***  HYDROLASE 05-OCT-15 5E3X  ***
output from eigenvector calculation:
STDOUT:
CUTOFF set to default value (CUTOFF=8)
Build Tirion matrix:
Pdbmat> Computes the Hessian matrix, using an Elastic Network Model.
Pdbmat> Version 3.50, Fevrier 2004.
Pdbmat> Options to be read in pdbmat.dat file.
Pdbmat> Coordinate filename = 240327160220988694.atom
Pdbmat> Distance cutoff = 8.00
Force constant = 10.00
Origin of mass values = CONS
Pdbmat> Levelshift = 1.0E-09
PRINTing level = 2
Pdbmat> Coordinate file 240327160220988694.atom to be opened.
Openam> File opened: 240327160220988694.atom
Pdbmat> Coordinate file in PDB format.
Rdatompdb> Reading pdb file.
Rdatompdb> End of file reached.
Rdatompdb> Number of I/O errors: 0
Rdatompdb> Number of residues found = 489
First residue number = 1
Last residue number = 489
Number of atoms found = 4052
Mean number per residue = 8.3
Pdbmat> Coordinate statistics:
= 20.321921 +/- 11.987831 From: -4.331000 To: 48.063000
= 17.577629 +/- 11.893325 From: -9.866000 To: 46.514000
= 22.489808 +/- 15.176915 From: -13.692000 To: 58.308000
Pdbmat> Masses are all set to one.
Openam> File opened: pdbmat.xyzm
Pdbmat> Coordinates and masses considered are saved.
Openam> File opened: pdbmat.sdijb
Pdbmat> Matrix statistics:
Pdbmat> The matrix is 2.1266 % Filled.
Pdbmat> 1571318 non-zero elements.
Pdbmat> 171914 atom-atom interactions.
Pdbmat> Number per atom= 84.85 +/- 21.83
Maximum number = 136
Minimum number = 16
Pdbmat> Matrix trace = 3.438280E+06
Pdbmat> Larger element = 498.995
Pdbmat> 0 elements larger than +/- 1.0E+10
Pdbmat> Normal end.
automatic determination of NRBL (NRBL = nresidues/200 + 1)
489 non-zero elements, NRBL set to 3
Diagonalize Tirion matrix using diagrtb
Diagrtb> Diagonalizes a matrix, using the RTB/BNM approximation.
Diagrtb> Version 2.52, November 2004.
Diagrtb> Options to be read in diagrtb.dat file.
Diagrtb> Options taken into account:
MATRix filename = pdbmat.sdijb
COORdinates filename = 240327160220988694.atom
Eigenvector OUTPut file = matrix.eigenrtb
Nb of VECTors required = 106
EigeNVALues chosen = LOWE
Type of SUBStructuring = NONE
Nb of residues per BLOck = 3
Origin of MASS values = CONS
MATRix FORMat = BINA
Temporary files cleaning = ALL
Output PRINting level = 2
Diagrtb> Memory allocation for Blocpdb.
Blocpdb> Entering in.
Openam> file on opening on unit 10:
diagrtb_work.xyzm
Blocpdb> Coordinate file 240327160220988694.atom to be opened.
Openam> file on opening on unit 11:
240327160220988694.atom
Blocpdb> Coordinate file in PDB format.
Blocpdb> 4052 atoms picked in pdb file.
Blocpdb> All masses set to unity.
Blocpdb> Coordinate file is rewritten.
Blocpdb> Substructuring:
Blocpdb> 3 residue(s) per block.
Blocpdb> 489 residues.
Blocpdb> 26 atoms in block 1
Block first atom: 1
Blocpdb> 23 atoms in block 2
Block first atom: 27
Blocpdb> 33 atoms in block 3
Block first atom: 50
Blocpdb> 23 atoms in block 4
Block first atom: 83
Blocpdb> 33 atoms in block 5
Block first atom: 106
Blocpdb> 16 atoms in block 6
Block first atom: 139
Blocpdb> 21 atoms in block 7
Block first atom: 155
Blocpdb> 34 atoms in block 8
Block first atom: 176
Blocpdb> 24 atoms in block 9
Block first atom: 210
Blocpdb> 27 atoms in block 10
Block first atom: 234
Blocpdb> 22 atoms in block 11
Block first atom: 261
Blocpdb> 23 atoms in block 12
Block first atom: 283
Blocpdb> 25 atoms in block 13
Block first atom: 306
Blocpdb> 21 atoms in block 14
Block first atom: 331
Blocpdb> 21 atoms in block 15
Block first atom: 352
Blocpdb> 24 atoms in block 16
Block first atom: 373
Blocpdb> 29 atoms in block 17
Block first atom: 397
Blocpdb> 23 atoms in block 18
Block first atom: 426
Blocpdb> 21 atoms in block 19
Block first atom: 449
Blocpdb> 21 atoms in block 20
Block first atom: 470
Blocpdb> 24 atoms in block 21
Block first atom: 491
Blocpdb> 21 atoms in block 22
Block first atom: 515
Blocpdb> 24 atoms in block 23
Block first atom: 536
Blocpdb> 25 atoms in block 24
Block first atom: 560
Blocpdb> 24 atoms in block 25
Block first atom: 585
Blocpdb> 23 atoms in block 26
Block first atom: 609
Blocpdb> 27 atoms in block 27
Block first atom: 632
Blocpdb> 33 atoms in block 28
Block first atom: 659
Blocpdb> 30 atoms in block 29
Block first atom: 692
Blocpdb> 21 atoms in block 30
Block first atom: 722
Blocpdb> 28 atoms in block 31
Block first atom: 743
Blocpdb> 26 atoms in block 32
Block first atom: 771
Blocpdb> 23 atoms in block 33
Block first atom: 797
Blocpdb> 21 atoms in block 34
Block first atom: 820
Blocpdb> 26 atoms in block 35
Block first atom: 841
Blocpdb> 32 atoms in block 36
Block first atom: 867
Blocpdb> 22 atoms in block 37
Block first atom: 899
Blocpdb> 22 atoms in block 38
Block first atom: 921
Blocpdb> 28 atoms in block 39
Block first atom: 943
Blocpdb> 27 atoms in block 40
Block first atom: 971
Blocpdb> 23 atoms in block 41
Block first atom: 998
Blocpdb> 26 atoms in block 42
Block first atom: 1021
Blocpdb> 23 atoms in block 43
Block first atom: 1047
Blocpdb> 26 atoms in block 44
Block first atom: 1070
Blocpdb> 25 atoms in block 45
Block first atom: 1096
Blocpdb> 20 atoms in block 46
Block first atom: 1121
Blocpdb> 25 atoms in block 47
Block first atom: 1141
Blocpdb> 28 atoms in block 48
Block first atom: 1166
Blocpdb> 21 atoms in block 49
Block first atom: 1194
Blocpdb> 24 atoms in block 50
Block first atom: 1215
Blocpdb> 28 atoms in block 51
Block first atom: 1239
Blocpdb> 21 atoms in block 52
Block first atom: 1267
Blocpdb> 23 atoms in block 53
Block first atom: 1288
Blocpdb> 24 atoms in block 54
Block first atom: 1311
Blocpdb> 25 atoms in block 55
Block first atom: 1335
Blocpdb> 27 atoms in block 56
Block first atom: 1360
Blocpdb> 27 atoms in block 57
Block first atom: 1387
