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CA strain for EXAMPLE3

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LEU 5VAL 6 -0.0000
VAL 6VAL 7 -0.0523
VAL 7ALA 8 0.0002
ALA 8THR 9 -0.1256
THR 9ASP 10 -0.0001
ASP 10THR 11 0.1237
THR 11ALA 12 0.0004
ALA 12PHE 13 -0.2362
PHE 13VAL 14 -0.0000
VAL 14PRO 15 0.0666
PRO 15PHE 16 -0.0000
PHE 16GLU 17 -0.1781
GLU 17PHE 18 0.0002
PHE 18LYS 19 -0.1715
LYS 19GLN 20 0.0002
GLN 20GLY 21 -0.1942
GLY 21ASP 22 -0.0001
ASP 22LEU 23 0.1929
LEU 23TYR 24 -0.0002
TYR 24VAL 25 0.0372
VAL 25GLY 26 0.0001
GLY 26PHE 27 0.0379
PHE 27ASP 28 -0.0002
ASP 28VAL 29 0.0202
VAL 29ASP 30 0.0003
ASP 30LEU 31 0.0772
LEU 31TRP 32 0.0002
TRP 32ALA 33 0.0014
ALA 33ALA 34 -0.0001
ALA 34ILE 35 -0.0343
ILE 35ALA 36 -0.0002
ALA 36LYS 37 0.0726
LYS 37GLU 38 0.0000
GLU 38LEU 39 0.0104
LEU 39LYS 40 -0.0003
LYS 40LEU 41 0.1121
LEU 41ASP 42 0.0002
ASP 42TYR 43 0.0704
TYR 43GLU 44 0.0001
GLU 44LEU 45 -0.0905
LEU 45LYS 46 0.0002
LYS 46PRO 47 -0.0001
PRO 47MET 48 -0.0002
MET 48ASP 49 0.1652
ASP 49PHE 50 0.0003
PHE 50SER 51 -0.0894
SER 51GLY 52 -0.0000
GLY 52ILE 53 -0.0052
ILE 53ILE 54 -0.0001
ILE 54PRO 55 -0.0870
PRO 55ALA 56 0.0000
ALA 56LEU 57 -0.0120
LEU 57GLN 58 -0.0002
GLN 58THR 59 -0.0038
THR 59LYS 60 0.0001
LYS 60ASN 61 -0.0426
ASN 61VAL 62 -0.0001
VAL 62ASP 63 0.0558
ASP 63LEU 64 -0.0001
LEU 64ALA 65 -0.1337
ALA 65LEU 66 0.0001
LEU 66ALA 67 -0.0542
ALA 67GLY 68 -0.0003
GLY 68ILE 69 0.1614
ILE 69THR 70 0.0000
THR 70ILE 71 0.1134
ILE 71THR 72 -0.0001
THR 72ASP 73 0.0488
ASP 73GLU 74 -0.0000
GLU 74ARG 75 0.1416
ARG 75LYS 76 0.0002
LYS 76LYS 77 -0.0409
LYS 77ALA 78 -0.0001
ALA 78ILE 79 0.0304
ILE 79ASP 80 0.0001
ASP 80PHE 81 0.0163
PHE 81SER 82 0.0002
SER 82ASP 83 0.0383
ASP 83GLY 84 -0.0004
GLY 84TYR 85 0.0878
TYR 85TYR 86 -0.0004
TYR 86LYS 87 -0.2125
LYS 87SER 88 0.0001
SER 88GLY 89 -0.2290
GLY 89LEU 90 -0.0001
LEU 90LEU 91 0.0120
LEU 91VAL 92 0.0002
VAL 92MET 93 0.0415
MET 93VAL 94 0.0003
VAL 94LYS 95 0.0172
LYS 95ALA 96 -0.0001
ALA 96ASN 97 -0.0273
ASN 97ASN 98 -0.0001
ASN 98ASN 99 0.0668
ASN 99ASP 100 -0.0001
ASP 100VAL 101 -0.0980
VAL 101LYS 102 -0.0000
LYS 102SER 103 0.1713
SER 103VAL 104 -0.0001
VAL 104LYS 105 -0.0918
LYS 105ASP 106 -0.0004
ASP 106LEU 107 -0.1398
LEU 107ASP 108 0.0000
ASP 108GLY 109 0.0981
GLY 109LYS 110 0.0001
LYS 110VAL 111 0.0813
VAL 111VAL 112 -0.0000
VAL 112ALA 113 0.0611
ALA 113VAL 114 -0.0000
VAL 114LYS 115 -0.0016
LYS 115SER 116 -0.0003
SER 116GLY 117 0.0075
