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CA strain for EXAMPLE2

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1ILE 2 -0.0001
ILE 2GLU 3 -0.0073
GLU 3GLU 4 -0.0001
GLU 4GLY 5 0.0112
GLY 5LYS 6 0.0001
LYS 6LEU 7 -0.0140
LEU 7VAL 8 0.0001
VAL 8ILE 9 -0.0227
ILE 9TRP 10 -0.0001
TRP 10ILE 11 -0.0854
ILE 11ASN 12 0.0001
ASN 12GLY 13 -0.0192
GLY 13ASP 14 0.0003
ASP 14LYS 15 -0.0466
LYS 15GLY 16 -0.0002
GLY 16TYR 17 -0.0688
TYR 17ASN 18 0.0003
ASN 18GLY 19 0.0629
GLY 19LEU 20 0.0003
LEU 20ALA 21 -0.0014
ALA 21GLU 22 -0.0000
GLU 22VAL 23 0.0155
VAL 23GLY 24 -0.0002
GLY 24LYS 25 0.0492
LYS 25LYS 26 0.0002
LYS 26PHE 27 0.0215
PHE 27GLU 28 0.0003
GLU 28LYS 29 0.0724
LYS 29ASP 30 0.0002
ASP 30THR 31 0.0349
THR 31GLY 32 -0.0002
GLY 32ILE 33 0.0397
ILE 33LYS 34 -0.0001
LYS 34VAL 35 -0.0288
VAL 35THR 36 0.0000
THR 36VAL 37 -0.0844
VAL 37GLU 38 -0.0001
GLU 38HIS 39 -0.0178
HIS 39PRO 40 -0.0001
PRO 40ASP 41 0.0140
ASP 41LYS 42 -0.0000
LYS 42LEU 43 -0.0124
LEU 43GLU 44 -0.0001
GLU 44GLU 45 0.0135
GLU 45LYS 46 -0.0001
LYS 46PHE 47 -0.0214
PHE 47PRO 48 0.0001
PRO 48GLN 49 -0.0196
GLN 49VAL 50 0.0000
VAL 50ALA 51 -0.0165
ALA 51ALA 52 0.0004
ALA 52THR 53 -0.0035
THR 53GLY 54 -0.0000
GLY 54ASP 55 -0.0185
ASP 55GLY 56 0.0002
GLY 56PRO 57 -0.0076
PRO 57ASP 58 0.0002
ASP 58ILE 59 -0.0021
ILE 59ILE 60 0.0002
ILE 60PHE 61 0.0057
PHE 61TRP 62 0.0000
TRP 62ALA 63 0.0750
ALA 63HIS 64 0.0001
HIS 64ASP 65 0.0768
ASP 65ARG 66 0.0003
ARG 66PHE 67 0.1241
PHE 67GLY 68 0.0000
GLY 68GLY 69 0.0270
GLY 69TYR 70 -0.0003
TYR 70ALA 71 -0.0951
ALA 71GLN 72 0.0003
GLN 72SER 73 -0.0419
SER 73GLY 74 0.0003
GLY 74LEU 75 -0.0003
LEU 75LEU 76 -0.0002
LEU 76ALA 77 -0.0004
ALA 77GLU 78 -0.0003
GLU 78ILE 79 -0.0429
ILE 79THR 80 0.0001
THR 80PRO 81 -0.0394
PRO 81ASP 82 0.0001
ASP 82LYS 83 -0.0126
LYS 83ALA 84 0.0004
ALA 84PHE 85 -0.0251
PHE 85GLN 86 0.0000
GLN 86ASP 87 -0.0178
ASP 87LYS 88 -0.0003
LYS 88LEU 89 0.0187
LEU 89TYR 90 0.0005
TYR 90PRO 91 -0.0025
PRO 91PHE 92 0.0001
PHE 92THR 93 -0.0081
THR 93TRP 94 -0.0001
TRP 94ASP 95 0.0657
ASP 95ALA 96 -0.0003
ALA 96VAL 97 0.0419
VAL 97ARG 98 -0.0002
ARG 98TYR 99 -0.0517
TYR 99ASN 100 0.0002
ASN 100GLY 101 -0.0152
GLY 101LYS 102 0.0001
LYS 102LEU 103 -0.0162
LEU 103ILE 104 0.0002
ILE 104ALA 105 0.0166
ALA 105TYR 106 -0.0000
TYR 106PRO 107 -0.0347
PRO 107ILE 108 -0.0002
ILE 108ALA 109 -0.0720
ALA 109VAL 110 -0.0001
VAL 110GLU 111 -0.0017
GLU 111ALA 112 0.0002
ALA 112LEU 113 0.0376
LEU 113SER 114 0.0001
SER 114LEU 115 0.0297
LEU 115ILE 116 -0.0001
ILE 116TYR 117 -0.0123
TYR 117ASN 118 0.0002
ASN 118LYS 119 0.0358
LYS 119ASP 120 -0.0000
ASP 120LEU 121 -0.0553
LEU 121LEU 122 -0.0003
LEU 122PRO 123 -0.0120
PRO 123ASN 124 -0.0001
ASN 124PRO 125 0.0143
PRO 125PRO 126 -0.0001
PRO 126LYS 127 0.0464