Blocpdb> 23 atoms in block 58
Block first atom: 1414
Blocpdb> 26 atoms in block 59
Block first atom: 1437
Blocpdb> 28 atoms in block 60
Block first atom: 1463
Blocpdb> 24 atoms in block 61
Block first atom: 1491
Blocpdb> 23 atoms in block 62
Block first atom: 1515
Blocpdb> 26 atoms in block 63
Block first atom: 1538
Blocpdb> 28 atoms in block 64
Block first atom: 1564
Blocpdb> 19 atoms in block 65
Block first atom: 1592
Blocpdb> 27 atoms in block 66
Block first atom: 1611
Blocpdb> 26 atoms in block 67
Block first atom: 1638
Blocpdb> 30 atoms in block 68
Block first atom: 1664
Blocpdb> 30 atoms in block 69
Block first atom: 1694
Blocpdb> 29 atoms in block 70
Block first atom: 1724
Blocpdb> 26 atoms in block 71
Block first atom: 1753
Blocpdb> 24 atoms in block 72
Block first atom: 1779
Blocpdb> 23 atoms in block 73
Block first atom: 1803
Blocpdb> 21 atoms in block 74
Block first atom: 1826
Blocpdb> 25 atoms in block 75
Block first atom: 1847
Blocpdb> 23 atoms in block 76
Block first atom: 1872
Blocpdb> 20 atoms in block 77
Block first atom: 1895
Blocpdb> 26 atoms in block 78
Block first atom: 1915
Blocpdb> 22 atoms in block 79
Block first atom: 1941
Blocpdb> 31 atoms in block 80
Block first atom: 1963
Blocpdb> 23 atoms in block 81
Block first atom: 1994
Blocpdb> 27 atoms in block 82
Block first atom: 2017
Blocpdb> 26 atoms in block 83
Block first atom: 2044
Blocpdb> 21 atoms in block 84
Block first atom: 2070
Blocpdb> 30 atoms in block 85
Block first atom: 2091
Blocpdb> 19 atoms in block 86
Block first atom: 2121
Blocpdb> 25 atoms in block 87
Block first atom: 2140
Blocpdb> 22 atoms in block 88
Block first atom: 2165
Blocpdb> 23 atoms in block 89
Block first atom: 2187
Blocpdb> 27 atoms in block 90
Block first atom: 2210
Blocpdb> 23 atoms in block 91
Block first atom: 2237
Blocpdb> 16 atoms in block 92
Block first atom: 2260
Blocpdb> 23 atoms in block 93
Block first atom: 2276
Blocpdb> 23 atoms in block 94
Block first atom: 2299
Blocpdb> 24 atoms in block 95
Block first atom: 2322
Blocpdb> 28 atoms in block 96
Block first atom: 2346
Blocpdb> 31 atoms in block 97
Block first atom: 2374
Blocpdb> 18 atoms in block 98
Block first atom: 2405
Blocpdb> 25 atoms in block 99
Block first atom: 2423
Blocpdb> 30 atoms in block 100
Block first atom: 2448
Blocpdb> 21 atoms in block 101
Block first atom: 2478
Blocpdb> 27 atoms in block 102
Block first atom: 2499
Blocpdb> 28 atoms in block 103
Block first atom: 2526
Blocpdb> 22 atoms in block 104
Block first atom: 2554
Blocpdb> 28 atoms in block 105
Block first atom: 2576
Blocpdb> 22 atoms in block 106
Block first atom: 2604
Blocpdb> 25 atoms in block 107
Block first atom: 2626
Blocpdb> 33 atoms in block 108
Block first atom: 2651
Blocpdb> 20 atoms in block 109
Block first atom: 2684
Blocpdb> 27 atoms in block 110
Block first atom: 2704
Blocpdb> 28 atoms in block 111
Block first atom: 2731
Blocpdb> 26 atoms in block 112
Block first atom: 2759
Blocpdb> 22 atoms in block 113
Block first atom: 2785
Blocpdb> 23 atoms in block 114
Block first atom: 2807
Blocpdb> 28 atoms in block 115
Block first atom: 2830
Blocpdb> 26 atoms in block 116
Block first atom: 2858
Blocpdb> 30 atoms in block 117
Block first atom: 2884
Blocpdb> 26 atoms in block 118
Block first atom: 2914
Blocpdb> 28 atoms in block 119
Block first atom: 2940
Blocpdb> 20 atoms in block 120
Block first atom: 2968
Blocpdb> 23 atoms in block 121
Block first atom: 2988
Blocpdb> 24 atoms in block 122
Block first atom: 3011
Blocpdb> 22 atoms in block 123
Block first atom: 3035
Blocpdb> 31 atoms in block 124
Block first atom: 3057
Blocpdb> 29 atoms in block 125
Block first atom: 3088
Blocpdb> 30 atoms in block 126
Block first atom: 3117
Blocpdb> 20 atoms in block 127
Block first atom: 3147
Blocpdb> 22 atoms in block 128
Block first atom: 3167
Blocpdb> 23 atoms in block 129
Block first atom: 3189
Blocpdb> 18 atoms in block 130
Block first atom: 3212
Blocpdb> 25 atoms in block 131
Block first atom: 3230
Blocpdb> 31 atoms in block 132
Block first atom: 3255
Blocpdb> 19 atoms in block 133
Block first atom: 3286
Blocpdb> 23 atoms in block 134
Block first atom: 3305
Blocpdb> 30 atoms in block 135
Block first atom: 3328
Blocpdb> 24 atoms in block 136
Block first atom: 3358
Blocpdb> 20 atoms in block 137
Block first atom: 3382
Blocpdb> 25 atoms in block 138
Block first atom: 3402
Blocpdb> 22 atoms in block 139
Block first atom: 3427
Blocpdb> 29 atoms in block 140
Block first atom: 3449
Blocpdb> 26 atoms in block 141
Block first atom: 3478
Blocpdb> 25 atoms in block 142
Block first atom: 3504
Blocpdb> 29 atoms in block 143
Block first atom: 3529
Blocpdb> 20 atoms in block 144
Block first atom: 3558
Blocpdb> 17 atoms in block 145
Block first atom: 3578
Blocpdb> 28 atoms in block 146
Block first atom: 3595
Blocpdb> 25 atoms in block 147
Block first atom: 3623
Blocpdb> 28 atoms in block 148
Block first atom: 3648
Blocpdb> 26 atoms in block 149
Block first atom: 3676
Blocpdb> 25 atoms in block 150
Block first atom: 3702
Blocpdb> 21 atoms in block 151
Block first atom: 3727
Blocpdb> 28 atoms in block 152
Block first atom: 3748
Blocpdb> 22 atoms in block 153
Block first atom: 3776
Blocpdb> 25 atoms in block 154
Block first atom: 3798
Blocpdb> 18 atoms in block 155
Block first atom: 3823
Blocpdb> 24 atoms in block 156
Block first atom: 3841
Blocpdb> 27 atoms in block 157
Block first atom: 3865
Blocpdb> 24 atoms in block 158
Block first atom: 3892
Blocpdb> 31 atoms in block 159
Block first atom: 3916
Blocpdb> 26 atoms in block 160
Block first atom: 3947
Blocpdb> 27 atoms in block 161
Block first atom: 3973
Blocpdb> 28 atoms in block 162
Block first atom: 4000
Blocpdb> 25 atoms in block 163
Block first atom: 4027
Blocpdb> 163 blocks.
