Should you encounter any unexpected behaviour,
please let us know.

STDOUT:

CUTOFF set to default value (CUTOFF=8)
Build Tirion matrix:
 Pdbmat> Computes the Hessian matrix, using an Elastic Network Model.
 Pdbmat> Version 3.50, Fevrier 2004.    

 Pdbmat> Options to be read in pdbmat.dat file.

 Pdbmat> Coordinate filename     = 23011717532984182.atom

 Pdbmat> Distance cutoff         =       8.00
         Force constant          =      10.00
         Origin of mass values   =       CONS
 Pdbmat> Levelshift              =    1.0E-09
         PRINTing level          =          2

 Pdbmat> Coordinate file 23011717532984182.atom to be opened.

 Openam> File opened: 23011717532984182.atom

 Pdbmat> Coordinate file in PDB format.

 Rdatompdb> Reading pdb file.
 Rdatompdb> End of file reached.
 Rdatompdb> Number of I/O errors:      0

 Rdatompdb> Number of residues found =   4455
            First residue number     =     13
            Last  residue number     =    309
            Number of atoms found    =  68385
            Mean number per residue  =     15.4

 Pdbmat> Coordinate statistics: 
 =    15.902445 +/-    10.973133 From:   -15.047000 To:    46.975000
 =    20.599407 +/-    16.988874 From:   -19.564000 To:    61.213000
 =    23.116000 +/-    11.709327 From:    -5.339000 To:    52.130000
 Pdbmat> Masses are all set to one.

 Openam> File opened: pdbmat.xyzm
 Pdbmat> Coordinates and masses considered are saved.

 Openam> File opened: pdbmat.sdijb

 Pdbmat> Matrix statistics:

 Pdbmat> The matrix is ******** % Filled.
 Pdbmat>    521735242  non-zero elements.
 Pdbmat>     57934920 atom-atom interactions.

 Pdbmat> Number per atom=   1694.38 +/-    465.12
         Maximum number =   2874
         Minimum number =    144

 Pdbmat> Matrix trace   = 1.158698E+09
 Pdbmat> Larger element =  11620.9    
 Pdbmat>      0 elements larger than +/-  1.0E+10

 Pdbmat> Normal end.
automatic determination of NRBL (NRBL = nresidues/200 + 1)
4455 non-zero elements, NRBL set to 23
Diagonalize Tirion matrix using diagrtb
 Diagrtb> Diagonalizes a matrix, using the RTB/BNM approximation.
 Diagrtb> Version 2.52, November 2004. 
 Diagrtb> Options to be read in diagrtb.dat file.

 Diagrtb> Options taken into account:

 MATRix filename          = pdbmat.sdijb
 COORdinates filename     = 23011717532984182.atom
 Eigenvector OUTPut file  = matrix.eigenrtb
 Nb of VECTors required   =        106
 EigeNVALues chosen       =       LOWE
 Type of SUBStructuring   =       NONE
 Nb of residues per BLOck =         23
 Origin of MASS values    =       CONS
 MATRix FORMat            =       BINA
 Temporary files cleaning =       ALL 
 Output PRINting level    =          2

 Diagrtb> Memory allocation for Blocpdb.

 Blocpdb> Entering in.

 Openam> file on opening on unit     10:
 diagrtb_work.xyzm   

 Blocpdb> Coordinate file 23011717532984182.atom to be opened.

 Openam> file on opening on unit     11:
 23011717532984182.atom                                                                                                          

 Blocpdb> Coordinate file in PDB format.

 Blocpdb> 68385 atoms picked in pdb file.
 Blocpdb>   All masses set to unity.
 Blocpdb> Coordinate file is rewritten.

