CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1PV6  ***

<R2> analysis for 201124180126131909

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0321
MET 10.0101
TYR 20.0094
TYR 30.0090
LEU 40.0094
LYS 50.0094
ASN 60.0090
THR 70.0086
ASN 80.0073
PHE 90.0076
TRP 100.0085
MET 110.0077
PHE 120.0071
GLY 130.0078
LEU 140.0078
PHE 150.0069
PHE 160.0069
PHE 170.0079
PHE 180.0073
TYR 190.0065
PHE 200.0073
PHE 210.0079
ILE 220.0072
MET 230.0066
GLY 240.0078
ALA 250.0084
TYR 260.0070
PHE 270.0064
PRO 280.0082
PHE 290.0094
PHE 300.0085
PRO 310.0093
ILE 320.0113
TRP 330.0112
LEU 340.0116
HIS 350.0135
ASP 360.0149
ILE 370.0142
ASN 380.0137
HIS 390.0152
ILE 400.0136
SER 410.0148
LYS 420.0137
SER 430.0141
ASP 440.0127
THR 450.0109
GLY 460.0107
ILE 470.0107
ILE 480.0093
PHE 490.0076
ALA 500.0083
ALA 510.0082
ILE 520.0064
SER 530.0063
LEU 540.0073
PHE 550.0058
SER 560.0048
LEU 570.0063
LEU 580.0065
PHE 590.0047
GLN 600.0044
PRO 610.0057
LEU 620.0054
PHE 630.0041
GLY 640.0054
LEU 650.0067
LEU 660.0059
SER 670.0057
ASP 680.0076
LYS 690.0081
LEU 700.0072
GLY 710.0073
LEU 720.0068
ARG 730.0070
LYS 740.0060
TYR 750.0055
LEU 760.0042
LEU 770.0042
TRP 780.0045
ILE 790.0036
ILE 800.0036
THR 810.0047
GLY 820.0042
MET 830.0039
LEU 840.0049
VAL 850.0058
MET 860.0060
PHE 870.0064
ALA 880.0083
PRO 890.0081
PHE 900.0068
PHE 910.0082
ILE 920.0102
PHE 930.0100
ILE 940.0089
PHE 950.0095
GLY 960.0120
PRO 970.0128
LEU 980.0121
LEU 990.0129
GLN 1000.0148
TYR 1010.0157
ASN 1020.0158
ILE 1030.0144
LEU 1040.0129
VAL 1050.0122
GLY 1060.0109
SER 1070.0100
ILE 1080.0091
VAL 1090.0086
GLY 1100.0079
GLY 1110.0072
ILE 1120.0058
TYR 1130.0044
LEU 1140.0043
GLY 1150.0047
PHE 1160.0037
CYS 1170.0034
PHE 1180.0038
ASN 1190.0030
ALA 1200.0024
GLY 1210.0032
ALA 1220.0035
PRO 1230.0031
ALA 1240.0034
VAL 1250.0043
GLU 1260.0041
ALA 1270.0041
PHE 1280.0045
ILE 1290.0048
GLU 1300.0045
LYS 1310.0047
VAL 1320.0061
SER 1330.0061
ARG 1340.0062
ARG 1350.0079
SER 1360.0072
ASN 1370.0072
PHE 1380.0073
GLU 1390.0070
PHE 1400.0067
GLY 1410.0083
ARG 1420.0083
ALA 1430.0075
ARG 1440.0078
MET 1450.0084
PHE 1460.0090
GLY 1470.0083
CYS 1480.0089
VAL 1490.0094
GLY 1500.0086
TRP 1510.0089
ALA 1520.0103
LEU 1530.0111
GLY 1540.0104
ALA 1550.0103
SER 1560.0123
ILE 1570.0128
VAL 1580.0117
GLY 1590.0126
ILE 1600.0142
MET 1610.0137
PHE 1620.0126
THR 1630.0144
