHE 1350.0048
LEU 1360.0048
HIS 1370.0050
GLN 1380.0049
GLU 1390.0052
ARG 1400.0052
MET 1410.0056
ASP 1420.0054
VAL 1430.0051
CYS 1440.0050
GLU 1450.0047
THR 1460.0045
HIS 1470.0045
LEU 1480.0041
HIS 1490.0041
TRP 1500.0044
HIS 1510.0041
THR 1520.0038
VAL 1530.0041
ALA 1540.0041
LYS 1550.0037
GLU 1560.0036
THR 1570.0040
CYS 1580.0038
SER 1590.0034
GLU 1600.0036
LYS 1610.0037
SER 1620.0033
THR 1630.0035
ASN 1640.0035
LEU 1650.0038
HIS 1660.0040
ASP 1670.0043
TYR 1680.0045
GLY 1690.0049
MET 1700.0050
LEU 1710.0054
LEU 1720.0057
PRO 1730.0056
CYS 1740.0056
GLY 1750.0054
ILE 1760.0053
ASP 1770.0050
LYS 1780.0050
PHE 1790.0051
ARG 1800.0052
GLY 1810.0050
VAL 1820.0048
GLU 1830.0049
PHE 1840.0046
VAL 1850.0044
CYS 1860.0041
CYS 1870.0039
PRO 1880.0036
LEU 1890.0032
ALA 1900.0030
GLU 1910.0028
GLU 1920.0025
SER 1930.0027
ASP 1940.0027
ASN 1950.0026
VAL 1960.0028
ASP 1970.0030
SER 1980.0030
ALA 1990.0028
ASP 2000.0030
ALA 2010.0030
GLU 2020.0028
GLU 2030.0025
ASP 2040.0026
ASP 2050.0023
SER 2060.0024
ASP 2070.0022
VAL 2080.0024
TRP 2090.0021
TRP 2100.0022
GLY 2110.0022
GLY 2120.0026
ALA 2130.0029
ASP 2140.0031
THR 2150.0033
ASP 2160.0033
TYR 2170.0030
ALA 2180.0032
ASP 2190.0035
GLY 2200.0036
SER 2210.0037
GLU 2220.0041
ASP 2230.0043
LYS 2240.0046
VAL 2250.0049
VAL 2260.0054
GLU 2270.0057
VAL 2280.0061
ALA 2290.0064
GLU 2300.0065
GLU 2310.0066
GLU 2320.0066
GLU 2330.0066
VAL 2340.0065
ALA 2350.0063
GLU 2360.0061
VAL 2370.0058
GLU 2380.0055
GLU 2390.0054
GLU 2400.0051
GLU 2410.0048
ALA 2420.0048
ASP 2430.0046
ASP 2440.0046
ASP 2450.0045
GLU 2460.0043
ASP 2470.0041
ASP 2480.0041
GLU 2490.0039
ASP 2500.0035
GLY 2510.0033
ASP 2520.0030
GLU 2530.0026
VAL 2540.0023
GLU 2550.0019
GLU 2560.0016
GLU 2570.0014
ALA 2580.0011
GLU 2590.0011
GLU 2600.0011
PRO 2610.0013
TYR 2620.0017
GLU 2630.0019
GLU 2640.0023
ALA 2650.0025
THR 2660.0028
GLU 2670.0029
ARG 2680.0031
THR 2690.0030
THR 2700.0033
SER 2710.0032
ILE 2720.0035
ALA 2730.0034
THR 2740.0037
THR 2750.0037
THR 2760.0037
THR 2770.0038
THR 2780.0036
THR 2790.0038
THR 2800.0037
GLU 2810.0036
SER 2820.0032
VAL 2830.0030
GLU 2840.0030
GLU 2850.0028
VAL 2860.0025
VAL 2870.0024
ARG 2880.0025
GLU 2890.0021
VAL 2900.0019
CYS 2910.0020
SER 2920.0020
GLU 2930.0016
GLN 2940.0014
