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CA strain for EXAMPLE3

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LEU 5VAL 6 -0.0003
VAL 6VAL 7 -0.0086
VAL 7ALA 8 0.0001
ALA 8THR 9 0.0611
THR 9ASP 10 -0.0002
ASP 10THR 11 -0.0213
THR 11ALA 12 -0.0004
ALA 12PHE 13 0.0921
PHE 13VAL 14 -0.0001
VAL 14PRO 15 -0.0848
PRO 15PHE 16 0.0000
PHE 16GLU 17 0.0200
GLU 17PHE 18 0.0001
PHE 18LYS 19 0.0727
LYS 19GLN 20 0.0002
GLN 20GLY 21 0.0639
GLY 21ASP 22 -0.0000
ASP 22LEU 23 -0.0664
LEU 23TYR 24 0.0003
TYR 24VAL 25 -0.0011
VAL 25GLY 26 -0.0002
GLY 26PHE 27 -0.0610
PHE 27ASP 28 -0.0001
ASP 28VAL 29 -0.0544
VAL 29ASP 30 -0.0003
ASP 30LEU 31 -0.0210
LEU 31TRP 32 -0.0001
TRP 32ALA 33 -0.0309
ALA 33ALA 34 -0.0005
ALA 34ILE 35 0.0364
ILE 35ALA 36 -0.0000
ALA 36LYS 37 -0.0407
LYS 37GLU 38 0.0002
GLU 38LEU 39 0.0308
LEU 39LYS 40 -0.0001
LYS 40LEU 41 -0.0039
LEU 41ASP 42 -0.0001
ASP 42TYR 43 -0.0142
TYR 43GLU 44 0.0000
GLU 44LEU 45 0.0487
LEU 45LYS 46 0.0003
LYS 46PRO 47 0.0144
PRO 47MET 48 0.0001
MET 48ASP 49 -0.0265
ASP 49PHE 50 -0.0000
PHE 50SER 51 -0.0019
SER 51GLY 52 0.0000
GLY 52ILE 53 -0.0075
ILE 53ILE 54 -0.0001
ILE 54PRO 55 -0.0184
PRO 55ALA 56 -0.0001
ALA 56LEU 57 0.0079
LEU 57GLN 58 -0.0005
GLN 58THR 59 -0.0208
THR 59LYS 60 -0.0001
LYS 60ASN 61 0.0178
ASN 61VAL 62 0.0000
VAL 62ASP 63 -0.0014
ASP 63LEU 64 -0.0002
LEU 64ALA 65 0.0065
ALA 65LEU 66 -0.0001
LEU 66ALA 67 -0.0011
ALA 67GLY 68 -0.0003
GLY 68ILE 69 -0.0356
ILE 69THR 70 0.0000
THR 70ILE 71 -0.0223
ILE 71THR 72 -0.0003
THR 72ASP 73 -0.0798
ASP 73GLU 74 0.0002
GLU 74ARG 75 -0.0039
ARG 75LYS 76 0.0001
LYS 76LYS 77 -0.0270
LYS 77ALA 78 -0.0002
ALA 78ILE 79 0.0231
ILE 79ASP 80 0.0001
ASP 80PHE 81 -0.0436
PHE 81SER 82 0.0000
SER 82ASP 83 -0.0436
ASP 83GLY 84 -0.0002
GLY 84TYR 85 -0.0436
TYR 85TYR 86 -0.0003
TYR 86LYS 87 -0.2657
LYS 87SER 88 -0.0001
SER 88GLY 89 -0.2766
GLY 89LEU 90 -0.0000
LEU 90LEU 91 -0.1696
LEU 91VAL 92 -0.0002
VAL 92MET 93 -0.1045
MET 93VAL 94 0.0004
VAL 94LYS 95 -0.0645
LYS 95ALA 96 0.0002
ALA 96ASN 97 -0.0113
ASN 97ASN 98 -0.0002
ASN 98ASN 99 -0.0040
ASN 99ASP 100 0.0001
ASP 100VAL 101 -0.0533
VAL 101LYS 102 -0.0002
LYS 102SER 103 -0.0001
SER 103VAL 104 0.0002
VAL 104LYS 105 -0.0333
LYS 105ASP 106 0.0001
ASP 106LEU 107 -0.0226
LEU 107ASP 108 0.0000
ASP 108GLY 109 0.0247
GLY 109LYS 110 0.0002
LYS 110VAL 111 0.0051
VAL 111VAL 112 0.0001
VAL 112ALA 113 0.0221
ALA 113VAL 114 -0.0001
VAL 114LYS 115 0.0050
LYS 115SER 116 0.0002
SER 116GLY 117 0.0189