ILE 1640.0154
ASN 1650.0140
ASN 1660.0121
GLN 1670.0117
PHE 1680.0121
VAL 1690.0109
PHE 1700.0091
TRP 1710.0095
LEU 1720.0099
GLY 1730.0088
SER 1740.0078
GLY 1750.0087
CYS 1760.0088
ALA 1770.0078
LEU 1780.0071
ILE 1790.0079
LEU 1800.0084
ALA 1810.0068
VAL 1820.0069
LEU 1830.0084
LEU 1840.0079
PHE 1850.0072
PHE 1860.0086
ALA 1870.0093
LYS 1880.0083
THR 1890.0085
ASP 1900.0091
ALA 1910.0133
PRO 1920.0137
SER 1930.0159
SER 1940.0158
ALA 1950.0124
THR 1960.0145
VAL 1970.0153
ALA 1980.0144
ASN 1990.0119
ALA 2000.0126
VAL 2010.0135
GLY 2020.0117
ALA 2030.0102
ASN 2040.0115
HIS 2050.0112
SER 2060.0159
ALA 2070.0156
PHE 2080.0160
SER 2090.0179
LEU 2100.0203
LYS 2110.0242
LEU 2120.0221
ALA 2130.0205
LEU 2140.0240
GLU 2150.0252
LEU 2160.0221
PHE 2170.0227
ARG 2180.0260
GLN 2190.0243
PRO 2200.0233
LYS 2210.0206
LEU 2220.0186
TRP 2230.0188
PHE 2240.0174
LEU 2250.0151
SER 2260.0139
LEU 2270.0136
TYR 2280.0111
VAL 2290.0095
ILE 2300.0103
GLY 2310.0101
VAL 2320.0072
SER 2330.0058
CYS 2340.0073
THR 2350.0075
TYR 2360.0046
ASP 2370.0041
VAL 2380.0068
PHE 2390.0069
ASP 2400.0053
GLN 2410.0062
GLN 2420.0088
PHE 2430.0088
ALA 2440.0099
ASN 2450.0121
PHE 2460.0126
PHE 2470.0123
THR 2480.0143
SER 2490.0162
PHE 2500.0164
PHE 2510.0178
ALA 2520.0204
THR 2530.0196
GLY 2540.0174
GLU 2550.0175
GLN 2560.0175
GLY 2570.0156
THR 2580.0138
ARG 2590.0148
VAL 2600.0142
PHE 2610.0119
GLY 2620.0123
TYR 2630.0135
VAL 2640.0115
THR 2650.0097
THR 2660.0118
MET 2670.0129
GLY 2680.0103
GLU 2690.0103
LEU 2700.0130
LEU 2710.0123
ASN 2720.0108
ALA 2730.0139
SER 2740.0148
ILE 2750.0123
MET 2760.0136
PHE 2770.0169
PHE 2780.0159
ALA 2790.0139
PRO 2800.0166
LEU 2810.0182
ILE 2820.0150
ILE 2830.0150
ASN 2840.0182
ARG 2850.0174
ILE 2860.0156
GLY 2870.0164
GLY 2880.0150
LYS 2890.0143
ASN 2900.0121
ALA 2910.0107
LEU 2920.0092
LEU 2930.0082
LEU 2940.0064
ALA 2950.0052
GLY 2960.0046
THR 2970.0035
ILE 2980.0020
MET 2990.0023
SER 3000.0044
VAL 3010.0040
ARG 3020.0048
ILE 3030.0067
ILE 3040.0080
GLY 3050.0080
SER 3060.0099
SER 3070.0121
PHE 3080.0124
ALA 3090.0130
THR 3100.0160
SER 3110.0164
ALA 3120.0156
LEU 3130.0152
GLU 3140.0132
VAL 3150.0117
VAL 3160.0121
ILE 3170.0106
LEU 3180.0084
LYS 3190.0080
THR 3200.0085
LEU 3210.0059
HIS 3220.0049
MET 3230.0069
PHE 3240.0064
GLU 3250.0046
VAL 3260.0063
PRO 3270.0093
PHE 3280.0085
LEU 3290.0076
LEU 3300.0094
