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CA strain for EXAMPLE2

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1ILE 2 0.0001
ILE 2GLU 3 -0.0096
GLU 3GLU 4 0.0003
GLU 4GLY 5 -0.0069
GLY 5LYS 6 -0.0000
LYS 6LEU 7 -0.0007
LEU 7VAL 8 0.0000
VAL 8ILE 9 -0.0214
ILE 9TRP 10 -0.0004
TRP 10ILE 11 -0.0735
ILE 11ASN 12 -0.0002
ASN 12GLY 13 0.0328
GLY 13ASP 14 0.0001
ASP 14LYS 15 0.0057
LYS 15GLY 16 -0.0003
GLY 16TYR 17 0.0035
TYR 17ASN 18 -0.0003
ASN 18GLY 19 -0.0205
GLY 19LEU 20 -0.0001
LEU 20ALA 21 0.0091
ALA 21GLU 22 -0.0004
GLU 22VAL 23 -0.0185
VAL 23GLY 24 -0.0001
GLY 24LYS 25 -0.0118
LYS 25LYS 26 -0.0003
LYS 26PHE 27 -0.0126
PHE 27GLU 28 0.0001
GLU 28LYS 29 -0.0494
LYS 29ASP 30 0.0001
ASP 30THR 31 -0.0237
THR 31GLY 32 -0.0001
GLY 32ILE 33 -0.0422
ILE 33LYS 34 -0.0001
LYS 34VAL 35 -0.0060
VAL 35THR 36 -0.0001
THR 36VAL 37 -0.0233
VAL 37GLU 38 -0.0002
GLU 38HIS 39 -0.0383
HIS 39PRO 40 -0.0001
PRO 40ASP 41 0.0123
ASP 41LYS 42 -0.0003
LYS 42LEU 43 0.0591
LEU 43GLU 44 -0.0002
GLU 44GLU 45 -0.0209
GLU 45LYS 46 0.0003
LYS 46PHE 47 0.0409
PHE 47PRO 48 -0.0002
PRO 48GLN 49 -0.0152
GLN 49VAL 50 0.0002
VAL 50ALA 51 0.0315
ALA 51ALA 52 -0.0001
ALA 52THR 53 -0.0175
THR 53GLY 54 0.0000
GLY 54ASP 55 0.0146
ASP 55GLY 56 -0.0002
GLY 56PRO 57 0.0066
PRO 57ASP 58 0.0001
ASP 58ILE 59 -0.0132
ILE 59ILE 60 0.0001
ILE 60PHE 61 -0.0443
PHE 61TRP 62 -0.0001
TRP 62ALA 63 -0.0037
ALA 63HIS 64 0.0002
HIS 64ASP 65 -0.0002
ASP 65ARG 66 0.0003
ARG 66PHE 67 -0.0346
PHE 67GLY 68 -0.0001
GLY 68GLY 69 -0.0147
GLY 69TYR 70 0.0000
TYR 70ALA 71 0.1160
ALA 71GLN 72 0.0000
GLN 72SER 73 0.0029
SER 73GLY 74 0.0001
GLY 74LEU 75 -0.0005
LEU 75LEU 76 0.0003
LEU 76ALA 77 0.0124
ALA 77GLU 78 0.0001
GLU 78ILE 79 0.0271
ILE 79THR 80 -0.0004
THR 80PRO 81 0.0401
PRO 81ASP 82 0.0001
ASP 82LYS 83 0.0279
LYS 83ALA 84 0.0001
ALA 84PHE 85 -0.0269
PHE 85GLN 86 0.0003
GLN 86ASP 87 0.0244
ASP 87LYS 88 -0.0003
LYS 88LEU 89 0.0095
LEU 89TYR 90 0.0003
TYR 90PRO 91 0.0101
PRO 91PHE 92 0.0001
PHE 92THR 93 -0.0112
THR 93TRP 94 -0.0001
TRP 94ASP 95 -0.0139
ASP 95ALA 96 0.0002
ALA 96VAL 97 -0.0439
VAL 97ARG 98 0.0003
ARG 98TYR 99 0.1134
TYR 99ASN 100 0.0003
ASN 100GLY 101 0.0514
GLY 101LYS 102 0.0000
LYS 102LEU 103 0.0161
LEU 103ILE 104 -0.0004
ILE 104ALA 105 -0.0123
ALA 105TYR 106 -0.0000
TYR 106PRO 107 0.0053
PRO 107ILE 108 0.0000
ILE 108ALA 109 0.0238
ALA 109VAL 110 -0.0005
VAL 110GLU 111 -0.0333
GLU 111ALA 112 -0.0001
ALA 112LEU 113 -0.0308
LEU 113SER 114 -0.0001
SER 114LEU 115 0.0250
LEU 115ILE 116 0.0000
ILE 116TYR 117 -0.0012
TYR 117ASN 118 0.0000
ASN 118LYS 119 -0.0322
LYS 119ASP 120 -0.0003
ASP 120LEU 121 -0.0079
LEU 121LEU 122 -0.0000
LEU 122PRO 123 -0.0415
PRO 123ASN 124 0.0004
ASN 124PRO 125 0.0084
PRO 125PRO 126 -0.0000
PRO 126LYS 127 0.0359
