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CA strain for EXAMPLE3

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LEU 5VAL 6 -0.0001
VAL 6VAL 7 -0.0075
VAL 7ALA 8 -0.0002
ALA 8THR 9 -0.0272
THR 9ASP 10 0.0001
ASP 10THR 11 0.0251
THR 11ALA 12 0.0004
ALA 12PHE 13 -0.0614
PHE 13VAL 14 -0.0001
VAL 14PRO 15 -0.0153
PRO 15PHE 16 0.0001
PHE 16GLU 17 -0.0111
GLU 17PHE 18 0.0001
PHE 18LYS 19 -0.0270
LYS 19GLN 20 -0.0004
GLN 20GLY 21 -0.0067
GLY 21ASP 22 -0.0000
ASP 22LEU 23 0.0101
LEU 23TYR 24 0.0002
TYR 24VAL 25 0.0478
VAL 25GLY 26 -0.0003
GLY 26PHE 27 0.0182
PHE 27ASP 28 -0.0001
ASP 28VAL 29 0.0210
VAL 29ASP 30 0.0003
ASP 30LEU 31 -0.0105
LEU 31TRP 32 -0.0000
TRP 32ALA 33 0.0063
ALA 33ALA 34 -0.0004
ALA 34ILE 35 0.0086
ILE 35ALA 36 -0.0001
ALA 36LYS 37 0.0049
LYS 37GLU 38 -0.0003
GLU 38LEU 39 0.0189
LEU 39LYS 40 -0.0001
LYS 40LEU 41 0.0043
LEU 41ASP 42 -0.0001
ASP 42TYR 43 -0.0170
TYR 43GLU 44 -0.0001
GLU 44LEU 45 -0.0306
LEU 45LYS 46 0.0001
LYS 46PRO 47 -0.0179
PRO 47MET 48 -0.0004
MET 48ASP 49 0.0170
ASP 49PHE 50 -0.0000
PHE 50SER 51 -0.0115
SER 51GLY 52 0.0002
GLY 52ILE 53 0.0018
ILE 53ILE 54 -0.0002
ILE 54PRO 55 -0.0148
PRO 55ALA 56 -0.0001
ALA 56LEU 57 0.0034
LEU 57GLN 58 -0.0000
GLN 58THR 59 -0.0050
THR 59LYS 60 0.0002
LYS 60ASN 61 -0.0043
ASN 61VAL 62 0.0001
VAL 62ASP 63 0.0077
ASP 63LEU 64 0.0001
LEU 64ALA 65 -0.0275
ALA 65LEU 66 -0.0002
LEU 66ALA 67 -0.0356
ALA 67GLY 68 -0.0001
GLY 68ILE 69 0.0098
ILE 69THR 70 0.0000
THR 70ILE 71 0.0087
ILE 71THR 72 -0.0002
THR 72ASP 73 -0.0151
ASP 73GLU 74 -0.0003
GLU 74ARG 75 0.0174
ARG 75LYS 76 0.0002
LYS 76LYS 77 -0.0071
LYS 77ALA 78 0.0005
ALA 78ILE 79 0.0096
ILE 79ASP 80 -0.0001
ASP 80PHE 81 0.0026
PHE 81SER 82 0.0000
SER 82ASP 83 0.0100
ASP 83GLY 84 0.0002
GLY 84TYR 85 0.0125
TYR 85TYR 86 -0.0003
TYR 86LYS 87 0.1491
LYS 87SER 88 0.0001
SER 88GLY 89 -0.1201
GLY 89LEU 90 0.0003
LEU 90LEU 91 -0.0400
LEU 91VAL 92 -0.0001
VAL 92MET 93 -0.0188
MET 93VAL 94 0.0003
VAL 94LYS 95 -0.0112
LYS 95ALA 96 -0.0006
ALA 96ASN 97 -0.0018
ASN 97ASN 98 -0.0002
ASN 98ASN 99 -0.0085
ASN 99ASP 100 0.0003
ASP 100VAL 101 0.0094
VAL 101LYS 102 0.0004
LYS 102SER 103 -0.0209
SER 103VAL 104 -0.0001
VAL 104LYS 105 0.0173
LYS 105ASP 106 -0.0001
ASP 106LEU 107 0.0098
LEU 107ASP 108 -0.0001
ASP 108GLY 109 -0.0124
GLY 109LYS 110 -0.0000
LYS 110VAL 111 -0.0154
VAL 111VAL 112 0.0001
VAL 112ALA 113 -0.0096
ALA 113VAL 114 0.0000
VAL 114LYS 115 0.0061
LYS 115SER 116 0.0002
SER 116GLY 117 0.0119