Blocpdb> At most, 34 atoms in each of them.
Blocpdb> At least, 16 atoms in each of them.
Blocpdb> Normal end of Blocpdb.
Diagrtb> Memory allocation for Prepmat.
Diagrtb> Memory allocation for RTB.
Diagrtb> Memory allocation for Diagstd.
Diagrtb> Memory allocation for RTB_to_modes.
Prepmat> Entering in.
Prepmat> Rewriting of the matrix begins.
Prepmat> 1571481 matrix lines read.
Prepmat> Matrix order = 12156
Prepmat> Matrix trace = 3438280.0000
Prepmat> Last element read: 12156 12156 173.4344
Prepmat> 13367 lines saved.
Prepmat> 11674 empty lines.
Prepmat> Number of lines on output is as expected.
Prepmat> Normal end of Prepmat.
RTB> Entering in.
RTB> Number of atoms found in temporary coordinate file: 4052
RTB> Total mass = 4052.0000
RTB> Number of atoms found in matrix: 4052
RTB> Number of blocks = 163
RTB> Projection begins.
RTB> Projected matrix is being saved.
RTB> Projected matrix trace = 216726.8657
RTB> 58467 non-zero elements.
RTB> Normal end of RTB.
Diagstd> Entering in.
Openam> file on opening on unit 10:
diagrtb_work.sdijb
Diagstd> Projected matrix to be read from file: diagrtb_work.sdijb
Diagstd> CERFACS matrix format.
Diagstd> Projected matrix order = 978
Diagstd> Nb of non-zero elements: 58467
Diagstd> Projected matrix trace = 216726.8657
Openam> file on opening on unit 11:
diagrtb_work.eigenfacs
Diagstd> Diagonalization.
Diagstd> 978 eigenvectors are computed.
Diagstd> 106 of them to be saved.
Diagstd> Sum of eigenvalues = 216726.8657
Diagstd> Best zero-eigenvalue found : 0.000000
Diagstd> 6 zero-eigenvalues, that is, below or equal to: 0.0000000
Diagstd> Selected eigenvalues:
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 2.5169980 3.5432085 3.6216145 4.7319281
5.0352857 6.2222820 7.4770291 7.5909820 8.4545987
10.0702624 10.3983649 10.9607727 11.3967630 12.6400520
13.0099321 13.6096404 14.3957179 15.7666772 16.2010802
17.2838438 17.6770144 18.8206774 19.3899862 20.4236786
20.9745249 22.5546481 22.7866578 23.5882899 24.4968923
25.3739468 26.1434771 26.5141430 26.8013598 27.6618847
28.5438645 28.8450382 29.5016550 30.5385017 31.3009146
32.1343517 32.3168909 33.4082599 33.7893245 34.7877872
36.0218056 36.3781706 37.2578444 37.7514008 38.4505017
38.8335211 39.3860110 40.3101812 40.7308813 41.3444343
41.7621940 42.9399580 43.3333797 44.4239154 44.9197451
45.1027287 46.2696690 46.6975223 47.0941005 47.4347337
47.6092149 48.6558748 48.8813955 49.7058348 50.2774166
50.8594839 51.1793619 52.4685828 53.0401524 53.3346243
53.6519685 54.5192235 54.8639748 55.2206696 55.6469600
56.0715644 56.4275894 57.1194358 57.7737190 58.5096190
59.1242823 60.1860886 60.5669881 61.1632100 61.3027629
62.1211529 62.5350727 62.7334233 63.4803966 64.0974807
64.5139226 65.1002662 65.7024969 66.1994126 66.6210535
67.1496845
Diagstd> Frequencies (cm-1, if the input matrix is a hessian in CHARMM units):
0.0034313 0.0034328 0.0034335 0.0034340 0.0034342
0.0034358 172.2807339 204.4059965 206.6552260 236.2187392
243.6729608 270.8757481 296.9339236 299.1880620 315.7488515
344.6003173 350.1690889 359.5140489 366.5945799 386.0732499
391.6812613 400.6070662 412.0139715 431.1867124 437.0863729
451.4560186 456.5619753 471.0997841 478.1718776 490.7522094
497.3262083 515.7192091 518.3649108 527.4041080 537.4657280
547.0024763 555.2351531 559.1574012 562.1778045 571.1315651
580.1651877 583.2178926 589.8186087 600.0938048 607.5384854
615.5736929 617.3196003 627.6567562 631.2262270 640.4845863
651.7454675 654.9614030 662.8330313 667.2088775 673.3584057
676.7038787 681.5006578 689.4498091 693.0382169 698.2385248
701.7572907 711.5838583 714.8362397 723.7751984 727.8031351
729.2840053 738.6581208 742.0654287 745.2097590 747.8999665
749.2742197 757.4656152 759.2190176 765.5947843 769.9841003
774.4283709 776.8599165 786.5837082 790.8564519 793.0487784
795.4046231 801.8074942 804.3386066 806.9490497 810.0577886
813.1424177 815.7198468 820.7052941 825.3923566 830.6324915
834.9841300 842.4484595 845.1100553 849.2595031 850.2278072
855.8842489 858.7309379 860.0917337 865.1971817 869.3922418
872.2118941 876.1665371 880.2098360 883.5321314 886.3413861
889.8509500
Diagstd> Normal end.
Rtb_to_modes> Entering in.
Rtb_to_modes> Number of atoms in temporary block-file = 4052
Rtb_to_modes> Number of blocs = 163
Openam> file on opening on unit 10:
diagrtb_work.eigenfacs
Openam> file on opening on unit 11:
matrix.eigenrtb
Rdmodfacs> Entering in.
Rdmodfacs> Old Blzpack file format detected.