LYS 127THR 128 -0.0000
THR 128TRP 129 -0.0432
TRP 129GLU 130 -0.0001
GLU 130GLU 131 0.0645
GLU 131ILE 132 0.0002
ILE 132PRO 133 -0.0153
PRO 133ALA 134 0.0002
ALA 134LEU 135 -0.0552
LEU 135ASP 136 0.0001
ASP 136LYS 137 0.0016
LYS 137GLU 138 0.0001
GLU 138LEU 139 -0.0243
LEU 139LYS 140 0.0005
LYS 140ALA 141 -0.0665
ALA 141LYS 142 -0.0000
LYS 142GLY 143 -0.0065
GLY 143LYS 144 0.0001
LYS 144SER 145 -0.0482
SER 145ALA 146 -0.0003
ALA 146LEU 147 -0.0498
LEU 147MET 148 -0.0001
MET 148PHE 149 -0.1256
PHE 149ASN 150 0.0002
ASN 150LEU 151 -0.0118
LEU 151GLN 152 0.0002
GLN 152GLU 153 -0.0472
GLU 153PRO 154 0.0000
PRO 154TYR 155 0.0885
TYR 155PHE 156 0.0001
PHE 156THR 157 0.0468
THR 157TRP 158 -0.0003
TRP 158PRO 159 0.0200
PRO 159LEU 160 0.0002
LEU 160ILE 161 0.0692
ILE 161ALA 162 -0.0003
ALA 162ALA 163 0.0546
ALA 163ASP 164 -0.0002
ASP 164GLY 165 0.2859
GLY 165GLY 166 0.0002
GLY 166TYR 167 0.1015
TYR 167ALA 168 0.0004
ALA 168PHE 169 0.2020
PHE 169LYS 170 -0.0000
LYS 170TYR 171 0.1725
TYR 171GLU 172 -0.0001
GLU 172ASN 173 0.0473
ASN 173GLY 174 0.0001
GLY 174LYS 175 -0.0528
LYS 175TYR 176 0.0001
TYR 176ASP 177 0.1624
ASP 177ILE 178 0.0003
ILE 178LYS 179 -0.0222
LYS 179ASP 180 0.0002
ASP 180VAL 181 0.0180
VAL 181GLY 182 -0.0002
GLY 182VAL 183 0.0467
VAL 183ASP 184 0.0001
ASP 184ASN 185 0.0425
ASN 185ALA 186 0.0003
ALA 186GLY 187 -0.0032
GLY 187ALA 188 0.0001
ALA 188LYS 189 0.0243
LYS 189ALA 190 0.0001
ALA 190GLY 191 -0.0108
GLY 191LEU 192 -0.0003
LEU 192THR 193 -0.0090
THR 193PHE 194 -0.0003
PHE 194LEU 195 -0.0173
LEU 195VAL 196 -0.0000
VAL 196ASP 197 -0.0568
ASP 197LEU 198 0.0001
LEU 198ILE 199 -0.0151
ILE 199LYS 200 -0.0001
LYS 200ASN 201 -0.1115
ASN 201LYS 202 0.0001
LYS 202HIS 203 0.0310
HIS 203MET 204 -0.0003
MET 204ASN 205 -0.0850
ASN 205ALA 206 -0.0004
ALA 206ASP 207 -0.0088
ASP 207THR 208 -0.0001
THR 208ASP 209 0.0822
ASP 209TYR 210 -0.0001
TYR 210SER 211 -0.0358
SER 211ILE 212 0.0002
ILE 212ALA 213 0.0257
ALA 213GLU 214 0.0003
GLU 214ALA 215 -0.0057
ALA 215ALA 216 -0.0001
ALA 216PHE 217 -0.0026
PHE 217ASN 218 0.0001
ASN 218LYS 219 0.0277
LYS 219GLY 220 0.0003
GLY 220GLU 221 0.0016
GLU 221THR 222 0.0002
THR 222ALA 223 0.0093
ALA 223MET 224 -0.0001
MET 224THR 225 -0.0513
THR 225ILE 226 -0.0003
ILE 226ASN 227 -0.0047
ASN 227GLY 228 -0.0004
GLY 228PRO 229 0.0475
PRO 229TRP 230 -0.0000
TRP 230ALA 231 -0.0062
ALA 231TRP 232 0.0002
TRP 232SER 233 0.0309
SER 233ASN 234 0.0004
ASN 234ILE 235 -0.0174
ILE 235ASP 236 0.0003
ASP 236THR 237 0.0199
THR 237SER 238 -0.0003
SER 238LYS 239 -0.0140
LYS 239VAL 240 -0.0001
VAL 240ASN 241 -0.0158
ASN 241TYR 242 -0.0000
TYR 242GLY 243 0.0814
GLY 243VAL 244 0.0002
VAL 244THR 245 0.0245
THR 245VAL 246 0.0001
VAL 246LEU 247 0.0247
LEU 247PRO 248 0.0001
PRO 248THR 249 0.0284
THR 249PHE 250 0.0001