 Blocpdb> Substructuring:
 Blocpdb>    23 residue(s) per block.
 Blocpdb>  4455 residues.
 Blocpdb>   334 atoms in block      1
 Block first atom:      1
 Blocpdb>   346 atoms in block      2
 Block first atom:    335
 Blocpdb>   363 atoms in block      3
 Block first atom:    681
 Blocpdb>   365 atoms in block      4
 Block first atom:   1044
 Blocpdb>   323 atoms in block      5
 Block first atom:   1409
 Blocpdb>   350 atoms in block      6
 Block first atom:   1732
 Blocpdb>   363 atoms in block      7
 Block first atom:   2082
 Blocpdb>   340 atoms in block      8
 Block first atom:   2445
 Blocpdb>   372 atoms in block      9
 Block first atom:   2785
 Blocpdb>   335 atoms in block     10
 Block first atom:   3157
 Blocpdb>   336 atoms in block     11
 Block first atom:   3492
 Blocpdb>   387 atoms in block     12
 Block first atom:   3828
 Blocpdb>   345 atoms in block     13
 Block first atom:   4215
 Blocpdb>   334 atoms in block     14
 Block first atom:   4560
 Blocpdb>   346 atoms in block     15
 Block first atom:   4894
 Blocpdb>   363 atoms in block     16
 Block first atom:   5240
 Blocpdb>   365 atoms in block     17
 Block first atom:   5603
 Blocpdb>   323 atoms in block     18
 Block first atom:   5968
 Blocpdb>   350 atoms in block     19
 Block first atom:   6291
 Blocpdb>   363 atoms in block     20
 Block first atom:   6641
 Blocpdb>   340 atoms in block     21
 Block first atom:   7004
 Blocpdb>   372 atoms in block     22
 Block first atom:   7344
 Blocpdb>   335 atoms in block     23
 Block first atom:   7716
 Blocpdb>   336 atoms in block     24
 Block first atom:   8051
 Blocpdb>   387 atoms in block     25
 Block first atom:   8387
 Blocpdb>   345 atoms in block     26
 Block first atom:   8774
 Blocpdb>   334 atoms in block     27
 Block first atom:   9119
 Blocpdb>   346 atoms in block     28
 Block first atom:   9453
 Blocpdb>   363 atoms in block     29
 Block first atom:   9799
 Blocpdb>   365 atoms in block     30
 Block first atom:  10162
 Blocpdb>   323 atoms in block     31
 Block first atom:  10527
 Blocpdb>   350 atoms in block     32
 Block first atom:  10850
 Blocpdb>   363 atoms in block     33
 Block first atom:  11200
 Blocpdb>   340 atoms in block     34
 Block first atom:  11563
 Blocpdb>   372 atoms in block     35
 Block first atom:  11903
 Blocpdb>   335 atoms in block     36
 Block first atom:  12275
 Blocpdb>   336 atoms in block     37
 Block first atom:  12610
 Blocpdb>   387 atoms in block     38
 Block first atom:  12946
 Blocpdb>   345 atoms in block     39
 Block first atom:  13333
 Blocpdb>   334 atoms in block     40
 Block first atom:  13678
 Blocpdb>   346 atoms in block     41
 Block first atom:  14012
 Blocpdb>   363 atoms in block     42
 Block first atom:  14358
 Blocpdb>   365 atoms in block     43
 Block first atom:  14721
 Blocpdb>   323 atoms in block     44
 Block first atom:  15086
 Blocpdb>   350 atoms in block     45
 Block first atom:  15409
 Blocpdb>   363 atoms in block     46
 Block first atom:  15759
 Blocpdb>   340 atoms in block     47
 Block first atom:  16122
 Blocpdb>   372 atoms in block     48
 Block first atom:  16462
 Blocpdb>   335 atoms in block     49
 Block first atom:  16834
 Blocpdb>   336 atoms in block     50
 Block first atom:  17169
 Blocpdb>   387 atoms in block     51