Rdmodfacs> Eigenvector number: 1
Rdmodfacs> Corresponding eigenvalue: 9.9847E-10
Rdmodfacs> Eigenvector number: 2
Rdmodfacs> Corresponding eigenvalue: 9.9931E-10
Rdmodfacs> Eigenvector number: 3
Rdmodfacs> Corresponding eigenvalue: 9.9976E-10
Rdmodfacs> Eigenvector number: 4
Rdmodfacs> Corresponding eigenvalue: 1.0000E-09
Rdmodfacs> Eigenvector number: 5
Rdmodfacs> Corresponding eigenvalue: 1.0002E-09
Rdmodfacs> Eigenvector number: 6
Rdmodfacs> Corresponding eigenvalue: 1.0011E-09
Rdmodfacs> Eigenvector number: 7
Rdmodfacs> Corresponding eigenvalue: 2.517
Rdmodfacs> Eigenvector number: 8
Rdmodfacs> Corresponding eigenvalue: 3.543
Rdmodfacs> Eigenvector number: 9
Rdmodfacs> Corresponding eigenvalue: 3.622
Rdmodfacs> Eigenvector number: 10
Rdmodfacs> Corresponding eigenvalue: 4.732
Rdmodfacs> Eigenvector number: 11
Rdmodfacs> Corresponding eigenvalue: 5.035
Rdmodfacs> Eigenvector number: 12
Rdmodfacs> Corresponding eigenvalue: 6.222
Rdmodfacs> Eigenvector number: 13
Rdmodfacs> Corresponding eigenvalue: 7.477
Rdmodfacs> Eigenvector number: 14
Rdmodfacs> Corresponding eigenvalue: 7.591
Rdmodfacs> Eigenvector number: 15
Rdmodfacs> Corresponding eigenvalue: 8.455
Rdmodfacs> Eigenvector number: 16
Rdmodfacs> Corresponding eigenvalue: 10.07
Rdmodfacs> Eigenvector number: 17
Rdmodfacs> Corresponding eigenvalue: 10.40
Rdmodfacs> Eigenvector number: 18
Rdmodfacs> Corresponding eigenvalue: 10.96
Rdmodfacs> Eigenvector number: 19
Rdmodfacs> Corresponding eigenvalue: 11.40
Rdmodfacs> Eigenvector number: 20
Rdmodfacs> Corresponding eigenvalue: 12.64
Rdmodfacs> Eigenvector number: 21
Rdmodfacs> Corresponding eigenvalue: 13.01
Rdmodfacs> Eigenvector number: 22
Rdmodfacs> Corresponding eigenvalue: 13.61
Rdmodfacs> Eigenvector number: 23
Rdmodfacs> Corresponding eigenvalue: 14.40
Rdmodfacs> Eigenvector number: 24
Rdmodfacs> Corresponding eigenvalue: 15.77
Rdmodfacs> Eigenvector number: 25
Rdmodfacs> Corresponding eigenvalue: 16.20
Rdmodfacs> Eigenvector number: 26
Rdmodfacs> Corresponding eigenvalue: 17.28
Rdmodfacs> Eigenvector number: 27
Rdmodfacs> Corresponding eigenvalue: 17.68
Rdmodfacs> Eigenvector number: 28
Rdmodfacs> Corresponding eigenvalue: 18.82
Rdmodfacs> Eigenvector number: 29
Rdmodfacs> Corresponding eigenvalue: 19.39
Rdmodfacs> Eigenvector number: 30
Rdmodfacs> Corresponding eigenvalue: 20.42
Rdmodfacs> Eigenvector number: 31
Rdmodfacs> Corresponding eigenvalue: 20.97
Rdmodfacs> Eigenvector number: 32
Rdmodfacs> Corresponding eigenvalue: 22.55
Rdmodfacs> Eigenvector number: 33
Rdmodfacs> Corresponding eigenvalue: 22.79
Rdmodfacs> Eigenvector number: 34
Rdmodfacs> Corresponding eigenvalue: 23.59
Rdmodfacs> Eigenvector number: 35
Rdmodfacs> Corresponding eigenvalue: 24.50
Rdmodfacs> Eigenvector number: 36
Rdmodfacs> Corresponding eigenvalue: 25.37
Rdmodfacs> Eigenvector number: 37
Rdmodfacs> Corresponding eigenvalue: 26.14
Rdmodfacs> Eigenvector number: 38
Rdmodfacs> Corresponding eigenvalue: 26.51
Rdmodfacs> Eigenvector number: 39
Rdmodfacs> Corresponding eigenvalue: 26.80
Rdmodfacs> Eigenvector number: 40
Rdmodfacs> Corresponding eigenvalue: 27.66
Rdmodfacs> Eigenvector number: 41
Rdmodfacs> Corresponding eigenvalue: 28.54
Rdmodfacs> Eigenvector number: 42
Rdmodfacs> Corresponding eigenvalue: 28.85
Rdmodfacs> Eigenvector number: 43
Rdmodfacs> Corresponding eigenvalue: 29.50
Rdmodfacs> Eigenvector number: 44
Rdmodfacs> Corresponding eigenvalue: 30.54
Rdmodfacs> Eigenvector number: 45
Rdmodfacs> Corresponding eigenvalue: 31.30
Rdmodfacs> Eigenvector number: 46
Rdmodfacs> Corresponding eigenvalue: 32.13
Rdmodfacs> Eigenvector number: 47
Rdmodfacs> Corresponding eigenvalue: 32.32
Rdmodfacs> Eigenvector number: 48
Rdmodfacs> Corresponding eigenvalue: 33.41
Rdmodfacs> Eigenvector number: 49
Rdmodfacs> Corresponding eigenvalue: 33.79
Rdmodfacs> Eigenvector number: 50
Rdmodfacs> Corresponding eigenvalue: 34.79
Rdmodfacs> Eigenvector number: 51
Rdmodfacs> Corresponding eigenvalue: 36.02
Rdmodfacs> Eigenvector number: 52
Rdmodfacs> Corresponding eigenvalue: 36.38
Rdmodfacs> Eigenvector number: 53
Rdmodfacs> Corresponding eigenvalue: 37.26
Rdmodfacs> Eigenvector number: 54
Rdmodfacs> Corresponding eigenvalue: 37.75
Rdmodfacs> Eigenvector number: 55
Rdmodfacs> Corresponding eigenvalue: 38.45
Rdmodfacs> Eigenvector number: 56
Rdmodfacs> Corresponding eigenvalue: 38.83
Rdmodfacs> Eigenvector number: 57
Rdmodfacs> Corresponding eigenvalue: 39.39
Rdmodfacs> Eigenvector number: 58
Rdmodfacs> Corresponding eigenvalue: 40.31
Rdmodfacs> Eigenvector number: 59
Rdmodfacs> Corresponding eigenvalue: 40.73
Rdmodfacs> Eigenvector number: 60
Rdmodfacs> Corresponding eigenvalue: 41.34
Rdmodfacs> Eigenvector number: 61
Rdmodfacs> Corresponding eigenvalue: 41.76
Rdmodfacs> Eigenvector number: 62
Rdmodfacs> Corresponding eigenvalue: 42.94
Rdmodfacs> Eigenvector number: 63
Rdmodfacs> Corresponding eigenvalue: 43.33
Rdmodfacs> Eigenvector number: 64
Rdmodfacs> Corresponding eigenvalue: 44.42
Rdmodfacs> Eigenvector number: 65
Rdmodfacs> Corresponding eigenvalue: 44.92
Rdmodfacs> Eigenvector number: 66
Rdmodfacs> Corresponding eigenvalue: 45.10
Rdmodfacs> Eigenvector number: 67
Rdmodfacs> Corresponding eigenvalue: 46.27
Rdmodfacs> Eigenvector number: 68
Rdmodfacs> Corresponding eigenvalue: 46.70
Rdmodfacs> Eigenvector number: 69