GLY 117THR 118 -0.0002
THR 118GLY 119 0.0183
GLY 119SER 120 0.0000
SER 120VAL 121 -0.0284
VAL 121ASP 122 0.0003
ASP 122TYR 123 0.0260
TYR 123ALA 124 0.0001
ALA 124LYS 125 -0.0044
LYS 125ALA 126 0.0000
ALA 126ASN 127 0.0084
ASN 127ILE 128 0.0001
ILE 128LYS 129 -0.0128
LYS 129THR 130 -0.0000
THR 130LYS 131 -0.0002
LYS 131ASP 132 -0.0000
ASP 132LEU 133 -0.0180
LEU 133ARG 134 0.0003
ARG 134GLN 135 -0.0100
GLN 135PHE 136 0.0001
PHE 136PRO 137 0.0036
PRO 137ASN 138 0.0001
ASN 138ILE 139 -0.0205
ILE 139ASP 140 -0.0004
ASP 140ASN 141 -0.0143
ASN 141ALA 142 -0.0000
ALA 142TYR 143 0.0048
TYR 143MET 144 0.0003
MET 144GLU 145 -0.0227
GLU 145LEU 146 -0.0001
LEU 146GLY 147 0.0067
GLY 147THR 148 -0.0002
THR 148ASN 149 -0.0058
ASN 149ARG 150 -0.0000
ARG 150ALA 151 0.0035
ALA 151ASP 152 0.0004
ASP 152ALA 153 -0.0192
ALA 153VAL 154 -0.0001
VAL 154LEU 155 -0.0321
LEU 155HIS 156 -0.0002
HIS 156ASP 157 -0.1202
ASP 157THR 158 0.0002
THR 158PRO 159 -0.0582
PRO 159ASN 160 -0.0001
ASN 160ILE 161 -0.0889
ILE 161LEU 162 -0.0002
LEU 162TYR 163 0.0407
TYR 163PHE 164 0.0002
PHE 164ILE 165 0.0698
ILE 165LYS 166 -0.0002
LYS 166THR 167 -0.0047
THR 167ALA 168 -0.0002
ALA 168GLY 169 -0.0132
GLY 169ASN 170 -0.0000
ASN 170GLY 171 0.0463
GLY 171GLN 172 0.0001
GLN 172PHE 173 -0.0291
PHE 173LYS 174 0.0002
LYS 174ALA 175 -0.0099
ALA 175VAL 176 0.0002
VAL 176GLY 177 0.0189
GLY 177ASP 178 0.0001
ASP 178SER 179 0.0054
SER 179LEU 180 -0.0002
LEU 180GLU 181 -0.0464
GLU 181ALA 182 -0.0000
ALA 182GLN 183 0.0344
GLN 183GLN 184 0.0005
GLN 184TYR 185 0.0079
TYR 185GLY 186 0.0000
GLY 186ILE 187 -0.0234
ILE 187ALA 188 0.0001
ALA 188PHE 189 -0.0218
PHE 189PRO 190 -0.0002
PRO 190LYS 191 -0.0001
LYS 191GLY 192 -0.0003
GLY 192SER 193 0.0033
SER 193ASP 194 0.0001
ASP 194GLU 195 0.0004
GLU 195LEU 196 0.0000
LEU 196ARG 197 -0.0022
ARG 197ASP 198 -0.0001
ASP 198LYS 199 -0.0037
LYS 199VAL 200 -0.0004
VAL 200ASN 201 -0.0041
ASN 201GLY 202 -0.0002
GLY 202ALA 203 -0.0070
ALA 203LEU 204 0.0003
LEU 204LYS 205 -0.0110
LYS 205THR 206 0.0002
THR 206LEU 207 -0.0012
LEU 207ARG 208 0.0002
ARG 208GLU 209 0.0113
GLU 209ASN 210 0.0002
ASN 210GLY 211 0.0323
GLY 211THR 212 -0.0003
THR 212TYR 213 -0.0010
TYR 213ASN 214 -0.0002
ASN 214GLU 215 -0.0329
GLU 215ILE 216 0.0001
ILE 216TYR 217 0.0485
TYR 217LYS 218 -0.0000
LYS 218LYS 219 -0.0020
LYS 219TRP 220 0.0004
TRP 220PHE 221 0.0531
PHE 221GLY 222 -0.0000
GLY 222THR 223 -0.0175
THR 223GLU 224 -0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.