VAL 3310.0123
GLY 3320.0119
CYS 3330.0117
PHE 3340.0142
LYS 3350.0164
TYR 3360.0163
ILE 3370.0172
THR 3380.0200
SER 3390.0213
GLN 3400.0217
PHE 3410.0218
GLU 3420.0239
VAL 3430.0223
ARG 3440.0224
PHE 3450.0199
SER 3460.0170
ALA 3470.0149
THR 3480.0157
ILE 3490.0150
TYR 3500.0117
LEU 3510.0116
VAL 3520.0134
CYS 3530.0125
PHE 3540.0093
CYS 3550.0085
PHE 3560.0111
PHE 3570.0114
LYS 3580.0087
GLN 3590.0078
LEU 3600.0107
ALA 3610.0104
MET 3620.0086
ILE 3630.0101
PHE 3640.0121
MET 3650.0110
SER 3660.0100
VAL 3670.0125
LEU 3680.0136
ALA 3690.0119
GLY 3700.0129
ASN 3710.0156
MET 3720.0154
TYR 3730.0146
GLU 3740.0169
SER 3750.0186
ILE 3760.0179
GLY 3770.0166
PHE 3780.0138
GLN 3790.0135
GLY 3800.0152
ALA 3810.0140
TYR 3820.0113
LEU 3830.0121
VAL 3840.0129
LEU 3850.0102
GLY 3860.0085
LEU 3870.0104
VAL 3880.0113
ALA 3890.0083
LEU 3900.0076
GLY 3910.0110
PHE 3920.0111
THR 3930.0087
LEU 3940.0104
ILE 3950.0136
SER 3960.0133
VAL 3970.0128
PHE 3980.0157
THR 3990.0173
LEU 4000.0164
SER 4010.0196
GLY 4020.0210
PRO 4030.0193
GLY 4040.0232
PRO 4050.0253
LEU 4060.0296
SER 4070.0304
LEU 4080.0276
LEU 4090.0301
ARG 4100.0321
ARG 4110.0287
GLN 4120.0271
VAL 4130.0304
ASN 4140.0289
GLU 4150.0259
VAL 4160.0285
ALA 4170.0315
MET 10.0098
TYR 20.0096
TYR 30.0090
LEU 40.0096
LYS 50.0102
ASN 60.0098
THR 70.0099
ASN 80.0092
PHE 90.0090
TRP 100.0096
MET 110.0096
PHE 120.0089
GLY 130.0090
LEU 140.0094
PHE 150.0089
PHE 160.0082
PHE 170.0089
PHE 180.0092
TYR 190.0083
PHE 200.0083
PHE 210.0090
ILE 220.0090
MET 230.0079
GLY 240.0083
ALA 250.0091
TYR 260.0082
PHE 270.0068
PRO 280.0077
PHE 290.0094
PHE 300.0089
PRO 310.0089
ILE 320.0105
TRP 330.0112
LEU 340.0113
HIS 350.0126
ASP 360.0138
ILE 370.0140
ASN 380.0136
HIS 390.0144
ILE 400.0128
SER 410.0139
LYS 420.0127
SER 430.0124
ASP 440.0116
THR 450.0103
GLY 460.0097
ILE 470.0092
ILE 480.0087
PHE 490.0072
ALA 500.0068
ALA 510.0068
ILE 520.0058
SER 530.0047
LEU 540.0046
PHE 550.0041
SER 560.0036
LEU 570.0033
LEU 580.0031
PHE 590.0036
GLN 600.0035
PRO 610.0039
LEU 620.0044
PHE 630.0046
GLY 640.0047
LEU 650.0058
LEU 660.0061
SER 670.0062
ASP 680.0070
LYS 690.0077
LEU 700.0078
GLY 710.0074
LEU 720.0078
ARG 730.0084
LYS 740.0085
TYR 750.0082
LEU 760.0074
LEU 770.0077
TRP 780.0086
ILE 790.0079
ILE 800.0079
THR 810.0093
GLY 820.0094
MET 830.0089
LEU 840.0093
VAL 850.0104
MET 860.0111