 Block first atom:  17505
 Blocpdb>   345 atoms in block     52
 Block first atom:  17892
 Blocpdb>   334 atoms in block     53
 Block first atom:  18237
 Blocpdb>   346 atoms in block     54
 Block first atom:  18571
 Blocpdb>   363 atoms in block     55
 Block first atom:  18917
 Blocpdb>   365 atoms in block     56
 Block first atom:  19280
 Blocpdb>   323 atoms in block     57
 Block first atom:  19645
 Blocpdb>   350 atoms in block     58
 Block first atom:  19968
 Blocpdb>   363 atoms in block     59
 Block first atom:  20318
 Blocpdb>   340 atoms in block     60
 Block first atom:  20681
 Blocpdb>   372 atoms in block     61
 Block first atom:  21021
 Blocpdb>   335 atoms in block     62
 Block first atom:  21393
 Blocpdb>   336 atoms in block     63
 Block first atom:  21728
 Blocpdb>   387 atoms in block     64
 Block first atom:  22064
 Blocpdb>   345 atoms in block     65
 Block first atom:  22451
 Blocpdb>   334 atoms in block     66
 Block first atom:  22796
 Blocpdb>   346 atoms in block     67
 Block first atom:  23130
 Blocpdb>   363 atoms in block     68
 Block first atom:  23476
 Blocpdb>   365 atoms in block     69
 Block first atom:  23839
 Blocpdb>   323 atoms in block     70
 Block first atom:  24204
 Blocpdb>   350 atoms in block     71
 Block first atom:  24527
 Blocpdb>   363 atoms in block     72
 Block first atom:  24877
 Blocpdb>   340 atoms in block     73
 Block first atom:  25240
 Blocpdb>   372 atoms in block     74
 Block first atom:  25580
 Blocpdb>   335 atoms in block     75
 Block first atom:  25952
 Blocpdb>   336 atoms in block     76
 Block first atom:  26287
 Blocpdb>   387 atoms in block     77
 Block first atom:  26623
 Blocpdb>   345 atoms in block     78
 Block first atom:  27010
 Blocpdb>   334 atoms in block     79
 Block first atom:  27355
 Blocpdb>   346 atoms in block     80
 Block first atom:  27689
 Blocpdb>   363 atoms in block     81
 Block first atom:  28035
 Blocpdb>   365 atoms in block     82
 Block first atom:  28398
 Blocpdb>   323 atoms in block     83
 Block first atom:  28763
 Blocpdb>   350 atoms in block     84
 Block first atom:  29086
 Blocpdb>   363 atoms in block     85
 Block first atom:  29436
 Blocpdb>   340 atoms in block     86
 Block first atom:  29799
 Blocpdb>   372 atoms in block     87
 Block first atom:  30139
 Blocpdb>   335 atoms in block     88
 Block first atom:  30511
 Blocpdb>   336 atoms in block     89
 Block first atom:  30846
 Blocpdb>   387 atoms in block     90
 Block first atom:  31182
 Blocpdb>   345 atoms in block     91
 Block first atom:  31569
 Blocpdb>   334 atoms in block     92
 Block first atom:  31914
 Blocpdb>   346 atoms in block     93
 Block first atom:  32248
 Blocpdb>   363 atoms in block     94
 Block first atom:  32594
 Blocpdb>   365 atoms in block     95
 Block first atom:  32957
 Blocpdb>   323 atoms in block     96
 Block first atom:  33322
 Blocpdb>   350 atoms in block     97
 Block first atom:  33645
 Blocpdb>   363 atoms in block     98
 Block first atom:  33995
 Blocpdb>   340 atoms in block     99
 Block first atom:  34358
 Blocpdb>   372 atoms in block    100
 Block first atom:  34698
 Blocpdb>   335 atoms in block    101
 Block first atom:  35070
 Blocpdb>   336 atoms in block    102
 Block first atom:  35405
 Blocpdb>   387 atoms in block    103
 Block first atom:  35741
