Should you encounter any unexpected behaviour,
please let us know.

* MEMBRANE PROTEIN 23-JUL-98 1BL8 *

<R²> analysis for 22110706074428529

--- normal mode 27 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.0793
ALA 23 0.0237
LEU 24 0.0192
HIS 25 0.0121
TRP 26 0.0091
ARG 27 0.0138
ALA 28 0.0106
ALA 29 0.0119
GLY 30 0.0228
ALA 31 0.0270
ALA 32 0.0218
THR 33 0.0274
VAL 34 0.0351
LEU 35 0.0267
LEU 36 0.0208
VAL 37 0.0240
ILE 38 0.0238
VAL 39 0.0180
LEU 40 0.0141
LEU 41 0.0128
ALA 42 0.0189
GLY 43 0.0169
SER 44 0.0130
TYR 45 0.0173
LEU 46 0.0218
ALA 47 0.0188
VAL 48 0.0163
LEU 49 0.0224
ALA 50 0.0239
GLU 51 0.0200
ARG 52 0.0171
GLY 53 0.0271
ALA 54 0.0310
PRO 55 0.0356
GLY 56 0.0252
ALA 57 0.0168
GLN 58 0.0112
LEU 59 0.0117
ILE 60 0.0114
THR 61 0.0093
TYR 62 0.0112
PRO 63 0.0073
ARG 64 0.0054
ALA 65 0.0084
LEU 66 0.0062
TRP 67 0.0067
TRP 68 0.0098
SER 69 0.0106
VAL 70 0.0097
GLU 71 0.0084
THR 72 0.0094
ALA 73 0.0090
THR 74 0.0087
THR 75 0.0051
VAL 76 0.0033
GLY 77 0.0069
TYR 78 0.0066
GLY 79 0.0078
ASP 80 0.0090
LEU 81 0.0107
TYR 82 0.0125
PRO 83 0.0156
VAL 84 0.0199
THR 85 0.0230
LEU 86 0.0263
TRP 87 0.0266
GLY 88 0.0185
ARG 89 0.0173
CYS 90 0.0197
VAL 91 0.0173
ALA 92 0.0162
VAL 93 0.0135
VAL 94 0.0130
VAL 95 0.0121
MET 96 0.0116
VAL 97 0.0104
ALA 98 0.0124
GLY 99 0.0139
ILE 100 0.0122
THR 101 0.0098
SER 102 0.0125
PHE 103 0.0114
GLY 104 0.0107
LEU 105 0.0074
VAL 106 0.0089
THR 107 0.0064
ALA 108 0.0077
ALA 109 0.0062
LEU 110 0.0038
ALA 111 0.0049
THR 112 0.0072
TRP 113 0.0109
PHE 114 0.0127
VAL 115 0.0174
GLY 116 0.0228
ARG 117 0.0334
GLU 118 0.0422
GLN 119 0.0710
ALA 23 0.0225
LEU 24 0.0187
HIS 25 0.0118
TRP 26 0.0084
ARG 27 0.0134
ALA 28 0.0108
ALA 29 0.0114
GLY 30 0.0202
ALA 31 0.0229
ALA 32 0.0192
THR 33 0.0251
VAL 34 0.0313
LEU 35 0.0243
LEU 36 0.0200
VAL 37 0.0235
ILE 38 0.0233
VAL 39 0.0182
LEU 40 0.0150
LEU 41 0.0139
ALA 42 0.0191
GLY 43 0.0173
SER 44 0.0135
TYR 45 0.0170
LEU 46 0.0214
ALA 47 0.0188
VAL 48 0.0163
LEU 49 0.0218
ALA 50 0.0231
GLU 51 0.0193
ARG 52 0.0166
GLY 53 0.0252
ALA 54 0.0284
PRO 55 0.0323
GLY 56 0.0235
ALA 57 0.0159
GLN 58 0.0110
LEU 59 0.0121
ILE 60 0.0116
THR 61 0.0095
TYR 62 0.0109
PRO 63 0.0065
ARG 64 0.0057
ALA 65 0.0092
LEU 66 0.0074
TRP 67 0.0067
TRP 68 0.0101
SER 69 0.0111
VAL 70 0.0103
GLU 71 0.0086
THR 72 0.0097
ALA 73 0.0092
THR 74 0.0088
THR 75 0.0053
VAL 76 0.0032
GLY 77 0.0067
TYR 78 0.0061
GLY 79 0.0075
ASP 80 0.0086
LEU 81 0.0108
TYR 82 0.0127
PRO 83 0.0155
VAL 84 0.0191
THR 85 0.0220
LEU 86 0.0251
TRP 87 0.0258
GLY 88 0.0184
ARG 89 0.0174
CYS 90 0.0201
VAL 91 0.0175
ALA 92 0.0166
VAL 93 0.0140
VAL 94 0.0135
VAL 95 0.0127
MET 96 0.0121
VAL 97 0.0108
ALA 98 0.0128
GLY 99 0.0142
ILE 100 0.0125
THR 101 0.0101
SER 102 0.0121
PHE 103 0.0107
GLY 104 0.0102
LEU 105 0.0072
VAL 106 0.0078
THR 107 0.0054
ALA 108 0.0069
ALA 109 0.0054
LEU 110 0.0036
ALA 111 0.0053
THR 112 0.0079
TRP 113 0.0124
PHE 114 0.0144
VAL 115 0.0193
GLY 116 0.0251
ARG 117 0.0362
GLU 118 0.0454
GLN 119 0.0772
ALA 23 0.0266
LEU 24 0.0218
HIS 25 0.0133
TRP 26 0.0096
ARG 27 0.0155