ALA 2950.0011
GLU 2960.0008
THR 2970.0007
GLY 2980.0007
PRO 2990.0009
CYS 3000.0011
ARG 3010.0012
ALA 3020.0011
MET 3030.0009
ILE 3040.0008
SER 3050.0007
ARG 3060.0009
TRP 3070.0012
TYR 3080.0014
PHE 3090.0018
ASP 3100.0019
VAL 3110.0023
THR 3120.0025
GLU 3130.0025
GLY 3140.0025
LYS 3150.0022
CYS 3160.0018
ALA 3170.0015
PRO 3180.0012
PHE 3190.0010
PHE 3200.0008
TYR 3210.0007
GLY 3220.0008
GLY 3230.0010
CYS 3240.0011
GLY 3250.0010
GLY 3260.0009
ASN 3270.0011
ARG 3280.0014
ASN 3290.0014
ASN 3300.0012
PHE 3310.0013
ASP 3320.0012
THR 3330.0013
GLU 3340.0015
GLU 3350.0019
TYR 3360.0019
CYS 3370.0018
MET 3380.0021
ALA 3390.0024
VAL 3400.0023
CYS 3410.0023
GLY 3420.0026
SER 3430.0029
ALA 3440.0029
MET 3450.0030
SER 3460.0033
GLN 3470.0036
SER 3480.0035
LEU 3490.0037
LEU 3500.0040
LYS 3510.0042
THR 3520.0042
THR 3530.0047
GLN 3540.0050
GLU 3550.0050
PRO 3560.0049
LEU 3570.0050
ALA 3580.0048
ARG 3590.0046
ASP 3600.0043
PRO 3610.0038
VAL 3620.0036
LYS 3630.0033
LEU 3640.0029
PRO 3650.0027
THR 3660.0024
THR 3670.0021
ALA 3680.0019
ALA 3690.0018
SER 3700.0015
THR 3710.0015
PRO 3720.0014
ASP 3730.0011
ALA 3740.0012
VAL 3750.0010
ASP 3760.0011
LYS 3770.0014
TYR 3780.0013
LEU 3790.0011
GLU 3800.0014
THR 3810.0016
PRO 3820.0016
GLY 3830.0016
ASP 3840.0020
GLU 3850.0023
ASN 3860.0023
GLU 3870.0019
HIS 3880.0020
ALA 3890.0022
HIS 3900.0019
PHE 3910.0016
GLN 3920.0019
LYS 3930.0019
ALA 3940.0015
LYS 3950.0015
GLU 3960.0017
ARG 3970.0015
LEU 3980.0012
GLU 3990.0013
ALA 4000.0014
LYS 4010.0011
HIS 4020.0010
ARG 4030.0012
GLU 4040.0011
ARG 4050.0008
MET 4060.0009
SER 4070.0010
GLN 4080.0008
VAL 4090.0008
MET 4100.0010
ARG 4110.0009
GLU 4120.0007
TRP 4130.0010
GLU 4140.0010
GLU 4150.0008
ALA 4160.0010
GLU 4170.0012
ARG 4180.0011
GLN 4190.0011
ALA 4200.0014
LYS 4210.0015
ASN 4220.0016
LEU 4230.0018
PRO 4240.0022
LYS 4250.0023
ALA 4260.0024
ASP 4270.0020
LYS 4280.0018
LYS 4290.0021
ALA 4300.0019
VAL 4310.0015
ILE 4320.0016
GLN 4330.0018
HIS 4340.0015
PHE 4350.0013
GLN 4360.0015
GLU 4370.0015
LYS 4380.0011
VAL 4390.0012
GLU 4400.0014
SER 4410.0011
LEU 4420.0009
GLU 4430.0011
GLN 4440.0011
GLU 4450.0008
ALA 4460.0009
ALA 4470.0011
ASN 4480.0009
GLU 4490.0008
ARG 4500.0011
GLN 4510.0011
GLN 4520.0008
LEU 4530.0010
VAL 4540.0012