Rdmodfacs> Corresponding eigenvalue: 47.09
Rdmodfacs> Eigenvector number: 70
Rdmodfacs> Corresponding eigenvalue: 47.43
Rdmodfacs> Eigenvector number: 71
Rdmodfacs> Corresponding eigenvalue: 47.61
Rdmodfacs> Eigenvector number: 72
Rdmodfacs> Corresponding eigenvalue: 48.66
Rdmodfacs> Eigenvector number: 73
Rdmodfacs> Corresponding eigenvalue: 48.88
Rdmodfacs> Eigenvector number: 74
Rdmodfacs> Corresponding eigenvalue: 49.71
Rdmodfacs> Eigenvector number: 75
Rdmodfacs> Corresponding eigenvalue: 50.28
Rdmodfacs> Eigenvector number: 76
Rdmodfacs> Corresponding eigenvalue: 50.86
Rdmodfacs> Eigenvector number: 77
Rdmodfacs> Corresponding eigenvalue: 51.18
Rdmodfacs> Eigenvector number: 78
Rdmodfacs> Corresponding eigenvalue: 52.47
Rdmodfacs> Eigenvector number: 79
Rdmodfacs> Corresponding eigenvalue: 53.04
Rdmodfacs> Eigenvector number: 80
Rdmodfacs> Corresponding eigenvalue: 53.33
Rdmodfacs> Eigenvector number: 81
Rdmodfacs> Corresponding eigenvalue: 53.65
Rdmodfacs> Eigenvector number: 82
Rdmodfacs> Corresponding eigenvalue: 54.52
Rdmodfacs> Eigenvector number: 83
Rdmodfacs> Corresponding eigenvalue: 54.86
Rdmodfacs> Eigenvector number: 84
Rdmodfacs> Corresponding eigenvalue: 55.22
Rdmodfacs> Eigenvector number: 85
Rdmodfacs> Corresponding eigenvalue: 55.65
Rdmodfacs> Eigenvector number: 86
Rdmodfacs> Corresponding eigenvalue: 56.07
Rdmodfacs> Eigenvector number: 87
Rdmodfacs> Corresponding eigenvalue: 56.43
Rdmodfacs> Eigenvector number: 88
Rdmodfacs> Corresponding eigenvalue: 57.12
Rdmodfacs> Eigenvector number: 89
Rdmodfacs> Corresponding eigenvalue: 57.77
Rdmodfacs> Eigenvector number: 90
Rdmodfacs> Corresponding eigenvalue: 58.51
Rdmodfacs> Eigenvector number: 91
Rdmodfacs> Corresponding eigenvalue: 59.12
Rdmodfacs> Eigenvector number: 92
Rdmodfacs> Corresponding eigenvalue: 60.19
Rdmodfacs> Eigenvector number: 93
Rdmodfacs> Corresponding eigenvalue: 60.57
Rdmodfacs> Eigenvector number: 94
Rdmodfacs> Corresponding eigenvalue: 61.16
Rdmodfacs> Eigenvector number: 95
Rdmodfacs> Corresponding eigenvalue: 61.30
Rdmodfacs> Eigenvector number: 96
Rdmodfacs> Corresponding eigenvalue: 62.12
Rdmodfacs> Eigenvector number: 97
Rdmodfacs> Corresponding eigenvalue: 62.54
Rdmodfacs> Eigenvector number: 98
Rdmodfacs> Corresponding eigenvalue: 62.73
Rdmodfacs> Eigenvector number: 99
Rdmodfacs> Corresponding eigenvalue: 63.48
Rdmodfacs> Eigenvector number: 100
Rdmodfacs> Corresponding eigenvalue: 64.10
Rdmodfacs> Eigenvector number: 101
Rdmodfacs> Corresponding eigenvalue: 64.51
Rdmodfacs> Eigenvector number: 102
Rdmodfacs> Corresponding eigenvalue: 65.10
Rdmodfacs> Eigenvector number: 103
Rdmodfacs> Corresponding eigenvalue: 65.70
Rdmodfacs> Eigenvector number: 104
Rdmodfacs> Corresponding eigenvalue: 66.20
Rdmodfacs> Eigenvector number: 105
Rdmodfacs> Corresponding eigenvalue: 66.62
Rdmodfacs> Eigenvector number: 106
Rdmodfacs> Corresponding eigenvalue: 67.15
Rtb_to_modes> 106 vectors, with 978 coordinates in vector file.
Norm of eigenvectors in projected coordinates (one expected):
1.00002 1.00000 1.00001 1.00001 1.00002
1.00000 1.00001 0.99999 0.99996 1.00000
1.00005 1.00000 1.00001 0.99998 1.00001
1.00000 1.00000 0.99998 0.99999 1.00002
0.99997 0.99999 0.99999 0.99999 0.99999
1.00000 1.00001 0.99998 1.00002 1.00001
0.99999 1.00000 1.00000 1.00000 1.00000
1.00001 1.00000 0.99998 0.99999 0.99999
1.00002 1.00002 1.00001 1.00001 1.00001
0.99999 0.99999 1.00000 1.00000 0.99999
0.99998 1.00001 1.00002 1.00001 0.99999
1.00000 1.00002 1.00000 1.00000 0.99999
1.00000 0.99999 1.00000 0.99998 1.00001
1.00001 1.00002 1.00000 1.00002 1.00002
1.00001 1.00000 1.00001 0.99999 1.00000
0.99999 0.99998 0.99998 1.00000 1.00002
1.00001 1.00000 0.99998 1.00000 1.00000
1.00001 0.99998 1.00000 1.00001 1.00001
0.99999 0.99997 1.00000 1.00000 1.00000
1.00000 1.00000 0.99999 1.00000 0.99999
1.00001 1.00000 1.00000 1.00002 0.99999
1.00001
Rtb_to_modes> RTB block-file is being read.
Rtb_to_modes> 72936 lines found in RTB file.
Norm of eigenvectors in cartesian coordinates (one expected):
1.00002 1.00000 1.00001 1.00001 1.00002
1.00000 1.00001 0.99999 0.99996 1.00000
1.00005 1.00000 1.00001 0.99998 1.00001
1.00000 1.00000 0.99998 0.99999 1.00002
0.99997 0.99999 0.99999 0.99999 0.99999
1.00000 1.00001 0.99998 1.00002 1.00001
0.99999 1.00000 1.00000 1.00000 1.00000
1.00001 1.00000 0.99998 0.99999 0.99999
1.00002 1.00002 1.00001 1.00001 1.00001
0.99999 0.99999 1.00000 1.00000 0.99999
0.99998 1.00001 1.00002 1.00001 0.99999
1.00000 1.00002 1.00000 1.00000 0.99999
1.00000 0.99999 1.00000 0.99998 1.00001
1.00001 1.00002 1.00000 1.00002 1.00002
1.00001 1.00000 1.00001 0.99999 1.00000
0.99999 0.99998 0.99998 1.00000 1.00002
1.00001 1.00000 0.99998 1.00000 1.00000
1.00001 0.99998 1.00000 1.00001 1.00001
0.99999 0.99997 1.00000 1.00000 1.00000
1.00000 1.00000 0.99999 1.00000 0.99999
1.00001 1.00000 1.00000 1.00002 0.99999
1.00001
Orthogonality of first eigenvectors (zero expected):
Vector 2: 0.000
Vector 3:-0.000-0.000
Vector 4: 0.000 0.000-0.000
Vector 5: 0.000-0.000 0.000-0.000
Vector 6: 0.000 0.000-0.000-0.000 0.000
Vector 7: 0.000-0.000 0.000 0.000-0.000 0.000
Vector 8:-0.000-0.000 0.000-0.000-0.000-0.000-0.000
Vector 9:-0.000 0.000 0.000 0.000-0.000 0.000 0.000 0.000
Vector 10:-0.000 0.000 0.000 0.000-0.000 0.000-0.000-0.000-0.000
Rtb_to_modes> 106 eigenvectors saved.