ALA 28 0.0133
ALA 29 0.0121
GLY 30 0.0178
ALA 31 0.0180
ALA 32 0.0161
THR 33 0.0216
VAL 34 0.0252
LEU 35 0.0207
LEU 36 0.0182
VAL 37 0.0213
ILE 38 0.0212
VAL 39 0.0171
LEU 40 0.0146
LEU 41 0.0137
ALA 42 0.0175
GLY 43 0.0163
SER 44 0.0130
TYR 45 0.0156
LEU 46 0.0197
ALA 47 0.0181
VAL 48 0.0162
LEU 49 0.0208
ALA 50 0.0222
GLU 51 0.0196
ARG 52 0.0176
GLY 53 0.0263
ALA 54 0.0288
PRO 55 0.0318
GLY 56 0.0233
ALA 57 0.0158
GLN 58 0.0114
LEU 59 0.0129
ILE 60 0.0127
THR 61 0.0099
TYR 62 0.0101
PRO 63 0.0046
ARG 64 0.0061
ALA 65 0.0096
LEU 66 0.0078
TRP 67 0.0069
TRP 68 0.0103
SER 69 0.0111
VAL 70 0.0104
GLU 71 0.0086
THR 72 0.0096
ALA 73 0.0090
THR 74 0.0087
THR 75 0.0050
VAL 76 0.0029
GLY 77 0.0063
TYR 78 0.0057
GLY 79 0.0069
ASP 80 0.0080
LEU 81 0.0105
TYR 82 0.0124
PRO 83 0.0152
VAL 84 0.0183
THR 85 0.0208
LEU 86 0.0230
TRP 87 0.0237
GLY 88 0.0176
ARG 89 0.0165
CYS 90 0.0189
VAL 91 0.0165
ALA 92 0.0160
VAL 93 0.0135
VAL 94 0.0131
VAL 95 0.0125
MET 96 0.0117
VAL 97 0.0105
ALA 98 0.0125
GLY 99 0.0137
ILE 100 0.0120
THR 101 0.0100
SER 102 0.0117
PHE 103 0.0102
GLY 104 0.0099
LEU 105 0.0074
VAL 106 0.0072
THR 107 0.0055
ALA 108 0.0072
ALA 109 0.0060
LEU 110 0.0046
ALA 111 0.0065
THR 112 0.0089
TRP 113 0.0125
PHE 114 0.0143
VAL 115 0.0186
GLY 116 0.0238
ARG 117 0.0326
GLU 118 0.0405
GLN 119 0.0692
ALA 23 0.0241
LEU 24 0.0200
HIS 25 0.0135
TRP 26 0.0101
ARG 27 0.0149
ALA 28 0.0123
ALA 29 0.0125
GLY 30 0.0202
ALA 31 0.0220
ALA 32 0.0185
THR 33 0.0242
VAL 34 0.0295
LEU 35 0.0231
LEU 36 0.0192
VAL 37 0.0222
ILE 38 0.0220
VAL 39 0.0170
LEU 40 0.0138
LEU 41 0.0127
ALA 42 0.0173
GLY 43 0.0158
SER 44 0.0123
TYR 45 0.0156
LEU 46 0.0199
ALA 47 0.0180
VAL 48 0.0161
LEU 49 0.0210
ALA 50 0.0226
GLU 51 0.0198
ARG 52 0.0177
GLY 53 0.0273
ALA 54 0.0303
PRO 55 0.0339
GLY 56 0.0242
ALA 57 0.0161
GLN 58 0.0113
LEU 59 0.0124
ILE 60 0.0124
THR 61 0.0095
TYR 62 0.0100
PRO 63 0.0047
ARG 64 0.0053
ALA 65 0.0088
LEU 66 0.0065
TRP 67 0.0066
TRP 68 0.0098
SER 69 0.0106
VAL 70 0.0098
GLU 71 0.0083
THR 72 0.0092
ALA 73 0.0087
THR 74 0.0085
THR 75 0.0047
VAL 76 0.0028
GLY 77 0.0063
TYR 78 0.0059
GLY 79 0.0069
ASP 80 0.0080
LEU 81 0.0101
TYR 82 0.0119
PRO 83 0.0150
VAL 84 0.0184
THR 85 0.0211
LEU 86 0.0231
TRP 87 0.0239
GLY 88 0.0176
ARG 89 0.0162
CYS 90 0.0184
VAL 91 0.0163
ALA 92 0.0156
VAL 93 0.0131
VAL 94 0.0128
VAL 95 0.0120
MET 96 0.0114
VAL 97 0.0104
ALA 98 0.0124
GLY 99 0.0135
ILE 100 0.0121
THR 101 0.0102
SER 102 0.0125
PHE 103 0.0112
GLY 104 0.0109
LEU 105 0.0083
VAL 106 0.0091
THR 107 0.0070
ALA 108 0.0086
ALA 109 0.0073
LEU 110 0.0043
ALA 111 0.0060
THR 112 0.0085
TRP 113 0.0107
PHE 114 0.0131
VAL 115 0.0185
GLY 116 0.0232
ARG 117 0.0358
GLU 118 0.0466
GLN 119 0.0793

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.

Should you encounter any unexpected behaviour, please let us know.

*** MEMBRANE PROTEIN 23-JUL-98 1BL8 ***

<R2> analysis for 22110706074428529

--- normal mode 27 ---

Should you encounter any unexpected behaviour,
please let us know.

* MEMBRANE PROTEIN 23-JUL-98 1BL8 *

<R²> analysis for 22110706074428529