PHE 870.0104
ALA 880.0118
PRO 890.0123
PHE 900.0109
PHE 910.0110
ILE 920.0126
PHE 930.0131
ILE 940.0118
PHE 950.0112
GLY 960.0132
PRO 970.0140
LEU 980.0127
LEU 990.0128
GLN 1000.0147
TYR 1010.0157
ASN 1020.0151
ILE 1030.0135
LEU 1040.0120
VAL 1050.0107
GLY 1060.0103
SER 1070.0104
ILE 1080.0089
VAL 1090.0077
GLY 1100.0085
GLY 1110.0086
ILE 1120.0070
TYR 1130.0068
LEU 1140.0080
GLY 1150.0071
PHE 1160.0060
CYS 1170.0067
PHE 1180.0063
ASN 1190.0049
ALA 1200.0046
GLY 1210.0059
ALA 1220.0057
PRO 1230.0050
ALA 1240.0056
VAL 1250.0065
GLU 1260.0059
ALA 1270.0058
PHE 1280.0066
ILE 1290.0069
GLU 1300.0063
LYS 1310.0065
VAL 1320.0074
SER 1330.0071
ARG 1340.0071
ARG 1350.0082
SER 1360.0081
ASN 1370.0078
PHE 1380.0077
GLU 1390.0071
PHE 1400.0070
GLY 1410.0071
ARG 1420.0076
ALA 1430.0076
ARG 1440.0074
MET 1450.0077
PHE 1460.0085
GLY 1470.0081
CYS 1480.0080
VAL 1490.0088
GLY 1500.0088
TRP 1510.0082
ALA 1520.0084
LEU 1530.0097
GLY 1540.0099
ALA 1550.0092
SER 1560.0103
ILE 1570.0114
VAL 1580.0109
GLY 1590.0111
ILE 1600.0124
MET 1610.0123
PHE 1620.0117
THR 1630.0123
ILE 1640.0131
ASN 1650.0128
ASN 1660.0122
GLN 1670.0128
PHE 1680.0130
VAL 1690.0118
PHE 1700.0114
TRP 1710.0120
LEU 1720.0121
GLY 1730.0114
SER 1740.0112
GLY 1750.0118
CYS 1760.0117
ALA 1770.0110
LEU 1780.0109
ILE 1790.0114
LEU 1800.0114
ALA 1810.0106
VAL 1820.0108
LEU 1830.0115
LEU 1840.0109
PHE 1850.0104
PHE 1860.0115
ALA 1870.0114
LYS 1880.0096
THR 1890.0088
ASP 1900.0089
ALA 1910.0118
PRO 1920.0118
SER 1930.0131
SER 1940.0127
ALA 1950.0106
THR 1960.0124
VAL 1970.0133
ALA 1980.0123
ASN 1990.0102
ALA 2000.0103
VAL 2010.0112
GLY 2020.0095
ALA 2030.0081
ASN 2040.0094
HIS 2050.0092
SER 2060.0115
ALA 2070.0105
PHE 2080.0097
SER 2090.0097
LEU 2100.0102
LYS 2110.0134
LEU 2120.0133
ALA 2130.0118
LEU 2140.0137
GLU 2150.0157
LEU 2160.0146
PHE 2170.0147
ARG 2180.0174
GLN 2190.0176
PRO 2200.0181
LYS 2210.0169
LEU 2220.0143
TRP 2230.0150
PHE 2240.0155
LEU 2250.0132
SER 2260.0114
LEU 2270.0127
TYR 2280.0116
VAL 2290.0090
ILE 2300.0091
GLY 2310.0106
VAL 2320.0093
SER 2330.0069
CYS 2340.0075
THR 2350.0091
TYR 2360.0071
ASP 2370.0055
VAL 2380.0074
PHE 2390.0081
ASP 2400.0063
GLN 2410.0066
GLN 2420.0087
PHE 2430.0086
ALA 2440.0089
ASN 2450.0110
PHE 2460.0116
PHE 2470.0103
THR 2480.0121
SER 2490.0139
PHE 2500.0131
PHE 2510.0134
ALA 2520.0153
THR 2530.0155
GLY 2540.0145
