Should you encounter any unexpected behaviour,
please let us know.

* MEMBRANE PROTEIN 23-JUL-98 1BL8 *

<R²> analysis for 22110706074428529

--- normal mode 16 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.1159
ALA 23 0.0095
LEU 24 0.0089
HIS 25 0.0078
TRP 26 0.0083
ARG 27 0.0083
ALA 28 0.0090
ALA 29 0.0081
GLY 30 0.0037
ALA 31 0.0158
ALA 32 0.0186
THR 33 0.0156
VAL 34 0.0302
LEU 35 0.0316
LEU 36 0.0224
VAL 37 0.0266
ILE 38 0.0340
VAL 39 0.0227
LEU 40 0.0198
LEU 41 0.0245
ALA 42 0.0220
GLY 43 0.0133
SER 44 0.0151
TYR 45 0.0157
LEU 46 0.0062
ALA 47 0.0050
VAL 48 0.0146
LEU 49 0.0133
ALA 50 0.0148
GLU 51 0.0211
ARG 52 0.0275
GLY 53 0.0379
ALA 54 0.0424
PRO 55 0.0464
GLY 56 0.0326
ALA 57 0.0279
GLN 58 0.0283
LEU 59 0.0200
ILE 60 0.0278
THR 61 0.0304
TYR 62 0.0272
PRO 63 0.0343
ARG 64 0.0257
ALA 65 0.0167
LEU 66 0.0222
TRP 67 0.0127
TRP 68 0.0089
SER 69 0.0123
VAL 70 0.0124
GLU 71 0.0084
THR 72 0.0080
ALA 73 0.0100
THR 74 0.0081
THR 75 0.0079
VAL 76 0.0073
GLY 77 0.0078
TYR 78 0.0073
GLY 79 0.0060
ASP 80 0.0073
LEU 81 0.0093
TYR 82 0.0053
PRO 83 0.0107
VAL 84 0.0199
THR 85 0.0227
LEU 86 0.0246
TRP 87 0.0187
GLY 88 0.0108
ARG 89 0.0108
CYS 90 0.0127
VAL 91 0.0085
ALA 92 0.0065
VAL 93 0.0101
VAL 94 0.0127
VAL 95 0.0113
MET 96 0.0098
VAL 97 0.0125
ALA 98 0.0135
GLY 99 0.0071
ILE 100 0.0082
THR 101 0.0104
SER 102 0.0094
PHE 103 0.0068
GLY 104 0.0100
LEU 105 0.0096
VAL 106 0.0079
THR 107 0.0096
ALA 108 0.0092
ALA 109 0.0081
LEU 110 0.0081
ALA 111 0.0078
THR 112 0.0061
TRP 113 0.0051
PHE 114 0.0052
VAL 115 0.0025
GLY 116 0.0109
ARG 117 0.0137
GLU 118 0.0344
GLN 119 0.1159
ALA 23 0.0109
LEU 24 0.0088
HIS 25 0.0068
TRP 26 0.0074
ARG 27 0.0082
ALA 28 0.0091
ALA 29 0.0099
GLY 30 0.0265
ALA 31 0.0339
ALA 32 0.0232
THR 33 0.0285
VAL 34 0.0453
LEU 35 0.0337
LEU 36 0.0201
VAL 37 0.0328
ILE 38 0.0376
VAL 39 0.0202
LEU 40 0.0159
LEU 41 0.0236
ALA 42 0.0265
GLY 43 0.0163
SER 44 0.0120
TYR 45 0.0198
LEU 46 0.0240
ALA 47 0.0168
VAL 48 0.0186
LEU 49 0.0295
ALA 50 0.0298
GLU 51 0.0269
ARG 52 0.0306
GLY 53 0.0468
ALA 54 0.0486
PRO 55 0.0521
GLY 56 0.0339
ALA 57 0.0236
GLN 58 0.0173
LEU 59 0.0129
ILE 60 0.0197
THR 61 0.0122
TYR 62 0.0105
PRO 63 0.0054
ARG 64 0.0039
ALA 65 0.0031
LEU 66 0.0086
TRP 67 0.0076
TRP 68 0.0053
SER 69 0.0045
VAL 70 0.0087
GLU 71 0.0071
THR 72 0.0057
ALA 73 0.0059
THR 74 0.0070
THR 75 0.0073
VAL 76 0.0073
GLY 77 0.0076
TYR 78 0.0064
GLY 79 0.0083
ASP 80 0.0088
LEU 81 0.0102
TYR 82 0.0089
PRO 83 0.0102
VAL 84 0.0178
THR 85 0.0222
LEU 86 0.0181
TRP 87 0.0188
GLY 88 0.0132
ARG 89 0.0050
CYS 90 0.0051
VAL 91 0.0081
ALA 92 0.0027
VAL 93 0.0033
VAL 94 0.0037
VAL 95 0.0027
MET 96 0.0022
VAL 97 0.0027
ALA 98 0.0004
GLY 99 0.0048
ILE 100 0.0072
THR 101 0.0067
SER 102 0.0059
PHE 103 0.0118
GLY 104 0.0114
LEU 105 0.0087
VAL 106 0.0122
THR 107 0.0115
ALA 108 0.0096
ALA 109 0.0093
LEU 110 0.0089
ALA 111 0.0083
THR 112 0.0064
TRP 113 0.0062
PHE 114 0.0052
VAL 115 0.0019
GLY 116 0.0057
ARG 117 0.0088
GLU 118 0.0148
GLN 119 0.0382
ALA 23 0.0059
LEU 24 0.0051
HIS 25 0.0054
TRP 26 0.0040
ARG 27 0.0049