LYS 127THR 128 0.0002
THR 128TRP 129 -0.0128
TRP 129GLU 130 0.0000
GLU 130GLU 131 0.0821
GLU 131ILE 132 -0.0001
ILE 132PRO 133 -0.0460
PRO 133ALA 134 0.0001
ALA 134LEU 135 -0.0783
LEU 135ASP 136 0.0001
ASP 136LYS 137 -0.0307
LYS 137GLU 138 -0.0000
GLU 138LEU 139 -0.0539
LEU 139LYS 140 -0.0001
LYS 140ALA 141 -0.0117
ALA 141LYS 142 -0.0004
LYS 142GLY 143 -0.0139
GLY 143LYS 144 0.0002
LYS 144SER 145 0.0251
SER 145ALA 146 0.0004
ALA 146LEU 147 0.0056
LEU 147MET 148 0.0001
MET 148PHE 149 -0.0082
PHE 149ASN 150 0.0002
ASN 150LEU 151 -0.0492
LEU 151GLN 152 -0.0002
GLN 152GLU 153 0.0398
GLU 153PRO 154 -0.0000
PRO 154TYR 155 -0.0145
TYR 155PHE 156 -0.0001
PHE 156THR 157 -0.0425
THR 157TRP 158 -0.0000
TRP 158PRO 159 0.0136
PRO 159LEU 160 0.0001
LEU 160ILE 161 0.0253
ILE 161ALA 162 -0.0002
ALA 162ALA 163 0.0822
ALA 163ASP 164 0.0002
ASP 164GLY 165 0.2260
GLY 165GLY 166 -0.0002
GLY 166TYR 167 0.1669
TYR 167ALA 168 -0.0000
ALA 168PHE 169 0.0731
PHE 169LYS 170 0.0000
LYS 170TYR 171 0.0279
TYR 171GLU 172 0.0001
GLU 172ASN 173 -0.0190
ASN 173GLY 174 -0.0001
GLY 174LYS 175 -0.0118
LYS 175TYR 176 0.0002
TYR 176ASP 177 0.0292
ASP 177ILE 178 -0.0001
ILE 178LYS 179 0.0758
LYS 179ASP 180 0.0003
ASP 180VAL 181 -0.0104
VAL 181GLY 182 0.0001
GLY 182VAL 183 -0.0238
VAL 183ASP 184 -0.0000
ASP 184ASN 185 -0.0163
ASN 185ALA 186 -0.0000
ALA 186GLY 187 -0.0363
GLY 187ALA 188 -0.0004
ALA 188LYS 189 0.0050
LYS 189ALA 190 -0.0001
ALA 190GLY 191 -0.0227
GLY 191LEU 192 -0.0001
LEU 192THR 193 0.0170
THR 193PHE 194 -0.0002
PHE 194LEU 195 -0.0205
LEU 195VAL 196 -0.0001
VAL 196ASP 197 0.0052
ASP 197LEU 198 -0.0001
LEU 198ILE 199 -0.0186
ILE 199LYS 200 0.0001
LYS 200ASN 201 -0.0092
ASN 201LYS 202 0.0001
LYS 202HIS 203 -0.0232
HIS 203MET 204 0.0002
MET 204ASN 205 -0.0205
ASN 205ALA 206 -0.0001
ALA 206ASP 207 -0.0106
ASP 207THR 208 -0.0000
THR 208ASP 209 0.0101
ASP 209TYR 210 0.0000
TYR 210SER 211 -0.0279
SER 211ILE 212 0.0001
ILE 212ALA 213 0.0168
ALA 213GLU 214 0.0001
GLU 214ALA 215 -0.0261
ALA 215ALA 216 0.0001
ALA 216PHE 217 0.0110
PHE 217ASN 218 -0.0004
ASN 218LYS 219 -0.0683
LYS 219GLY 220 -0.0002
GLY 220GLU 221 -0.0080
GLU 221THR 222 -0.0005
THR 222ALA 223 0.0339
ALA 223MET 224 -0.0001
MET 224THR 225 -0.0182
THR 225ILE 226 -0.0001
ILE 226ASN 227 -0.1404
ASN 227GLY 228 -0.0002
GLY 228PRO 229 -0.0928
PRO 229TRP 230 -0.0006
TRP 230ALA 231 -0.0898
ALA 231TRP 232 -0.0001
TRP 232SER 233 -0.0571
SER 233ASN 234 0.0000
ASN 234ILE 235 -0.1339
ILE 235ASP 236 -0.0001
ASP 236THR 237 0.0543
THR 237SER 238 0.0001
SER 238LYS 239 -0.0237
LYS 239VAL 240 0.0001
VAL 240ASN 241 0.0350
ASN 241TYR 242 -0.0003
TYR 242GLY 243 0.0936
GLY 243VAL 244 -0.0000
VAL 244THR 245 -0.0025
THR 245VAL 246 -0.0004
VAL 246LEU 247 -0.0865
LEU 247PRO 248 0.0002
PRO 248THR 249 -0.0680
THR 249PHE 250 -0.0002