Rtb_to_modes> Normal end.
Diagrtb> Normal end.
B-factor analysis
Bfactors> Version 1.22, Bordeaux.
Getnam> Eigenvector filename ?
Getnam> 240327160220988694.eigenfacs
Openam> file on opening on unit 10:
240327160220988694.eigenfacs
Getnam> Corresponding pdb filename ?
Getnam> 240327160220988694.atom
Openam> file on opening on unit 11:
240327160220988694.atom
Getnum> Number of skipped eigenvectors ?
Getnum> 0
Getnum> Number of usefull eigenvectors ?
Getnum> 10000
%Getnum-Err: number larger than 106 This is not allowed. Sorry.
Rdatompdb> Reading pdb file.
Rdatompdb> End of file reached.
Rdatompdb> Number of I/O errors: 0
Rdatompdb> Number of residues found = 489
First residue number = 1
Last residue number = 489
Number of atoms found = 4052
Mean number per residue = 8.3
Rdmodfacs> Old Blzpack file format detected.
Rdmodfacs> Numero du vecteur CERFACS en lecture: 1
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9847E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 2
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9931E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 3
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9976E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 4
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0000E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 5
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0002E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 6
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0011E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 7
Rdmodfacs> Valeur propre du vecteur en lecture: 2.517
Rdmodfacs> Numero du vecteur CERFACS en lecture: 8
Rdmodfacs> Valeur propre du vecteur en lecture: 3.543
Rdmodfacs> Numero du vecteur CERFACS en lecture: 9
Rdmodfacs> Valeur propre du vecteur en lecture: 3.622
Rdmodfacs> Numero du vecteur CERFACS en lecture: 10
Rdmodfacs> Valeur propre du vecteur en lecture: 4.732
Rdmodfacs> Numero du vecteur CERFACS en lecture: 11
Rdmodfacs> Valeur propre du vecteur en lecture: 5.035
Rdmodfacs> Numero du vecteur CERFACS en lecture: 12
Rdmodfacs> Valeur propre du vecteur en lecture: 6.222
Rdmodfacs> Numero du vecteur CERFACS en lecture: 13
Rdmodfacs> Valeur propre du vecteur en lecture: 7.477
Rdmodfacs> Numero du vecteur CERFACS en lecture: 14
Rdmodfacs> Valeur propre du vecteur en lecture: 7.591
Rdmodfacs> Numero du vecteur CERFACS en lecture: 15
Rdmodfacs> Valeur propre du vecteur en lecture: 8.455
Rdmodfacs> Numero du vecteur CERFACS en lecture: 16
Rdmodfacs> Valeur propre du vecteur en lecture: 10.07
Rdmodfacs> Numero du vecteur CERFACS en lecture: 17
Rdmodfacs> Valeur propre du vecteur en lecture: 10.40
Rdmodfacs> Numero du vecteur CERFACS en lecture: 18
Rdmodfacs> Valeur propre du vecteur en lecture: 10.96
Rdmodfacs> Numero du vecteur CERFACS en lecture: 19
Rdmodfacs> Valeur propre du vecteur en lecture: 11.40
Rdmodfacs> Numero du vecteur CERFACS en lecture: 20
Rdmodfacs> Valeur propre du vecteur en lecture: 12.64
Rdmodfacs> Numero du vecteur CERFACS en lecture: 21
Rdmodfacs> Valeur propre du vecteur en lecture: 13.01
Rdmodfacs> Numero du vecteur CERFACS en lecture: 22
Rdmodfacs> Valeur propre du vecteur en lecture: 13.61
Rdmodfacs> Numero du vecteur CERFACS en lecture: 23
Rdmodfacs> Valeur propre du vecteur en lecture: 14.40
Rdmodfacs> Numero du vecteur CERFACS en lecture: 24
Rdmodfacs> Valeur propre du vecteur en lecture: 15.77
Rdmodfacs> Numero du vecteur CERFACS en lecture: 25
Rdmodfacs> Valeur propre du vecteur en lecture: 16.20
Rdmodfacs> Numero du vecteur CERFACS en lecture: 26
Rdmodfacs> Valeur propre du vecteur en lecture: 17.28
Rdmodfacs> Numero du vecteur CERFACS en lecture: 27
Rdmodfacs> Valeur propre du vecteur en lecture: 17.68
Rdmodfacs> Numero du vecteur CERFACS en lecture: 28
Rdmodfacs> Valeur propre du vecteur en lecture: 18.82
Rdmodfacs> Numero du vecteur CERFACS en lecture: 29
Rdmodfacs> Valeur propre du vecteur en lecture: 19.39
Rdmodfacs> Numero du vecteur CERFACS en lecture: 30
Rdmodfacs> Valeur propre du vecteur en lecture: 20.42
Rdmodfacs> Numero du vecteur CERFACS en lecture: 31
Rdmodfacs> Valeur propre du vecteur en lecture: 20.97
Rdmodfacs> Numero du vecteur CERFACS en lecture: 32
Rdmodfacs> Valeur propre du vecteur en lecture: 22.55
Rdmodfacs> Numero du vecteur CERFACS en lecture: 33
Rdmodfacs> Valeur propre du vecteur en lecture: 22.79
Rdmodfacs> Numero du vecteur CERFACS en lecture: 34
Rdmodfacs> Valeur propre du vecteur en lecture: 23.59
Rdmodfacs> Numero du vecteur CERFACS en lecture: 35
Rdmodfacs> Valeur propre du vecteur en lecture: 24.50
Rdmodfacs> Numero du vecteur CERFACS en lecture: 36
Rdmodfacs> Valeur propre du vecteur en lecture: 25.37
Rdmodfacs> Numero du vecteur CERFACS en lecture: 37
Rdmodfacs> Valeur propre du vecteur en lecture: 26.14
Rdmodfacs> Numero du vecteur CERFACS en lecture: 38
Rdmodfacs> Valeur propre du vecteur en lecture: 26.51
Rdmodfacs> Numero du vecteur CERFACS en lecture: 39
Rdmodfacs> Valeur propre du vecteur en lecture: 26.80
Rdmodfacs> Numero du vecteur CERFACS en lecture: 40
Rdmodfacs> Valeur propre du vecteur en lecture: 27.66
Rdmodfacs> Numero du vecteur CERFACS en lecture: 41
Rdmodfacs> Valeur propre du vecteur en lecture: 28.54
Rdmodfacs> Numero du vecteur CERFACS en lecture: 42
Rdmodfacs> Valeur propre du vecteur en lecture: 28.85
Rdmodfacs> Numero du vecteur CERFACS en lecture: 43
Rdmodfacs> Valeur propre du vecteur en lecture: 29.50
Rdmodfacs> Numero du vecteur CERFACS en lecture: 44
Rdmodfacs> Valeur propre du vecteur en lecture: 30.54
Rdmodfacs> Numero du vecteur CERFACS en lecture: 45
Rdmodfacs> Valeur propre du vecteur en lecture: 31.30
Rdmodfacs> Numero du vecteur CERFACS en lecture: 46
Rdmodfacs> Valeur propre du vecteur en lecture: 32.13
Rdmodfacs> Numero du vecteur CERFACS en lecture: 47
Rdmodfacs> Valeur propre du vecteur en lecture: 32.32
Rdmodfacs> Numero du vecteur CERFACS en lecture: 48
Rdmodfacs> Valeur propre du vecteur en lecture: 33.41
Rdmodfacs> Numero du vecteur CERFACS en lecture: 49
Rdmodfacs> Valeur propre du vecteur en lecture: 33.79
Rdmodfacs> Numero du vecteur CERFACS en lecture: 50
Rdmodfacs> Valeur propre du vecteur en lecture: 34.79
Rdmodfacs> Numero du vecteur CERFACS en lecture: 51
Rdmodfacs> Valeur propre du vecteur en lecture: 36.02
