CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  Sonic  ***

<R2> analysis for 2405231940243058704

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0747
LYS 390.0083
LEU 400.0066
THR 410.0064
PRO 420.0051
LEU 430.0043
ALA 440.0043
TYR 450.0034
LYS 460.0025
GLN 470.0033
PHE 480.0032
ILE 490.0042
PRO 500.0047
ASN 510.0047
VAL 520.0046
ALA 530.0042
GLU 540.0039
LYS 550.0047
THR 560.0054
LEU 570.0055
GLY 580.0056
ALA 590.0048
SER 600.0046
GLY 610.0052
ARG 620.0055
TYR 630.0050
GLU 640.0053
GLY 650.0054
LYS 660.0053
ILE 670.0060
THR 680.0066
ARG 690.0074
ASN 700.0086
SER 710.0083
GLU 720.0090
ARG 730.0076
PHE 740.0073
LYS 750.0080
GLU 760.0069
LEU 770.0059
THR 780.0056
PRO 790.0048
ASN 800.0038
TYR 810.0035
ASN 820.0024
PRO 830.0017
ASP 840.0006
ILE 850.0009
ILE 860.0016
PHE 870.0024
LYS 880.0031
ASP 890.0040
GLU 900.0046
GLU 910.0054
ASN 920.0058
THR 930.0060
GLY 940.0050
ALA 950.0047
ASP 960.0034
ARG 970.0036
LEU 980.0045
MET 990.0043
THR 1000.0049
GLN 1010.0052
ARG 1020.0049
CYS 1030.0040
LYS 1040.0039
ASP 1050.0044
LYS 1060.0038
LEU 1070.0027
ASN 1080.0029
ALA 1090.0035
LEU 1100.0027
ALA 1110.0018
ILE 1120.0028
SER 1130.0035
VAL 1140.0027
MET 1150.0027
ASN 1160.0040
GLN 1170.0044
TRP 1180.0041
PRO 1190.0037
GLY 1200.0032
VAL 1210.0027
LYS 1220.0013
LEU 1230.0007
ARG 1240.0008
VAL 1250.0011
THR 1260.0019
GLU 1270.0021
GLY 1280.0026
TRP 1290.0037
ASP 1300.0038
GLU 1310.0051
ASP 1320.0049
GLY 1330.0040
HIS 1340.0031
HIS 1350.0023
SER 1360.0023
GLU 1370.0034
GLU 1380.0040
SER 1390.0032
LEU 1400.0036
HIS 1410.0031
TYR 1420.0041
GLU 1430.0046
GLY 1440.0041
ARG 1450.0038
ALA 1460.0028
VAL 1470.0018
ASP 1480.0007
ILE 1490.0001
THR 1500.0014
THR 1510.0021
SER 1520.0023
ASP 1530.0037
ARG 1540.0035
ASP 1550.0043
ARG 1560.0040
SER 1570.0049
LYS 1580.0041
TYR 1590.0031
GLY 1600.0039
MET 1610.0043
LEU 1620.0030
ALA 1630.0029
ARG 1640.0042
LEU 1650.0038
ALA 1660.0031
VAL 1670.0042
GLU 1680.0050
ALA 1690.0041
GLY 1700.0046
PHE 1710.0038
ASP 1720.0043
TRP 1730.0036
VAL 1740.0028
TYR 1750.0021
TYR 1760.0020
GLU 1770.0009
SER 1780.0017
LYS 1790.0029
ALA 1800.0025
HIS 1810.0012
ILE 1820.0011
HIS 1830.0011
CYS 1840.0022
SER 1850.0032
VAL 1860.0042
LYS 1870.0048
ALA 1880.0052
GLU 1890.0044
ASN 1900.0029
SER 1910.0043
VAL 1920.0047
ALA 1930.0041
ALA 1940.0174
LYS 1950.0747

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.