GLU 4550.0010
THR 4560.0010
HIS 4570.0013
MET 4580.0014
ALA 4590.0011
ARG 4600.0013
VAL 4610.0016
GLU 4620.0015
ALA 4630.0014
MET 4640.0017
LEU 4650.0019
ASN 4660.0016
ASP 4670.0017
ARG 4680.0021
ARG 4690.0021
ARG 4700.0019
LEU 4710.0022
ALA 4720.0024
LEU 4730.0023
GLU 4740.0022
ASN 4750.0026
TYR 4760.0027
ILE 4770.0025
THR 4780.0026
ALA 4790.0030
LEU 4800.0029
GLN 4810.0027
ALA 4820.0031
VAL 4830.0033
PRO 4840.0035
PRO 4850.0034
ARG 4860.0037
PRO 4870.0038
ARG 4880.0039
HIS 4890.0036
VAL 4900.0033
PHE 4910.0035
ASN 4920.0035
MET 4930.0031
LEU 4940.0031
LYS 4950.0033
LYS 4960.0030
TYR 4970.0027
VAL 4980.0029
ARG 4990.0029
ALA 5000.0025
GLU 5010.0025
GLN 5020.0028
LYS 5030.0025
ASP 5040.0022
ARG 5050.0025
GLN 5060.0026
HIS 5070.0023
THR 5080.0022
LEU 5090.0026
LYS 5100.0025
HIS 5110.0022
PHE 5120.0024
GLU 5130.0027
HIS 5140.0024
VAL 5150.0022
ARG 5160.0026
MET 5170.0027
VAL 5180.0023
ASP 5190.0024
PRO 5200.0027
LYS 5210.0026
LYS 5220.0023
ALA 5230.0025
ALA 5240.0027
GLN 5250.0025
ILE 5260.0022
ARG 5270.0026
SER 5280.0025
GLN 5290.0022
VAL 5300.0023
MET 5310.0026
THR 5320.0023
HIS 5330.0021
LEU 5340.0025
ARG 5350.0026
VAL 5360.0022
ILE 5370.0023
TYR 5380.0027
GLU 5390.0025
ARG 5400.0022
MET 5410.0026
ASN 5420.0028
GLN 5430.0024
SER 5440.0025
LEU 5450.0029
SER 5460.0028
LEU 5470.0026
LEU 5480.0030
TYR 5490.0030
ASN 5500.0028
VAL 5510.0031
PRO 5520.0035
ALA 5530.0037
VAL 5540.0037
ALA 5550.0036
GLU 5560.0040
GLU 5570.0041
ILE 5580.0040
GLN 5590.0040
ASP 5600.0043
GLU 5610.0041
VAL 5620.0037
ASP 5630.0039
GLU 5640.0041
LEU 5650.0038
LEU 5660.0036
GLN 5670.0039
LYS 5680.0039
GLU 5690.0035
GLN 5700.0036
ASN 5710.0039
TYR 5720.0036
SER 5730.0033
ASP 5740.0036
ASP 5750.0037
VAL 5760.0033
LEU 5770.0033
ALA 5780.0037
ASN 5790.0036
MET 5800.0033
ILE 5810.0036
SER 5820.0039
GLU 5830.0037
PRO 5840.0041
ARG 5850.0041
ILE 5860.0041
SER 5870.0045
TYR 5880.0046
GLY 5890.0050
ASN 5900.0053
ASP 5910.0053
ALA 5920.0053
LEU 5930.0057
MET 5940.0061
PRO 5950.0062
SER 5960.0064
LEU 5970.0068
THR 5980.0070
GLU 5990.0073
THR 6000.0075
LYS 6010.0075
THR 6020.0077
THR 6030.0076
VAL 6040.0076
GLU 6050.0075
LEU 6060.0073
LEU 6070.0069
PRO 6080.0068
VAL 6090.0067
ASN 6100.0067
GLY 6110.0064
GLU 6120.0063
PHE 6130.0060
SER 6140.0059