Rdmodfacs> Numero du vecteur CERFACS en lecture: 52
Rdmodfacs> Valeur propre du vecteur en lecture: 36.38
Rdmodfacs> Numero du vecteur CERFACS en lecture: 53
Rdmodfacs> Valeur propre du vecteur en lecture: 37.26
Rdmodfacs> Numero du vecteur CERFACS en lecture: 54
Rdmodfacs> Valeur propre du vecteur en lecture: 37.75
Rdmodfacs> Numero du vecteur CERFACS en lecture: 55
Rdmodfacs> Valeur propre du vecteur en lecture: 38.45
Rdmodfacs> Numero du vecteur CERFACS en lecture: 56
Rdmodfacs> Valeur propre du vecteur en lecture: 38.83
Rdmodfacs> Numero du vecteur CERFACS en lecture: 57
Rdmodfacs> Valeur propre du vecteur en lecture: 39.39
Rdmodfacs> Numero du vecteur CERFACS en lecture: 58
Rdmodfacs> Valeur propre du vecteur en lecture: 40.31
Rdmodfacs> Numero du vecteur CERFACS en lecture: 59
Rdmodfacs> Valeur propre du vecteur en lecture: 40.73
Rdmodfacs> Numero du vecteur CERFACS en lecture: 60
Rdmodfacs> Valeur propre du vecteur en lecture: 41.34
Rdmodfacs> Numero du vecteur CERFACS en lecture: 61
Rdmodfacs> Valeur propre du vecteur en lecture: 41.76
Rdmodfacs> Numero du vecteur CERFACS en lecture: 62
Rdmodfacs> Valeur propre du vecteur en lecture: 42.94
Rdmodfacs> Numero du vecteur CERFACS en lecture: 63
Rdmodfacs> Valeur propre du vecteur en lecture: 43.33
Rdmodfacs> Numero du vecteur CERFACS en lecture: 64
Rdmodfacs> Valeur propre du vecteur en lecture: 44.42
Rdmodfacs> Numero du vecteur CERFACS en lecture: 65
Rdmodfacs> Valeur propre du vecteur en lecture: 44.92
Rdmodfacs> Numero du vecteur CERFACS en lecture: 66
Rdmodfacs> Valeur propre du vecteur en lecture: 45.10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 67
Rdmodfacs> Valeur propre du vecteur en lecture: 46.27
Rdmodfacs> Numero du vecteur CERFACS en lecture: 68
Rdmodfacs> Valeur propre du vecteur en lecture: 46.70
Rdmodfacs> Numero du vecteur CERFACS en lecture: 69
Rdmodfacs> Valeur propre du vecteur en lecture: 47.09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 70
Rdmodfacs> Valeur propre du vecteur en lecture: 47.43
Rdmodfacs> Numero du vecteur CERFACS en lecture: 71
Rdmodfacs> Valeur propre du vecteur en lecture: 47.61
Rdmodfacs> Numero du vecteur CERFACS en lecture: 72
Rdmodfacs> Valeur propre du vecteur en lecture: 48.66
Rdmodfacs> Numero du vecteur CERFACS en lecture: 73
Rdmodfacs> Valeur propre du vecteur en lecture: 48.88
Rdmodfacs> Numero du vecteur CERFACS en lecture: 74
Rdmodfacs> Valeur propre du vecteur en lecture: 49.71
Rdmodfacs> Numero du vecteur CERFACS en lecture: 75
Rdmodfacs> Valeur propre du vecteur en lecture: 50.28
Rdmodfacs> Numero du vecteur CERFACS en lecture: 76
Rdmodfacs> Valeur propre du vecteur en lecture: 50.86
Rdmodfacs> Numero du vecteur CERFACS en lecture: 77
Rdmodfacs> Valeur propre du vecteur en lecture: 51.18
Rdmodfacs> Numero du vecteur CERFACS en lecture: 78
Rdmodfacs> Valeur propre du vecteur en lecture: 52.47
Rdmodfacs> Numero du vecteur CERFACS en lecture: 79
Rdmodfacs> Valeur propre du vecteur en lecture: 53.04
Rdmodfacs> Numero du vecteur CERFACS en lecture: 80
Rdmodfacs> Valeur propre du vecteur en lecture: 53.33
Rdmodfacs> Numero du vecteur CERFACS en lecture: 81
Rdmodfacs> Valeur propre du vecteur en lecture: 53.65
Rdmodfacs> Numero du vecteur CERFACS en lecture: 82
Rdmodfacs> Valeur propre du vecteur en lecture: 54.52
Rdmodfacs> Numero du vecteur CERFACS en lecture: 83
Rdmodfacs> Valeur propre du vecteur en lecture: 54.86
Rdmodfacs> Numero du vecteur CERFACS en lecture: 84
Rdmodfacs> Valeur propre du vecteur en lecture: 55.22
Rdmodfacs> Numero du vecteur CERFACS en lecture: 85
Rdmodfacs> Valeur propre du vecteur en lecture: 55.65
Rdmodfacs> Numero du vecteur CERFACS en lecture: 86
Rdmodfacs> Valeur propre du vecteur en lecture: 56.07
Rdmodfacs> Numero du vecteur CERFACS en lecture: 87
Rdmodfacs> Valeur propre du vecteur en lecture: 56.43
Rdmodfacs> Numero du vecteur CERFACS en lecture: 88
Rdmodfacs> Valeur propre du vecteur en lecture: 57.12
Rdmodfacs> Numero du vecteur CERFACS en lecture: 89
Rdmodfacs> Valeur propre du vecteur en lecture: 57.77
Rdmodfacs> Numero du vecteur CERFACS en lecture: 90
Rdmodfacs> Valeur propre du vecteur en lecture: 58.51
Rdmodfacs> Numero du vecteur CERFACS en lecture: 91
Rdmodfacs> Valeur propre du vecteur en lecture: 59.12
Rdmodfacs> Numero du vecteur CERFACS en lecture: 92
Rdmodfacs> Valeur propre du vecteur en lecture: 60.19
Rdmodfacs> Numero du vecteur CERFACS en lecture: 93
Rdmodfacs> Valeur propre du vecteur en lecture: 60.57
Rdmodfacs> Numero du vecteur CERFACS en lecture: 94
Rdmodfacs> Valeur propre du vecteur en lecture: 61.16
Rdmodfacs> Numero du vecteur CERFACS en lecture: 95
Rdmodfacs> Valeur propre du vecteur en lecture: 61.30
Rdmodfacs> Numero du vecteur CERFACS en lecture: 96
Rdmodfacs> Valeur propre du vecteur en lecture: 62.12
Rdmodfacs> Numero du vecteur CERFACS en lecture: 97
Rdmodfacs> Valeur propre du vecteur en lecture: 62.54
Rdmodfacs> Numero du vecteur CERFACS en lecture: 98
Rdmodfacs> Valeur propre du vecteur en lecture: 62.73
Rdmodfacs> Numero du vecteur CERFACS en lecture: 99
Rdmodfacs> Valeur propre du vecteur en lecture: 63.48
Rdmodfacs> Numero du vecteur CERFACS en lecture: 100
Rdmodfacs> Valeur propre du vecteur en lecture: 64.10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 101
Rdmodfacs> Valeur propre du vecteur en lecture: 64.51
Rdmodfacs> Numero du vecteur CERFACS en lecture: 102
Rdmodfacs> Valeur propre du vecteur en lecture: 65.10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 103
Rdmodfacs> Valeur propre du vecteur en lecture: 65.70
Rdmodfacs> Numero du vecteur CERFACS en lecture: 104
Rdmodfacs> Valeur propre du vecteur en lecture: 66.20
Rdmodfacs> Numero du vecteur CERFACS en lecture: 105
Rdmodfacs> Valeur propre du vecteur en lecture: 66.62
Rdmodfacs> Numero du vecteur CERFACS en lecture: 106
Rdmodfacs> Valeur propre du vecteur en lecture: 67.15
Bfactors> 106 vectors, 12156 coordinates in file.
Openam> file on opening on unit 12:
bfactors.pred
Bfactors> Best zero-eigenvalue found : 0.000000
Bfactors> 6 eigenvalues less than : 0.000000
Bfactors> Lowest non-zero eigenvalue : 2.517000
Bfactors> 100 eigenvectors will be considered.
Bfactors> Rotation-Tranlation modes are skipped.
Bfactors> Mass-weighted B-factors are computed.
(CHARMM units assumed for eigenvalues)
Bfactors> Correlation= 0.230 for 489 C-alpha atoms.