GLU 2550.0145
GLN 2560.0135
GLY 2570.0120
THR 2580.0111
ARG 2590.0113
VAL 2600.0100
PHE 2610.0088
GLY 2620.0092
TYR 2630.0089
VAL 2640.0070
THR 2650.0061
THR 2660.0075
MET 2670.0065
GLY 2680.0047
GLU 2690.0049
LEU 2700.0058
LEU 2710.0033
ASN 2720.0036
ALA 2730.0061
SER 2740.0053
ILE 2750.0046
MET 2760.0070
PHE 2770.0092
PHE 2780.0093
ALA 2790.0091
PRO 2800.0125
LEU 2810.0139
ILE 2820.0121
ILE 2830.0131
ASN 2840.0163
ARG 2850.0166
ILE 2860.0157
GLY 2870.0160
GLY 2880.0143
LYS 2890.0151
ASN 2900.0142
ALA 2910.0112
LEU 2920.0105
LEU 2930.0120
LEU 2940.0105
ALA 2950.0080
GLY 2960.0090
THR 2970.0103
ILE 2980.0079
MET 2990.0076
SER 3000.0103
VAL 3010.0098
ARG 3020.0081
ILE 3030.0101
ILE 3040.0122
GLY 3050.0109
SER 3060.0113
SER 3070.0139
PHE 3080.0139
ALA 3090.0126
THR 3100.0139
SER 3110.0124
ALA 3120.0113
LEU 3130.0095
GLU 3140.0094
VAL 3150.0088
VAL 3160.0075
ILE 3170.0064
LEU 3180.0068
LYS 3190.0056
THR 3200.0037
LEU 3210.0040
HIS 3220.0031
MET 3230.0012
PHE 3240.0027
GLU 3250.0040
VAL 3260.0029
PRO 3270.0053
PHE 3280.0069
LEU 3290.0066
LEU 3300.0067
VAL 3310.0092
GLY 3320.0105
CYS 3330.0098
PHE 3340.0111
LYS 3350.0137
TYR 3360.0142
ILE 3370.0139
THR 3380.0162
SER 3390.0182
GLN 3400.0185
PHE 3410.0170
GLU 3420.0180
VAL 3430.0170
ARG 3440.0161
PHE 3450.0139
SER 3460.0122
ALA 3470.0103
THR 3480.0097
ILE 3490.0099
TYR 3500.0077
LEU 3510.0065
VAL 3520.0075
CYS 3530.0082
PHE 3540.0061
CYS 3550.0045
PHE 3560.0055
PHE 3570.0070
LYS 3580.0062
GLN 3590.0050
LEU 3600.0067
ALA 3610.0079
MET 3620.0070
ILE 3630.0075
PHE 3640.0095
MET 3650.0099
SER 3660.0089
VAL 3670.0106
LEU 3680.0120
ALA 3690.0114
GLY 3700.0118
ASN 3710.0140
MET 3720.0146
TYR 3730.0142
GLU 3740.0157
SER 3750.0173
ILE 3760.0176
GLY 3770.0163
PHE 3780.0140
GLN 3790.0144
GLY 3800.0161
ALA 3810.0149
TYR 3820.0132
LEU 3830.0149
VAL 3840.0151
LEU 3850.0125
GLY 3860.0124
LEU 3870.0147
VAL 3880.0144
ALA 3890.0122
LEU 3900.0133
GLY 3910.0160
PHE 3920.0145
THR 3930.0133
LEU 3940.0160
ILE 3950.0173
SER 3960.0160
VAL 3970.0168
PHE 3980.0196
THR 3990.0191
LEU 4000.0171
SER 4010.0191
GLY 4020.0214
PRO 4030.0199
GLY 4040.0229
PRO 4050.0238
LEU 4060.0275
SER 4070.0277
LEU 4080.0255
LEU 4090.0274
ARG 4100.0283
ARG 4110.0249
GLN 4120.0240
VAL 4130.0265
ASN 4140.0245
GLU 4150.0217
VAL 4160.0242
ALA 4170.0267

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.