GLY 117THR 118 0.0001
THR 118GLY 119 0.0620
GLY 119SER 120 0.0001
SER 120VAL 121 -0.0163
VAL 121ASP 122 -0.0000
ASP 122TYR 123 0.0374
TYR 123ALA 124 -0.0001
ALA 124LYS 125 -0.0608
LYS 125ALA 126 0.0001
ALA 126ASN 127 0.0219
ASN 127ILE 128 0.0001
ILE 128LYS 129 -0.1599
LYS 129THR 130 -0.0000
THR 130LYS 131 -0.0540
LYS 131ASP 132 -0.0002
ASP 132LEU 133 -0.0027
LEU 133ARG 134 -0.0001
ARG 134GLN 135 0.0250
GLN 135PHE 136 0.0002
PHE 136PRO 137 -0.0034
PRO 137ASN 138 -0.0001
ASN 138ILE 139 0.0080
ILE 139ASP 140 -0.0003
ASP 140ASN 141 0.0071
ASN 141ALA 142 0.0004
ALA 142TYR 143 0.0204
TYR 143MET 144 0.0001
MET 144GLU 145 0.0341
GLU 145LEU 146 0.0004
LEU 146GLY 147 -0.0262
GLY 147THR 148 -0.0002
THR 148ASN 149 0.0115
ASN 149ARG 150 -0.0002
ARG 150ALA 151 -0.0349
ALA 151ASP 152 0.0000
ASP 152ALA 153 -0.0586
ALA 153VAL 154 0.0003
VAL 154LEU 155 -0.0743
LEU 155HIS 156 -0.0002
HIS 156ASP 157 -0.1141
ASP 157THR 158 0.0002
THR 158PRO 159 0.0707
PRO 159ASN 160 0.0001
ASN 160ILE 161 0.0703
ILE 161LEU 162 0.0001
LEU 162TYR 163 0.0784
TYR 163PHE 164 0.0002
PHE 164ILE 165 0.1065
ILE 165LYS 166 -0.0001
LYS 166THR 167 -0.0368
THR 167ALA 168 -0.0001
ALA 168GLY 169 0.0866
GLY 169ASN 170 0.0001
ASN 170GLY 171 0.0581
GLY 171GLN 172 0.0001
GLN 172PHE 173 -0.0612
PHE 173LYS 174 0.0001
LYS 174ALA 175 -0.0818
ALA 175VAL 176 0.0003
VAL 176GLY 177 -0.1340
GLY 177ASP 178 -0.0001
ASP 178SER 179 -0.1135
SER 179LEU 180 -0.0004
LEU 180GLU 181 -0.0160
GLU 181ALA 182 -0.0006
ALA 182GLN 183 -0.4053
GLN 183GLN 184 0.0000
GLN 184TYR 185 -0.1403
TYR 185GLY 186 -0.0001
GLY 186ILE 187 -0.2443
ILE 187ALA 188 0.0001
ALA 188PHE 189 -0.0543
PHE 189PRO 190 -0.0003
PRO 190LYS 191 0.0240
LYS 191GLY 192 0.0001
GLY 192SER 193 0.0110
SER 193ASP 194 0.0002
ASP 194GLU 195 0.0073
GLU 195LEU 196 0.0003
LEU 196ARG 197 -0.0510
ARG 197ASP 198 0.0001
ASP 198LYS 199 0.0373
LYS 199VAL 200 -0.0001
VAL 200ASN 201 -0.0259
ASN 201GLY 202 -0.0001
GLY 202ALA 203 0.0005
ALA 203LEU 204 0.0005
LEU 204LYS 205 -0.0193
LYS 205THR 206 0.0000
THR 206LEU 207 0.0116
LEU 207ARG 208 -0.0001
ARG 208GLU 209 -0.0192
GLU 209ASN 210 0.0004
ASN 210GLY 211 -0.0106
GLY 211THR 212 -0.0002
THR 212TYR 213 -0.0436
TYR 213ASN 214 0.0001
ASN 214GLU 215 -0.0098
GLU 215ILE 216 -0.0000
ILE 216TYR 217 0.0041
TYR 217LYS 218 -0.0001
LYS 218LYS 219 -0.0531
LYS 219TRP 220 -0.0002
TRP 220PHE 221 0.0611
PHE 221GLY 222 0.0002
GLY 222THR 223 -0.0490
THR 223GLU 224 0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.