PHE 250LYS 251 -0.0129
LYS 251GLY 252 0.0003
GLY 252GLN 253 -0.0085
GLN 253PRO 254 -0.0001
PRO 254SER 255 -0.0382
SER 255LYS 256 -0.0003
LYS 256PRO 257 -0.0676
PRO 257PHE 258 0.0003
PHE 258VAL 259 -0.0013
VAL 259GLY 260 -0.0001
GLY 260VAL 261 -0.0989
VAL 261LEU 262 -0.0001
LEU 262SER 263 -0.0446
SER 263ALA 264 0.0001
ALA 264GLY 265 -0.0070
GLY 265ILE 266 -0.0005
ILE 266ASN 267 0.0615
ASN 267ALA 268 0.0002
ALA 268ALA 269 -0.0255
ALA 269SER 270 0.0000
SER 270PRO 271 -0.0303
PRO 271ASN 272 -0.0003
ASN 272LYS 273 -0.0025
LYS 273GLU 274 -0.0001
GLU 274LEU 275 -0.0398
LEU 275ALA 276 0.0000
ALA 276LYS 277 0.0320
LYS 277GLU 278 -0.0002
GLU 278PHE 279 -0.0127
PHE 279LEU 280 -0.0002
LEU 280GLU 281 0.0020
GLU 281ASN 282 -0.0000
ASN 282TYR 283 -0.0376
TYR 283LEU 284 -0.0002
LEU 284LEU 285 0.0096
LEU 285THR 286 -0.0001
THR 286ASP 287 0.0834
ASP 287GLU 288 0.0001
GLU 288GLY 289 -0.0034
GLY 289LEU 290 -0.0000
LEU 290GLU 291 0.0128
GLU 291ALA 292 0.0002
ALA 292VAL 293 -0.0176
VAL 293ASN 294 -0.0002
ASN 294LYS 295 -0.0024
LYS 295ASP 296 -0.0001
ASP 296LYS 297 0.0620
LYS 297PRO 298 -0.0001
PRO 298LEU 299 0.0569
LEU 299GLY 300 0.0001
GLY 300ALA 301 -0.0016
ALA 301VAL 302 0.0001
VAL 302ALA 303 0.0016
ALA 303LEU 304 -0.0004
LEU 304LYS 305 0.0066
LYS 305SER 306 -0.0001
SER 306TYR 307 -0.0370
TYR 307GLU 308 -0.0001
GLU 308GLU 309 -0.0100
GLU 309GLU 310 -0.0002
GLU 310LEU 311 0.0179
LEU 311ALA 312 -0.0004
ALA 312LYS 313 -0.0123
LYS 313ASP 314 0.0002
ASP 314PRO 315 0.0961
PRO 315ARG 316 0.0002
ARG 316ILE 317 0.0723
ILE 317ALA 318 -0.0004
ALA 318ALA 319 0.0599
ALA 319THR 320 -0.0000
THR 320MET 321 -0.0191
MET 321GLU 322 0.0000
GLU 322ASN 323 0.0135
ASN 323ALA 324 0.0001
ALA 324GLN 325 -0.0594
GLN 325LYS 326 0.0000
LYS 326GLY 327 0.1055
GLY 327GLU 328 -0.0004
GLU 328ILE 329 -0.1465
ILE 329MET 330 0.0001
MET 330PRO 331 -0.0150
PRO 331ASN 332 -0.0000
ASN 332ILE 333 0.0830
ILE 333PRO 334 0.0002
PRO 334GLN 335 -0.1217
GLN 335MET 336 0.0000
MET 336SER 337 0.0497
SER 337ALA 338 -0.0002
ALA 338PHE 339 0.0805
PHE 339TRP 340 -0.0003
TRP 340TYR 341 0.0618
TYR 341ALA 342 -0.0005
ALA 342VAL 343 0.0159
VAL 343ARG 344 -0.0002
ARG 344THR 345 0.0185
THR 345ALA 346 0.0000
ALA 346VAL 347 -0.0490
VAL 347ILE 348 0.0002
ILE 348ASN 349 0.0336
ASN 349ALA 350 0.0001
ALA 350ALA 351 -0.0592
ALA 351SER 352 0.0005
SER 352GLY 353 -0.0067
GLY 353ARG 354 0.0001
ARG 354GLN 355 -0.0095
GLN 355THR 356 -0.0001
THR 356VAL 357 0.0375
VAL 357ASP 358 -0.0004
ASP 358GLU 359 0.0000
GLU 359ALA 360 0.0002
ALA 360LEU 361 0.0118
LEU 361LYS 362 0.0003
LYS 362ASP 363 0.0769
ASP 363ALA 364 -0.0002
ALA 364GLN 365 -0.0782
GLN 365THR 366 -0.0000
THR 366ARG 367 0.0792
ARG 367ILE 368 0.0001
ILE 368THR 369 -0.0688
THR 369LYS 370 -0.0004

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.