LEU 6150.0055
ASP 6160.0055
ASP 6170.0054
LEU 6180.0050
GLN 6190.0048
PRO 6200.0047
TRP 6210.0044
HIS 6220.0043
SER 6230.0041
PHE 6240.0039
GLY 6250.0045
ALA 6260.0063
ASP 6270.0081
SER 6280.0113
VAL 6290.0155
PRO 6300.0185
ALA 6310.0226
ASN 6320.0272
THR 6330.0317
GLU 6340.0380
ASN 6350.0430
GLU 6360.0475
VAL 6370.0534
GLU 6380.0557
PRO 6390.0594
VAL 6400.0650
ASP 6410.0684
ALA 6420.0702
ARG 6430.0715
PRO 6440.0713
ALA 6450.0756
ALA 6460.0751
ASP 6470.0762
ARG 6480.0756
GLY 6490.0750
LEU 6500.0734
THR 6510.0710
THR 6520.0691
ARG 6530.0664
PRO 6540.0616
GLY 6550.0598
SER 6560.0567
GLY 6570.0532
LEU 6580.0499
THR 6590.0470
ASN 6600.0429
ILE 6610.0395
LYS 6620.0363
THR 6630.0324
GLU 6640.0292
GLU 6650.0254
ILE 6660.0222
SER 6670.0189
GLU 6680.0156
VAL 6690.0132
LYS 6700.0102
MET 6710.0079
ASP 6720.0051
ALA 6730.0033
GLU 6740.0024
PHE 6750.0017
ARG 6760.0017
HIS 6770.0019
ASP 6780.0019
SER 6790.0019
GLY 6800.0019
TYR 6810.0019
GLU 6820.0021
VAL 6830.0020
HIS 6840.0021
HIS 6850.0022
GLN 6860.0022
LYS 6870.0025
LEU 6880.0024
VAL 6890.0026
PHE 6900.0024
PHE 6910.0025
ALA 6920.0027
GLU 6930.0026
ASP 6940.0026
VAL 6950.0029
GLY 6960.0033
SER 6970.0039
ASN 6980.0042
LYS 6990.0046
GLY 7000.0045
ALA 7010.0042
ILE 7020.0047
ILE 7030.0050
GLY 7040.0046
LEU 7050.0046
MET 7060.0052
VAL 7070.0053
GLY 7080.0049
GLY 7090.0052
VAL 7100.0057
VAL 7110.0055
ILE 7120.0052
ALA 7130.0057
THR 7140.0061
VAL 7150.0057
ILE 7160.0057
VAL 7170.0063
ILE 7180.0064
THR 7190.0060
LEU 7200.0063
VAL 7210.0068
MET 7220.0067
LEU 7230.0064
LYS 7240.0069
LYS 7250.0073
LYS 7260.0070
GLN 7270.0071
TYR 7280.0077
THR 7290.0078
SER 7300.0080
ILE 7310.0076
HIS 7320.0079
HIS 7330.0077
GLY 7340.0075
VAL 7350.0073
VAL 7360.0070
GLU 7370.0069
VAL 7380.0063
ASP 7390.0064
ALA 7400.0062
ALA 7410.0059
VAL 7420.0053
THR 7430.0049
PRO 7440.0044
GLU 7450.0040
GLU 7460.0043
ARG 7470.0043
HIS 7480.0037
LEU 7490.0036
SER 7500.0040
LYS 7510.0036
MET 7520.0031
GLN 7530.0033
GLN 7540.0035
ASN 7550.0029
GLY 7560.0026
TYR 7570.0022
GLU 7580.0023
ASN 7590.0021
PRO 7600.0018
THR 7610.0022
TYR 7620.0027
LYS 7630.0024
PHE 7640.0025
PHE 7650.0031
GLU 7660.0032
GLN 7670.0029
MET 7680.0034
GLN 7690.0039
ASN 7700.0038

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.