 Blocpdb>   345 atoms in block    104
 Block first atom:  36128
 Blocpdb>   334 atoms in block    105
 Block first atom:  36473
 Blocpdb>   346 atoms in block    106
 Block first atom:  36807
 Blocpdb>   363 atoms in block    107
 Block first atom:  37153
 Blocpdb>   365 atoms in block    108
 Block first atom:  37516
 Blocpdb>   323 atoms in block    109
 Block first atom:  37881
 Blocpdb>   350 atoms in block    110
 Block first atom:  38204
 Blocpdb>   363 atoms in block    111
 Block first atom:  38554
 Blocpdb>   340 atoms in block    112
 Block first atom:  38917
 Blocpdb>   372 atoms in block    113
 Block first atom:  39257
 Blocpdb>   335 atoms in block    114
 Block first atom:  39629
 Blocpdb>   336 atoms in block    115
 Block first atom:  39964
 Blocpdb>   387 atoms in block    116
 Block first atom:  40300
 Blocpdb>   345 atoms in block    117
 Block first atom:  40687
 Blocpdb>   334 atoms in block    118
 Block first atom:  41032
 Blocpdb>   346 atoms in block    119
 Block first atom:  41366
 Blocpdb>   363 atoms in block    120
 Block first atom:  41712
 Blocpdb>   365 atoms in block    121
 Block first atom:  42075
 Blocpdb>   323 atoms in block    122
 Block first atom:  42440
 Blocpdb>   350 atoms in block    123
 Block first atom:  42763
 Blocpdb>   363 atoms in block    124
 Block first atom:  43113
 Blocpdb>   340 atoms in block    125
 Block first atom:  43476
 Blocpdb>   372 atoms in block    126
 Block first atom:  43816
 Blocpdb>   335 atoms in block    127
 Block first atom:  44188
 Blocpdb>   336 atoms in block    128
 Block first atom:  44523
 Blocpdb>   387 atoms in block    129
 Block first atom:  44859
 Blocpdb>   345 atoms in block    130
 Block first atom:  45246
 Blocpdb>   334 atoms in block    131
 Block first atom:  45591
 Blocpdb>   346 atoms in block    132
 Block first atom:  45925
 Blocpdb>   363 atoms in block    133
 Block first atom:  46271
 Blocpdb>   365 atoms in block    134
 Block first atom:  46634
 Blocpdb>   323 atoms in block    135
 Block first atom:  46999
 Blocpdb>   350 atoms in block    136
 Block first atom:  47322
 Blocpdb>   363 atoms in block    137
 Block first atom:  47672
 Blocpdb>   340 atoms in block    138
 Block first atom:  48035
 Blocpdb>   372 atoms in block    139
 Block first atom:  48375
 Blocpdb>   335 atoms in block    140
 Block first atom:  48747
 Blocpdb>   336 atoms in block    141
 Block first atom:  49082
 Blocpdb>   387 atoms in block    142
 Block first atom:  49418
 Blocpdb>   345 atoms in block    143
 Block first atom:  49805
 Blocpdb>   334 atoms in block    144
 Block first atom:  50150
 Blocpdb>   346 atoms in block    145
 Block first atom:  50484
 Blocpdb>   363 atoms in block    146
 Block first atom:  50830
 Blocpdb>   365 atoms in block    147
 Block first atom:  51193
 Blocpdb>   323 atoms in block    148
 Block first atom:  51558
 Blocpdb>   350 atoms in block    149
 Block first atom:  51881
 Blocpdb>   363 atoms in block    150
 Block first atom:  52231
 Blocpdb>   340 atoms in block    151
 Block first atom:  52594
 Blocpdb>   372 atoms in block    152
 Block first atom:  52934
 Blocpdb>   335 atoms in block    153
 Block first atom:  53306
 Blocpdb>   336 atoms in block    154
 Block first atom:  53641
 Blocpdb>   387 atoms in block    155
 Block first atom:  53977