Bfactors> = 0.017 +/- 0.02
Bfactors> = 24.658 +/- 11.17
Bfactors> Shiftng-fct= 24.641
Bfactors> Scaling-fct= 678.316
Bfactors> Predicted, Scaled and Experimental B-factors are saved.
Bfactors> Normal end.
check_modes
getting mode 7
running: ../../bin/get_modes.sh 240327160220988694 7 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 7
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 8
running: ../../bin/get_modes.sh 240327160220988694 8 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 8
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 9
running: ../../bin/get_modes.sh 240327160220988694 9 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 9
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 10
running: ../../bin/get_modes.sh 240327160220988694 10 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 10
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 11
running: ../../bin/get_modes.sh 240327160220988694 11 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 11
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 12
running: ../../bin/get_modes.sh 240327160220988694 12 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 12
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 13
running: ../../bin/get_modes.sh 240327160220988694 13 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 13
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 14
running: ../../bin/get_modes.sh 240327160220988694 14 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 14
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 15
running: ../../bin/get_modes.sh 240327160220988694 15 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 15
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 16
running: ../../bin/get_modes.sh 240327160220988694 16 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 16
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 17
running: ../../bin/get_modes.sh 240327160220988694 17 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 17
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 18
running: ../../bin/get_modes.sh 240327160220988694 18 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 18
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 19
running: ../../bin/get_modes.sh 240327160220988694 19 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 19
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 20
running: ../../bin/get_modes.sh 240327160220988694 20 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 20
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 21
running: ../../bin/get_modes.sh 240327160220988694 21 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 21
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 22
running: ../../bin/get_modes.sh 240327160220988694 22 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 22
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 23
running: ../../bin/get_modes.sh 240327160220988694 23 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 23
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 24
running: ../../bin/get_modes.sh 240327160220988694 24 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 24
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 25
running: ../../bin/get_modes.sh 240327160220988694 25 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 25
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 26
running: ../../bin/get_modes.sh 240327160220988694 26 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 26
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 27
running: ../../bin/get_modes.sh 240327160220988694 27 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 27
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 28
running: ../../bin/get_modes.sh 240327160220988694 28 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 28
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 29
running: ../../bin/get_modes.sh 240327160220988694 29 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 29
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 30
running: ../../bin/get_modes.sh 240327160220988694 30 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 30
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 31
running: ../../bin/get_modes.sh 240327160220988694 31 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 31
calculating perturbed structure for DQ=-100
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=-20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=0
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=20
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=40
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=60
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=80
240327160220988694.eigenfacs
240327160220988694.atom
calculating perturbed structure for DQ=100
240327160220988694.eigenfacs
240327160220988694.atom
making animated gifs
11 models are in 240327160220988694.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 240327160220988694.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
240327160220988694.10.pdb
240327160220988694.11.pdb
240327160220988694.12.pdb
240327160220988694.13.pdb
240327160220988694.14.pdb
240327160220988694.15.pdb
240327160220988694.16.pdb
240327160220988694.17.pdb
240327160220988694.18.pdb
240327160220988694.19.pdb
240327160220988694.20.pdb
240327160220988694.21.pdb
240327160220988694.22.pdb
240327160220988694.23.pdb
240327160220988694.24.pdb
240327160220988694.25.pdb
240327160220988694.26.pdb
240327160220988694.27.pdb
240327160220988694.28.pdb
240327160220988694.29.pdb
240327160220988694.30.pdb
240327160220988694.31.pdb
240327160220988694.7.pdb
240327160220988694.8.pdb
240327160220988694.9.pdb
STDERR:
Note: The following floating-point exceptions are signalling: IEEE_DENORMAL
real 0m18.468s
user 0m18.404s
sys 0m0.064s
../../bin/check_modes: error while loading shared libraries: libgfortran.so.3: cannot open shared object file: No such file or directory
mv: cannot stat 'Chkmod.res': No such file or directory
cat: 240327160220988694.Chkmod.res: No such file or directory
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If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.
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