ALA 28 0.0084
ALA 29 0.0075
GLY 30 0.0065
ALA 31 0.0193
ALA 32 0.0199
THR 33 0.0160
VAL 34 0.0301
LEU 35 0.0309
LEU 36 0.0210
VAL 37 0.0246
ILE 38 0.0312
VAL 39 0.0210
LEU 40 0.0181
LEU 41 0.0232
ALA 42 0.0210
GLY 43 0.0134
SER 44 0.0153
TYR 45 0.0181
LEU 46 0.0098
ALA 47 0.0062
VAL 48 0.0149
LEU 49 0.0137
ALA 50 0.0108
GLU 51 0.0177
ARG 52 0.0248
GLY 53 0.0320
ALA 54 0.0350
PRO 55 0.0390
GLY 56 0.0273
ALA 57 0.0236
GLN 58 0.0244
LEU 59 0.0176
ILE 60 0.0253
THR 61 0.0286
TYR 62 0.0269
PRO 63 0.0318
ARG 64 0.0229
ALA 65 0.0154
LEU 66 0.0199
TRP 67 0.0102
TRP 68 0.0068
SER 69 0.0105
VAL 70 0.0101
GLU 71 0.0064
THR 72 0.0068
ALA 73 0.0089
THR 74 0.0076
THR 75 0.0072
VAL 76 0.0064
GLY 77 0.0064
TYR 78 0.0053
GLY 79 0.0045
ASP 80 0.0037
LEU 81 0.0061
TYR 82 0.0042
PRO 83 0.0093
VAL 84 0.0174
THR 85 0.0183
LEU 86 0.0200
TRP 87 0.0135
GLY 88 0.0080
ARG 89 0.0101
CYS 90 0.0112
VAL 91 0.0082
ALA 92 0.0066
VAL 93 0.0101
VAL 94 0.0123
VAL 95 0.0103
MET 96 0.0095
VAL 97 0.0130
ALA 98 0.0132
GLY 99 0.0069
ILE 100 0.0094
THR 101 0.0114
SER 102 0.0098
PHE 103 0.0072
GLY 104 0.0102
LEU 105 0.0093
VAL 106 0.0065
THR 107 0.0083
ALA 108 0.0082
ALA 109 0.0060
LEU 110 0.0059
ALA 111 0.0066
THR 112 0.0052
TRP 113 0.0032
PHE 114 0.0039
VAL 115 0.0022
GLY 116 0.0075
ARG 117 0.0089
GLU 118 0.0211
GLN 119 0.0712
ALA 23 0.0073
LEU 24 0.0062
HIS 25 0.0048
TRP 26 0.0071
ARG 27 0.0093
ALA 28 0.0082
ALA 29 0.0098
GLY 30 0.0250
ALA 31 0.0318
ALA 32 0.0214
THR 33 0.0249
VAL 34 0.0396
LEU 35 0.0296
LEU 36 0.0166
VAL 37 0.0274
ILE 38 0.0316
VAL 39 0.0164
LEU 40 0.0125
LEU 41 0.0194
ALA 42 0.0214
GLY 43 0.0129
SER 44 0.0096
TYR 45 0.0152
LEU 46 0.0181
ALA 47 0.0123
VAL 48 0.0130
LEU 49 0.0211
ALA 50 0.0215
GLU 51 0.0189
ARG 52 0.0209
GLY 53 0.0326
ALA 54 0.0343
PRO 55 0.0369
GLY 56 0.0238
ALA 57 0.0162
GLN 58 0.0111
LEU 59 0.0081
ILE 60 0.0125
THR 61 0.0068
TYR 62 0.0077
PRO 63 0.0060
ARG 64 0.0032
ALA 65 0.0019
LEU 66 0.0075
TRP 67 0.0065
TRP 68 0.0041
SER 69 0.0033
VAL 70 0.0067
GLU 71 0.0051
THR 72 0.0042
ALA 73 0.0051
THR 74 0.0059
THR 75 0.0067
VAL 76 0.0065
GLY 77 0.0057
TYR 78 0.0051
GLY 79 0.0062
ASP 80 0.0067
LEU 81 0.0069
TYR 82 0.0062
PRO 83 0.0073
VAL 84 0.0129
THR 85 0.0163
LEU 86 0.0137
TRP 87 0.0140
GLY 88 0.0098
ARG 89 0.0041
CYS 90 0.0037
VAL 91 0.0063
ALA 92 0.0022
VAL 93 0.0033
VAL 94 0.0030
VAL 95 0.0016
MET 96 0.0026
VAL 97 0.0038
ALA 98 0.0017
GLY 99 0.0048
ILE 100 0.0070
THR 101 0.0061
SER 102 0.0050
PHE 103 0.0100
GLY 104 0.0098
LEU 105 0.0066
VAL 106 0.0105
THR 107 0.0102
ALA 108 0.0082
ALA 109 0.0079
LEU 110 0.0085
ALA 111 0.0081
THR 112 0.0059
TRP 113 0.0059
PHE 114 0.0062
VAL 115 0.0037
GLY 116 0.0054
ARG 117 0.0079
GLU 118 0.0129
GLN 119 0.0258

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.

Should you encounter any unexpected behaviour, please let us know.

*** MEMBRANE PROTEIN 23-JUL-98 1BL8 ***

<R2> analysis for 22110706074428529

--- normal mode 16 ---

Should you encounter any unexpected behaviour,
please let us know.

* MEMBRANE PROTEIN 23-JUL-98 1BL8 *

<R²> analysis for 22110706074428529