 Blocpdb>   345 atoms in block    156
 Block first atom:  54364
 Blocpdb>   334 atoms in block    157
 Block first atom:  54709
 Blocpdb>   346 atoms in block    158
 Block first atom:  55043
 Blocpdb>   363 atoms in block    159
 Block first atom:  55389
 Blocpdb>   365 atoms in block    160
 Block first atom:  55752
 Blocpdb>   323 atoms in block    161
 Block first atom:  56117
 Blocpdb>   350 atoms in block    162
 Block first atom:  56440
 Blocpdb>   363 atoms in block    163
 Block first atom:  56790
 Blocpdb>   340 atoms in block    164
 Block first atom:  57153
 Blocpdb>   372 atoms in block    165
 Block first atom:  57493
 Blocpdb>   335 atoms in block    166
 Block first atom:  57865
 Blocpdb>   336 atoms in block    167
 Block first atom:  58200
 Blocpdb>   387 atoms in block    168
 Block first atom:  58536
 Blocpdb>   345 atoms in block    169
 Block first atom:  58923
 Blocpdb>   334 atoms in block    170
 Block first atom:  59268
 Blocpdb>   346 atoms in block    171
 Block first atom:  59602
 Blocpdb>   363 atoms in block    172
 Block first atom:  59948
 Blocpdb>   365 atoms in block    173
 Block first atom:  60311
 Blocpdb>   323 atoms in block    174
 Block first atom:  60676
 Blocpdb>   350 atoms in block    175
 Block first atom:  60999
 Blocpdb>   363 atoms in block    176
 Block first atom:  61349
 Blocpdb>   340 atoms in block    177
 Block first atom:  61712
 Blocpdb>   372 atoms in block    178
 Block first atom:  62052
 Blocpdb>   335 atoms in block    179
 Block first atom:  62424
 Blocpdb>   336 atoms in block    180
 Block first atom:  62759
 Blocpdb>   387 atoms in block    181
 Block first atom:  63095
 Blocpdb>   345 atoms in block    182
 Block first atom:  63482
 Blocpdb>   334 atoms in block    183
 Block first atom:  63827
 Blocpdb>   346 atoms in block    184
 Block first atom:  64161
 Blocpdb>   363 atoms in block    185
 Block first atom:  64507
 Blocpdb>   365 atoms in block    186
 Block first atom:  64870
 Blocpdb>   323 atoms in block    187
 Block first atom:  65235
 Blocpdb>   350 atoms in block    188
 Block first atom:  65558
 Blocpdb>   363 atoms in block    189
 Block first atom:  65908
 Blocpdb>   340 atoms in block    190
 Block first atom:  66271
 Blocpdb>   372 atoms in block    191
 Block first atom:  66611
 Blocpdb>   335 atoms in block    192
 Block first atom:  66983
 Blocpdb>   336 atoms in block    193
 Block first atom:  67318
 Blocpdb>   387 atoms in block    194
 Block first atom:  67654
 Blocpdb>   345 atoms in block    195
 Block first atom:  68040

 Blocpdb>   195 blocks.

 Blocpdb> At most,    387 atoms in each of them.
 Blocpdb> At least,   323 atoms in each of them.

 Blocpdb> Normal end of Blocpdb.

 Diagrtb> Memory allocation for Prepmat.
 Diagrtb> Memory allocation for RTB.
 Diagrtb> Memory allocation for Diagstd.
 Diagrtb> Memory allocation for RTB_to_modes.

%Diagrtb-Er> IRWKMX up to:    239532877 Maximum allowed is LRWORK=     32000000

%Diagrtb-Er> Not enough memory allowed for working arrays. Sorry.
 Lower the number of blocks, the sizes of the largest ones...
 Or recompile DIAGRTB with larger WORKing arrays.



STDERR:
STOP *Working arrays allocation error*

real	0m0.332s
user	0m0.328s
sys	0m0.000s

• K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
• K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.