PHE 250LYS 251 -0.0236
LYS 251GLY 252 -0.0001
GLY 252GLN 253 0.0181
GLN 253PRO 254 -0.0003
PRO 254SER 255 -0.0022
SER 255LYS 256 -0.0000
LYS 256PRO 257 0.0134
PRO 257PHE 258 0.0001
PHE 258VAL 259 0.0179
VAL 259GLY 260 -0.0003
GLY 260VAL 261 0.0474
VAL 261LEU 262 0.0001
LEU 262SER 263 -0.0511
SER 263ALA 264 -0.0000
ALA 264GLY 265 -0.0284
GLY 265ILE 266 0.0004
ILE 266ASN 267 -0.0622
ASN 267ALA 268 -0.0000
ALA 268ALA 269 0.0258
ALA 269SER 270 -0.0003
SER 270PRO 271 0.0230
PRO 271ASN 272 -0.0001
ASN 272LYS 273 0.0213
LYS 273GLU 274 -0.0003
GLU 274LEU 275 0.0436
LEU 275ALA 276 0.0002
ALA 276LYS 277 -0.0289
LYS 277GLU 278 0.0002
GLU 278PHE 279 -0.0242
PHE 279LEU 280 -0.0003
LEU 280GLU 281 -0.0023
GLU 281ASN 282 0.0004
ASN 282TYR 283 0.0391
TYR 283LEU 284 0.0000
LEU 284LEU 285 0.0307
LEU 285THR 286 -0.0001
THR 286ASP 287 -0.0799
ASP 287GLU 288 0.0001
GLU 288GLY 289 0.0214
GLY 289LEU 290 -0.0000
LEU 290GLU 291 -0.0232
GLU 291ALA 292 0.0001
ALA 292VAL 293 0.0441
VAL 293ASN 294 -0.0001
ASN 294LYS 295 -0.0029
LYS 295ASP 296 0.0002
ASP 296LYS 297 -0.0960
LYS 297PRO 298 0.0001
PRO 298LEU 299 -0.1807
LEU 299GLY 300 -0.0002
GLY 300ALA 301 -0.0722
ALA 301VAL 302 -0.0001
VAL 302ALA 303 -0.0574
ALA 303LEU 304 -0.0000
LEU 304LYS 305 0.0141
LYS 305SER 306 0.0004
SER 306TYR 307 0.0154
TYR 307GLU 308 -0.0000
GLU 308GLU 309 0.0189
GLU 309GLU 310 0.0002
GLU 310LEU 311 -0.0186
LEU 311ALA 312 0.0000
ALA 312LYS 313 0.0062
LYS 313ASP 314 -0.0001
ASP 314PRO 315 -0.1565
PRO 315ARG 316 -0.0002
ARG 316ILE 317 -0.0898
ILE 317ALA 318 0.0006
ALA 318ALA 319 -0.1179
ALA 319THR 320 -0.0001
THR 320MET 321 0.0155
MET 321GLU 322 -0.0000
GLU 322ASN 323 -0.0193
ASN 323ALA 324 0.0002
ALA 324GLN 325 -0.0306
GLN 325LYS 326 -0.0001
LYS 326GLY 327 0.1172
GLY 327GLU 328 0.0001
GLU 328ILE 329 0.1130
ILE 329MET 330 0.0003
MET 330PRO 331 0.0190
PRO 331ASN 332 -0.0000
ASN 332ILE 333 0.0494
ILE 333PRO 334 -0.0002
PRO 334GLN 335 0.3782
GLN 335MET 336 -0.0000
MET 336SER 337 -0.0290
SER 337ALA 338 0.0001
ALA 338PHE 339 -0.0117
PHE 339TRP 340 0.0001
TRP 340TYR 341 0.0048
TYR 341ALA 342 0.0001
ALA 342VAL 343 -0.0513
VAL 343ARG 344 -0.0000
ARG 344THR 345 0.0169
THR 345ALA 346 -0.0001
ALA 346VAL 347 -0.0735
VAL 347ILE 348 -0.0001
ILE 348ASN 349 -0.0152
ASN 349ALA 350 -0.0001
ALA 350ALA 351 -0.0418
ALA 351SER 352 0.0000
SER 352GLY 353 -0.0120
GLY 353ARG 354 0.0000
ARG 354GLN 355 -0.0275
GLN 355THR 356 -0.0002
THR 356VAL 357 -0.0346
VAL 357ASP 358 -0.0002
ASP 358GLU 359 -0.0226
GLU 359ALA 360 -0.0003
ALA 360LEU 361 -0.0194
LEU 361LYS 362 -0.0002
LYS 362ASP 363 0.0282
ASP 363ALA 364 -0.0001
ALA 364GLN 365 -0.0603
GLN 365THR 366 -0.0000
THR 366ARG 367 0.0673
ARG 367ILE 368 0.0003
ILE 368THR 369 -0.0537
THR 369LYS 370 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.