GLY 117THR 118 0.0001
THR 118GLY 119 0.0837
GLY 119SER 120 -0.0003
SER 120VAL 121 0.0203
VAL 121ASP 122 0.0002
ASP 122TYR 123 0.0378
TYR 123ALA 124 -0.0002
ALA 124LYS 125 -0.1106
LYS 125ALA 126 -0.0001
ALA 126ASN 127 0.0320
ASN 127ILE 128 -0.0001
ILE 128LYS 129 -0.3066
LYS 129THR 130 0.0000
THR 130LYS 131 -0.1050
LYS 131ASP 132 -0.0001
ASP 132LEU 133 0.0696
LEU 133ARG 134 -0.0000
ARG 134GLN 135 0.1268
GLN 135PHE 136 -0.0003
PHE 136PRO 137 0.0170
PRO 137ASN 138 0.0003
ASN 138ILE 139 0.0963
ILE 139ASP 140 0.0002
ASP 140ASN 141 0.0640
ASN 141ALA 142 -0.0002
ALA 142TYR 143 -0.0211
TYR 143MET 144 -0.0000
MET 144GLU 145 0.1058
GLU 145LEU 146 -0.0000
LEU 146GLY 147 -0.0024
GLY 147THR 148 -0.0000
THR 148ASN 149 0.0231
ASN 149ARG 150 0.0000
ARG 150ALA 151 -0.0381
ALA 151ASP 152 -0.0003
ASP 152ALA 153 -0.1161
ALA 153VAL 154 -0.0000
VAL 154LEU 155 0.0098
LEU 155HIS 156 0.0003
HIS 156ASP 157 -0.0816
ASP 157THR 158 -0.0001
THR 158PRO 159 -0.2341
PRO 159ASN 160 0.0005
ASN 160ILE 161 -0.3592
ILE 161LEU 162 -0.0003
LEU 162TYR 163 -0.2699
TYR 163PHE 164 -0.0001
PHE 164ILE 165 -0.2994
ILE 165LYS 166 -0.0000
LYS 166THR 167 0.1633
THR 167ALA 168 0.0000
ALA 168GLY 169 -0.0279
GLY 169ASN 170 0.0001
ASN 170GLY 171 -0.1074
GLY 171GLN 172 0.0001
GLN 172PHE 173 0.0962
PHE 173LYS 174 0.0004
LYS 174ALA 175 0.0266
ALA 175VAL 176 0.0004
VAL 176GLY 177 -0.1872
GLY 177ASP 178 -0.0001
ASP 178SER 179 -0.1413
SER 179LEU 180 -0.0003
LEU 180GLU 181 0.1013
GLU 181ALA 182 0.0001
ALA 182GLN 183 -0.2550
GLN 183GLN 184 0.0002
GLN 184TYR 185 -0.0388
TYR 185GLY 186 -0.0002
GLY 186ILE 187 -0.1395
ILE 187ALA 188 0.0001
ALA 188PHE 189 -0.0962
PHE 189PRO 190 -0.0001
PRO 190LYS 191 -0.0253
LYS 191GLY 192 0.0003
GLY 192SER 193 -0.0184
SER 193ASP 194 0.0003
ASP 194GLU 195 -0.0043
GLU 195LEU 196 -0.0001
LEU 196ARG 197 -0.0019
ARG 197ASP 198 -0.0001
ASP 198LYS 199 -0.0721
LYS 199VAL 200 0.0001
VAL 200ASN 201 0.0151
ASN 201GLY 202 0.0003
GLY 202ALA 203 -0.0448
ALA 203LEU 204 -0.0003
LEU 204LYS 205 0.0027
LYS 205THR 206 -0.0001
THR 206LEU 207 0.0153
LEU 207ARG 208 -0.0002
ARG 208GLU 209 -0.0578
GLU 209ASN 210 0.0002
ASN 210GLY 211 0.0852
GLY 211THR 212 -0.0002
THR 212TYR 213 -0.1004
TYR 213ASN 214 -0.0001
ASN 214GLU 215 -0.0113
GLU 215ILE 216 0.0007
ILE 216TYR 217 -0.0920
TYR 217LYS 218 0.0001
LYS 218LYS 219 0.0149
LYS 219TRP 220 -0.0003
TRP 220PHE 221 -0.1421
PHE 221GLY 222 0.0001
GLY 222THR 223 0.0608
THR 223GLU 224 0.0001

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.